Puntigrus tetrazona (Sumatra barb): 122323508
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Entry
122323508 CDS
T08985
Symbol
vars2
Name
(RefSeq) valine--tRNA ligase, mitochondrial isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122323508 (vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ptet01007
]
122323508 (vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptet03016
]
122323508 (vars2)
Enzymes [BR:
ptet01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
122323508 (vars2)
Amino acid related enzymes [BR:
ptet01007
]
Aminoacyl-tRNA synthetase
Class I (U)
122323508 (vars2)
Transfer RNA biogenesis [BR:
ptet03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122323508 (vars2)
Prokaryotic type
122323508 (vars2)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
122323508
NCBI-ProteinID:
XP_043073311
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All DBs
Position
19:complement(6672539..6696368)
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AA seq
1112 aa
AA seq
DB search
MQVNAGMQMTAVTVLMGVDCKLHVTSVESFSVKHSRFRDMWMAVHVASPRVWSRDLQKAW
STWGCRLCSQSSSSTQSSQNPRTQAEKAKRRQAREKAILSGDASGPGLIWSDKEKITYTA
ALVPGEKKDTSLPFPQSYSPEYVEFGWYQWWEKQGFFRPEQHSKQPHAVDKYFSLCIPPP
DVTGTLHLGHALTVAIEDALARWRRMQGYKVLWVPGCDHAGIATQSVVERKLMREQGKCR
RDYSREEFLNQVYRWKDEKGDEIYHQLRKLGSSLDWNRACFTMDPGFSSAVTEAFVRLCD
SGLIYRSEGLVNWSCALESAISDIEVDSMDLSGRTLLSVPGYQQKVEFGIMLTFAYPLEG
QGGEVAVSTTRPETMLGDVAIAVHPDDPRYKDLHGKHCRHPFTERLLPIVTDSIVDMTFG
TGAVKVTPAHDHTDFLLSQRHSLPRLTVIGGDGAMTSDCGQWLEGVKRFDARERVITALM
ERKLFRGKKDHPMSLPICSRSGDVIEPLLKKQWFVRCQEMGRKAVQAVEEGELQIIPHFY
TKMWKSWLSNIGDWCISRQLWWGHQIPAYRVTVDNSKDTEEQEQWVWGRSAAEARQRAAV
KFGVNPDAITLTQDPDVLDTWFSSGLFPFAMLGWPQQTEDLRQFYPNSILETGSDLIFFW
VARMVMLGRELTGQLPFKQVLFHSLVRDKYGRKMSKSLGNVIDPLDVISGVSFERLQEKV
KEGNLDPRESVVAMEAQKKDFPKGIPECGTDALRFALCSYKAQGEDISLSVSHVLGCRHF
CNKMWQTVRFTLAMLHDASLPTPLAETHPLSSMDKWICSRLYSTVQQCERGLENYELHMV
TSALHSFWLHSLCDVYLESIKPLLKGEGSGCEEQRAGERQAAMSVLYHAVSVSLTLLSPF
MPFLTEELWQRLLPYANSDGTPRSLCVQPYPKTSQLEHWCFPKEEADFSLVQEVVRVARL
LRAQCQLTKERPELWAVCAPDQAETLLRFRSAICTLGRISAFHLHCPEAGLSDSPALPKA
RAVGTVDHSICLYLSIQNAINADKQGALLSQRREKLASKLKQALAHTQMPNYAEEVPHRV
RQKTEKKIAAMELELKNTEDQLLALEDTRKEV
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgaatgctgggatgcagatgactgcagtgacggtcctgatgggggtcgactgt
aaactgcatgtgacatcggtggagagcttcagtgtgaaacactccagatttcgggacatg
tggatggctgtgcatgtggcatcacccagagtctggagcagggatcttcagaaggcctgg
agcacatggggatgcagactctgctctcaaagctcatctagcacgcagtcttcacagaat
cccaggacacaagcggagaaagccaaacgcagacaagcacgggagaaggccatactcagt
ggtgatgccagtggtcctggactaatttggtcagataaagagaaaataacgtacactgct
gcccttgttcctggagaaaagaaagacacctctctgccctttccacaatcctacagccct
gaatatgtggagtttggctggtatcagtggtgggagaaacagggattcttcaggcctgag
cagcatagtaaacagccccatgctgttgataaatatttctccttatgtattccaccgccg
gacgtgaccggcactttacatctcgggcacgcgctgacagtggctatagaagatgctttg
