Puntigrus tetrazona (Sumatra barb): 122323728
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Entry
122323728 CDS
T08985
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04145
Phagosome
ptet04814
Motor proteins
ptet05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122323728
09142 Cell motility
04814 Motor proteins
122323728
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122323728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptet03036
]
122323728
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ptet04812
]
122323728
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
122323728
Cytoskeleton proteins [BR:
ptet04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
122323728
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
WD40
Beta-prop_EML
Beta-prop_WDR5
WDR55
Dynein_IC2
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_SPT8
CCD97-like_C
Motif
Other DBs
NCBI-GeneID:
122323728
NCBI-ProteinID:
XP_043073732
LinkDB
All DBs
Position
19:12569233..12621020
Genome browser
AA seq
630 aa
AA seq
DB search
MADKSDLKAELERKKQRLAQIREEKKRKEEEKKKKESETQQKAEAAPEDSDLDRKRRETE
ALLQSIGISPEPPLVPTPMSPSKSMSTPSETGSQDSVDGAAAGRYRTLQWDTDPSVLQLQ
ADSELGRRTHRLGPSKITQVDFLPREVVSYCKETQTPLAAHQSEEDEEEDEEVTEMKAGP
ENDLQEEEESKETKEGHPRELTEEEKQQVLHSEEFLIFFDRSIRVMERALAEDSNIFFDY
SGRDLEDKEGDLQGGSSLSLNRLFYDEHWSKHRVITCLDWSPQYPELLVASYNNNEDAPH
EPDGVALVWNMKFKKTTPEYIYHCQSPVVSVGFARFHPNLLVGGTYSGQIVLWDNRSHRR
TPVQRTPLSAAAHTHPVYCVNVVGTQNANNLITVSTDGRMCSWSLDMLSQPQESMELVYN
KSKPVAVTGMAFPTGDVNNYIVGSEEGTVYTASRHGSKAGICEMFEGHQGPVTGISCHSA
VGPVDFSHLFVTSSFDWTVKLWSTKQNKPLYSFEDNADYVYDVMWSPVHPSLFAAVDGMG
RLDLWNLNNDTEVPTASVTVEGAPALNRVRWASGGKEVAVGDSEGRVWIYDVGELAVPHS
EDWARFGRTLMEIRANRGDGEEEGPVELAT
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagagtgacctgaaagccgaacttgagcgcaagaaacagcgccttgctcaa
atcagagaggaaaaaaagaggaaggaggaagaaaaaaagaaaaaagagtcagagacccaa
cagaaagcggaagctgctcctgaggattcagacttggaccgcaagcgcagggagaccgag
gccctcctccagagcattggaatctcacccgaacctccattagtcccgacaccaatgtcc
ccatcaaagtcaatgagcacacccagcgagacaggcagccaggactctgttgacggagcc
gctgctggcagatataggaccttgcagtgggacactgacccctctgttcttcagctgcag
gctgactctgagctcggacgtcgaacgcacagattgggaccttctaagataactcaggtg
gatttccttcccagagaggtggtgtcttactgtaaagagactcagacgccgctagcagct
catcagtctgaagaagatgaagaggaggatgaagaggtcacagaaatgaaagctggccca
gaaaatgacctgcaggaggaggaagaaagcaaggaaacaaaggaaggccacccgcgggag
ctgacggaggaagagaaacagcaggttttgcactcagaggagttcctcatcttcttcgac
cgcagtattcgcgtgatggaaagagctttagctgaggactccaacatcttcttcgactac
agcggccgggacctggaggataaagaaggggatctgcaaggtggctccagtctctctctc
aatcgtctgttctatgatgagcactggtcaaagcatcgggtcatcacctgtctggactgg
tcccctcagtaccctgagctcttggtggcctcctacaacaacaatgaagatgctcctcat
gagccagacggtgtggctttggtgtggaatatgaaattcaagaagaccacaccggagtac
atctaccactgccagtctccagtggtgtccgtgggttttgctcggtttcatcctaacctg
ttggtgggaggcacgtactcggggcagattgttctctgggacaaccgaagtcacagaaga
acaccagttcagaggacccccctgtctgctgcggcacacacacaccctgtctactgcgtc
aatgtggtcggcactcaaaacgccaacaacctgatcactgtgtccacagacggccggatg
tgctcctggagcctggatatgctttcacagcctcaggagagcatggagcttgtttataac
aagtctaagccagtggctgtgactggaatggccttccccactggagacgtcaataattat
atagtaggcagtgaggagggaacagtgtatacagcgtccagacatggcagtaaagctgga
atctgtgagatgtttgagggccaccaggggccagtgacaggcattagttgtcacagtgct
gtgggccctgttgatttctcccacctctttgtcacctcctcttttgactggactgtaaaa
ttgtggagcacaaagcaaaacaagccgctgtactcctttgaggataacgcagactacgtc
tacgatgtgatgtggtcccccgtgcacccctcgctcttcgccgccgtggacggtatgggt
cgtctggatctgtggaacttgaacaacgacactgaggtgcccaccgctagcgtgacagta
gaaggagcccccgctctgaaccgcgtcagatgggcctctgggggcaaagaggtcgctgtg
ggagactcagagggacgtgtgtggatatacgacgttggagagctggccgtgccccacagt
gaggactgggcccgtttcggccgcacgctgatggagatccgtgccaaccgcggggacggt
gaggaggaggggcccgtggagctggccacgtaa
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