Puntigrus tetrazona (Sumatra barb): 122323580
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Entry
122323580 CDS
T08985
Symbol
rab5aa
Name
(RefSeq) RAB5A, member RAS oncogene family, a
KO
K07887
Ras-related protein Rab-5A
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04137
Mitophagy - animal
ptet04144
Endocytosis
ptet04145
Phagosome
ptet04148
Efferocytosis
ptet05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122323580 (rab5aa)
04145 Phagosome
122323580 (rab5aa)
04137 Mitophagy - animal
122323580 (rab5aa)
04148 Efferocytosis
122323580 (rab5aa)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122323580 (rab5aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122323580 (rab5aa)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptet04147
]
122323580 (rab5aa)
04031 GTP-binding proteins [BR:
ptet04031
]
122323580 (rab5aa)
Membrane trafficking [BR:
ptet04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
122323580 (rab5aa)
Endosome - Lysosome transport
122323580 (rab5aa)
Exosome [BR:
ptet04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122323580 (rab5aa)
Exosomal proteins of other body fluids (saliva and urine)
122323580 (rab5aa)
Exosomal proteins of colorectal cancer cells
122323580 (rab5aa)
Exosomal proteins of bladder cancer cells
122323580 (rab5aa)
GTP-binding proteins [BR:
ptet04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
122323580 (rab5aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
MMR_HSR1
GTP_EFTU
RsgA_GTPase
AAA_16
MCR_beta
Motif
Other DBs
NCBI-GeneID:
122323580
NCBI-ProteinID:
XP_043073439
LinkDB
All DBs
Position
19:16096498..16101965
Genome browser
AA seq
216 aa
AA seq
DB search
MANRGGATRPNGSNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQ
RQASPNIVIALSGNKADLANKRAVDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAK
RLPKNEPQAAGANSGRSRGVDLTETAQPTKAPCCSN
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggccaataggggaggagcaacacgccccaacgggtccaacgcgggcaataagatctgc
cagtttaaactggtcttgctaggagagtcggctgtgggaaagtccagcctcgtactgcgc
ttcgtcaaagggcagtttcatgagtttcaggaaagcacaataggagcggccttccttaca
cagacagtgtgcttggatgacacaacggtaaagtttgagatttgggacacagccggacag
gagcgctaccacagtttggcccctatgtactatagaggggcccaggctgccattgtagtt
tatgacatcaccaatgaggagtcgtttgcaagagcaaagaactgggttaaggagcttcag
aggcaggccagtccgaatattgtcatcgcgctgtctgggaacaaggctgaccttgccaac
aagagagctgtggacttccaggatgctcagtcttatgcagatgacaacagtttgttgttc
atggagacgtcagcaaagacttccatgaatgtcaatgagatcttcatggccattgcgaaa
aggttgcccaagaatgagccccaagccgccggagccaacagtgggcggagtaggggcgtg
gacctcacagagacagcccaacccactaaggccccctgctgcagtaactaa
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