gctcgctggcgacggatgcagggctacaaggtcctctgggttcccggctgtgaccatgct
gggatcgcaacacagtcagtggttgagaggaagctgatgagggagcaggggaagtgcaga
cgggactacagtagagaggagttcctcaaccaggtctacagatggaaagatgaaaagggg
gatgaaatttatcatcagctgagaaaacttggttcatctcttgactggaacagagcatgt
tttacaatggatccgggtttcagcagtgctgtgacggaggcctttgtcaggctgtgtgac
tctgggctcatctatcgctctgaaggtctggtcaactggagctgtgctttagagtcggcc
atctcagacatcgaggtggactctatggatctctcgggcaggactcttctgtccgttccc
ggttatcagcagaaagtggagtttgggatcatgcttacatttgcttatccactggaggga
cagggaggagaggttgcggtttcaaccacacgtccagagacgatgctgggagacgtggct
attgctgttcatcctgatgaccctcgatataaagatcttcatggcaaacactgcaggcat
ccattcacagagcgcttattacccatcgtcactgactccatagtggatatgacttttggc
acaggtgctgttaaagtgacaccagctcatgaccacactgacttcctgctgtctcagaga
cactcactccctcgcctcactgtgattggaggagacggggctatgacctcagactgcggc
caatggctagagggtgttaagcgatttgatgccagggaacgtgtaattactgctctgatg
gagaggaagctgttcagaggaaagaaggatcatcccatgtcattacccatctgcagtcgt
tctggagatgtcattgaaccgttgctgaagaaacagtggttcgtgcgctgtcaggaaatg
ggcagaaaagcagttcaagcggtggaagaaggagagctacagataattcctcacttttac
acaaaaatgtggaagagctggctgtccaacatcggcgattggtgtatttccagacagctt
tggtggggtcaccagataccggcctatcgagtgaccgtggacaactcaaaggacacagag
gagcaggagcagtgggtttggggcagaagtgctgcagaggcccgacagcgtgccgctgtg
aagtttggggtcaatcctgacgccatcacactcacacaggacccagatgtgcttgatacc
tggttctcttctggtctcttcccgttcgcgatgctcggctggcctcagcagacagaagac
ttgagacagttctaccccaattccattctggaaacaggaagtgacctcatcttcttttgg
gtggccaggatggtgatgctaggcagagagttgacgggccagctgccctttaaacaggtg
ctctttcactctctggtgagagataaatatgggcggaagatgagtaaatccttaggaaac
gtcattgatcctcttgatgtcatctcaggggtttcttttgagagacttcaagagaaagtc
aaagaaggaaacttggatccgagggaaagcgttgttgccatggaagcacagaagaaagat
ttccccaaagggattcctgagtgcgggacggatgctttgaggtttgcactctgctcttat
aaagcccagggagaagatatcagcctgtctgtgtctcatgtgctgggctgtagacatttc
tgtaataagatgtggcagacagtgcgcttcaccctcgccatgctgcatgatgcaagttta
ccgacaccattagcagagacccatcctctatccagcatggacaagtggatctgttcacgt
ctgtacagcaccgtgcagcagtgtgagaggggtttggagaactacgagctccacatggtc
acatcggcactgcactctttctggctgcacagtctgtgtgatgtctacctggaaagcatc
aagccgctgttgaaaggtgaaggctctggttgtgaggaacagagagctggagagaggcag
gcggccatgtctgtgttgtatcacgccgtgtccgtctctctcacgctcctctcacccttc
atgccgttcctcacggaggagctgtggcagagactcctgccttacgctaactctgacggg
acgccccgcagcctgtgtgtgcagccctacccaaagacatcacagctggagcactggtgt
tttcctaaggaggaggctgacttctctttggttcaggaagtggtcagagtggcgaggtta
ctgagggcccagtgccagctgacgaaggagagacccgagttgtgggcggtgtgtgcaccg
gaccaggccgagacgcttctgcgcttcagatcagcgatctgcacactgggccggatctca
gcgtttcatctgcactgtccagaggcgggtttgagcgactctcctgctctgcccaaggcc
agggctgtagggacggtggatcactccatctgcttatatctcagcattcagaatgctatt
aatgctgacaaacagggagctctcctctctcagcgcagagagaagctggcctccaaacta
aaacaagccctcgctcacacccagatgcccaactatgcagaagaagtacctcatagagtc
agacagaagacagagaaaaagattgcagccatggagctggagctgaagaacaccgaggac
caacttttggctttggaagacacgaggaaagaagtctaa
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