Puntigrus tetrazona (Sumatra barb): 122323544
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Entry
122323544 CDS
T08985
Symbol
vav3b
Name
(RefSeq) LOW QUALITY PROTEIN: guanine nucleotide exchange factor VAV3b
KO
K05730
guanine nucleotide exchange factor VAV
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04510
Focal adhesion
ptet04517
IgSF CAM signaling
ptet04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122323544 (vav3b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122323544 (vav3b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
122323544 (vav3b)
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
CAMSAP_CH
SH3_2
CH
SH3_1
SH3_9
SH2
SOS1_NGEF_PH
PH
C1_1
RHG20_PH
CDC24
Filamin
LZ3wCH
Dip
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
122323544
NCBI-ProteinID:
XP_043073378
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Position
2:8890773..8929310
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AA seq
854 aa
AA seq
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MEYWRQCSLWLINCKVLPRNHRVTADSAQVFDLAQTLRDGVLLCQLLNNLRPDTINLKEI
NLRPQMSQFLCLKNIRTFLSACCESFGMKKSELFXAFDLFDVRDFGKVIDTLSKLSHMPF
AQQKGIKPFPTEESTENEDIYIHLADLIDEELEEDVYDPVYGDVEGGEVYEDLMRTEAAA
SKAKQAEVDIRSCCLLEIKQTEAKYTETLETIEKYFMIPLIKFISATEIDKIFINIPDLV
KVHKSLLAEIQDSVQNKNAENLHQIFIIYKDRLLLYGKYCSHVESAISLLDFICKEKEGV
RLKLEECSKRANNGKFTLRDLLVVPMQRVLKYPLLLQELLKYTSDDTEKSKLRLALDAMR
DLAQYVNEVKRDVETLREIDQYQRSIENLNQCLLSYGRPKGDGEVRLVSNVDKRRQDRHI
FLFDVAVIVCKRRGDNYEMKDVIDLNHFKISNNPTTDKDCRKWCYGFYLTHQQGQSGFEF
LFKTKELKKKWLDQFEMAISNIRPENATFNSHHFRMHTFERATSCSSCHMLLRGIFNQGY
LCPKCGNGAHKGCLGKLGACGRAGAAVQKPERKTTPRKQEDQGLPKMLVIRGYFGVRSPP
GRPPLNAQIGDVIEVIYADPHSSWWEGKILTTQETGFFPSDAVKPCPCVPRTVDYSAQPW
FAGPMERHHAESELVERENSTYLVRYRSRESREYAISIKYNNDVKHIKILTKEGSFYIAE
SRTFKTVLGLVEYYKQHSLKEGFRTLDTTLQVPYKELGSGVTPAAPVLCGLSVLSPTSYS
FVPPSPSPFWSVLTPRVLGIALARYDFSSRDTRELSLQVGDLVKIYIKCASGWWKGEVNG
QVGWFPSTYVEEEE
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggagtactggaggcagtgcagcttgtggctcatcaattgtaaagttttgccccggaat
catcgggtcacggcggattcggcgcaggtttttgatttggcccaaactcttcgggatggg
gtgcttctgtgccagctgctgaacaatctcagacccgacaccattaacctaaaagagatc
aatctcagaccacagatgtcacagttcctttgcctgaagaatattcgtacattcttgtct
gcgtgttgtgaatcatttgggatgaagaagagcgaactgttcnaagccttcgatctcttc
gacgtccgagattttggaaaggtcattgacaccctatcaaagctctctcatatgcctttt
gcacaacagaaaggaatcaagccatttcccacagaggaaagcactgaaaatgaagacata
tatatccatttggctgatcttattgacgaggaactggaggaagatgtttatgaccctgtg
tatggagatgtggagggaggagaggtctatgaggatctgatgaggacagaggctgctgcg
tctaaagcgaaacaggccgaggtggatatcagaagctgctgtcttctagagatcaaacag
acagaagccaaatacactgagaccctggagaccattgagaagtactttatgattccactg
ataaagttcatctcggcaacagaaattgacaagattttcatcaatataccagacctggtt
aaagtgcacaaaagcctgttggctgagattcaagactctgttcaaaataaaaacgcagaa
aaccttcaccagatcttcattatttacaaagacaggcttctgctttatggaaaatactgc
agtcacgtagaatcagccatttctctgctagacttcatctgtaaggaaaaagagggcgtc
cgactgaaactagaggaatgttcaaagagagccaacaatgggaaattcactttgagagac
ttgcttgtggttcccatgcagcgcgtgctgaagtacccgctactgcttcaggaattgctt
aaatataccagtgatgacacagaaaagagcaaactacgattagcccttgatgccatgaga
gacttagcccagtatgtaaatgaggtgaaaagagacgttgagactctgagggagatcgat
cagtatcagagatccattgagaatttgaaccagtgcttactttcttatggaagaccgaag
ggtgacggtgaagtccgtttggtgtcgaatgtggacaaacgcaggcaggacagacatatt
tttttgttcgacgtcgctgtgattgtttgcaagaggcgcggggacaactatgagatgaag
gacgtgatcgacctcaaccatttcaagatctctaataaccccactactgataaggactgc
agaaagtggtgctacgggttctacctcactcaccagcaggggcagagtggatttgagttc
ctgttcaagacaaaagagctgaagaagaaatggctggaccagttcgagatggccatatct
aatattcggcctgagaatgccacttttaactctcaccacttcaggatgcacactttcgag
agggctaccagctgcagctcctgtcatatgcttctccggggaatttttaaccaaggctac
ctttgtcctaaatgcggaaacggggctcataagggttgtcttggaaaactaggagcctgc
ggaagggcaggtgctgctgtccaaaaaccagagagaaagacaacacctaggaaacaagaa
gaccaaggtttgccaaaaatgcttgtcatcagaggctattttggggttcgcagtcctccg
ggcagaccgccgctcaatgctcagattggtgatgtcatagaggtcatctatgccgatcct
cacagctcctggtgggagggcaaaatactgacaacgcaagagactggcttctttccaagt
gatgcagtcaaaccctgcccatgtgtaccaaggacagtcgactattcagctcagccctgg
tttgccgggcccatggagaggcaccacgcagagtctgagcttgtggagagagagaacagc
acctacctggtgcgatacaggagcagggagagcagagagtatgctatcagcatcaagtac
aacaatgatgtaaagcacattaaaatcctcaccaaggagggcagcttctacattgctgaa
agcaggacgttcaagactgttttaggactggttgagtattataaacagcactctctgaaa
gagggttttcgtactctggacactactttgcaggtgccctataaagagcttggtagtgga
gtcacacctgctgctccagtgctgtgtgggctttccgttttgagtcccaccagctacagt
tttgttcctccctccccctcacccttctggtcagttttgaccccgagagtgcttggcatt
gcactggcacgatacgatttcagctccagagatacaagggaactctctctgcaggtgggc
gacctggtgaagatctatatcaagtgtgccagtggatggtggaaaggtgaagtcaatggc
caggtgggatggttcccttcaacttatgtcgaggaagaggagtga
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