Puntigrus tetrazona (Sumatra barb): 122323561
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Entry
122323561 CDS
T08985
Symbol
sdc3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04514
Cell adhesion molecules
ptet04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122323561 (sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122323561 (sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ptet00535
]
122323561 (sdc3)
Proteoglycans [BR:
ptet00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
122323561 (sdc3)
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Gene cluster
GFIT
Motif
Pfam:
Syndecan
TGF_beta_GS
Motif
Other DBs
NCBI-GeneID:
122323561
NCBI-ProteinID:
XP_043073407
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Position
19:13309427..13333568
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AA seq
412 aa
AA seq
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MELPCWMALALLLLAQTALAQRHYYRPSDDESSGDGFFDDEDLFSGSGSGFPDMDVSPTA
ASVAVTTEEPLPLSTTQATGPAPSASPAAEPSSPPPPEVERESGLGQDVDKESKLEREIE
KKWEELEEEELESKITTTGLDADKVQEGEEEQERSKATVAPRLTDVPLVFVDSSTALDET
TVATSDPEDLAATEEEEDLYITTETMMLEASSTQETTTDDITTTEVISTTVASTTAKPTR
PRPAPTTPSTAPVRPRRPHTTPSRAVPTESNTRSAMTTTQTQTPDETVNNEVAGPSPSGD
FEIRENEGRQGNEVRRGKVEPGVAGEPDLTGNTVDAAGSSAAQLPQKNILERKEVLIAVI
VGGVVGALFAAFLVMLLVYRMKKKDEGSYTLEEPKQATVTYQKPDKQEEFYA
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggagctcccgtgctggatggcgctggcgctgctgctgctggcgcagaccgcactggca
cagcgtcactattatcgaccaagcgatgatgagagttctggagatggatttttcgatgat
gaggacttattctccggatccggctctggctttccagatatggacgttagtccaactgca
gcaagtgtggcggtcactacagaagagcccctcccactttccaccacgcaggccactggc
cccgccccctcggcctcccctgccgctgagccaagtagcccacctccacctgaggtggaa
cgcgagagcggcttgggacaagatgtagacaaagaaagcaaactggagagagagattgag
aaaaagtgggaggaacttgaggaggaggaactggaatcaaagattacaacaacagggttg
gatgccgataaagtgcaagaaggagaggaggaacaagagaggtcgaaagctacggttgcc
ccccgactgactgatgttcctctagtgtttgtggactcatctactgctctggatgagacc
acagtggccactagtgacccggaggacctcgccgccacagaagaagaggaggatctatac
attacgacagaaaccatgatgttagaggcatccagcacacaagaaacgacaacagatgac
attacaacaaccgaggtcatctcaaccaccgtagcgtccaccactgctaagccaaccaga
ccacgtcctgccccgaccaccccgagcaccgccccggtacgaccccggagaccacacact
acccccagcagagccgtcccgactgagagcaacacccgttcagcgatgaccacgacgcag
acacaaacaccagatgaaactgtaaataatgaagttgcaggaccaagtccaagtggtgat
tttgaaatccgcgagaatgaaggtcgccaaggcaacgaggtcaggagaggcaaagtggag
cccggcgtggcgggagaaccagatctgactggaaacacagtagatgctgctggaagctca
gctgctcaacttccacagaagaacatccttgagaggaaggaagttttgatagcggtgatt
gtcggaggtgtagttggagcactcttcgcagcattcctcgtaatgttactcgtgtaccgg
atgaaaaagaaagatgaaggcagctacacgttggaggagcctaaacaagccaccgtcacc
taccagaaaccagacaagcaggaagagttctacgcctaa
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