Puntigrus tetrazona (Sumatra barb): 122323756
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Entry
122323756 CDS
T08985
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122323756 (vps50)
Membrane trafficking [BR:
ptet04131
]
Protein recycling
Others
EARP complex
122323756 (vps50)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
122323756
NCBI-ProteinID:
XP_043073789
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Position
19:12264953..12367049
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AA seq
990 aa
AA seq
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MQKIKSLMARQGLKSPQESVADMSPVESFRTPSKEELRELREQPTDPQAEQEIIDSIEEV
YFSGDSFDMVQYELEKLPPDLNLLELEEYRDKLKRQQAAVSKRVADLILEKQPSYVKELE
RVTSLQTNLQLAAVICTNARRQLRSAKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYNCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTKVQLAYKLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITTDSYIPCLTDLCKALWEVMLSYHLTMQWHDEHYKEEEATPGAD
DSSAEGSDESNVGRSYVKKKLEHGLTRIWQDVQLKVKAYLLGTDVSNFKYDDFIVVLDVI
SRLMQVGEEFCGSKSELLQESIKRQSVNYFKNYHRTRLEELRMFLENETWELCPVKSNFS
IAQLHEFKFMGQCRSPSVSPSRQPESTEMMELSLFEQYLQGGNPFERQIDNKEEETEDVL
ASNGYESDELEKSVYQDYDSDSDVPEELKQDYVDEQTGDAPVKSVSRETLRSRKRSDYNL
NRANAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRNDM
HFQSASLPSQGSQPGASRQVVPIYWYESSGLGLISSRLRTTLSRIQESLIDVEAGGENAG
PHASPEERKEKVPSPHLSQLVVLTASDTLYGLAERVVATESLVFLAEQFEFLQPHLDTMM
PSAKKPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLLMAGVKWDIKEIMSQHNV
YVDVLLKEFEKFNQRLGDVSKIVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSNEGR
ALMQLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQLTN
LVNVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatcaagtctttgatggcccgtcagggtctgaagagtcctcaggagagtgtg
gcggacatgagccctgtggagagcttcaggacccccagcaaggaggagctgagggaattg
agagagcaacccaccgatccacaggcagaacaggaaatcattgatagcatagaggaagtg
tacttctccggtgactccttcgacatggtgcaatacgagcttgagaaactccctccggat
ctgaaccttctggagctcgaggagtatagagataagctaaaaagacaacaagcagccgta
tctaaaagagtggcagaccttattttggagaaacagccttcctatgttaaggagctcgaa
agagtgacgtctctgcagaccaacttgcagctggctgctgtcatctgcactaatgcacgg
aggcagcttcgttctgctaaagaaggcttcactgaagccagtctggggctgttagccaat
cagagacgacggcagctgttgacaggattgttgaagtctttgaggaccataaagactctg
caaagaaccgatgttcgactgagtgaaatgctggaggaggaggactatccaggcgccatc
cagctgtgtttagaatgccagaaggctgccagtactttcaaacactacaactgtataagc
gagttgaattccaagttgcaagacactctggagcaaatcgaggaacagctcgacgtggca
ctgtcgaaaacctgcaagcactttgatgtttctcactacaccaaagttcaactggcatat
aagctgctgggcaagacacagacggccatggatcagctgcacatgcatttcactcaggcc
atccacaacactgtcttccaggtggtgctgggatacgtagagttgtgcgccggcaacgcc
gacaccaagttccagaagatgcaatacaaggacctttgcacgcatattactacagacagc
tacatcccctgcttgactgacctctgcaaggctttgtgggaagtgatgctcagttaccat
ctgaccatgcagtggcacgatgagcactacaaagaagaagaggcgactcctggagcggat
gattccagcgcagagggctcagacgaatctaacgtgggtcgcagctatgtgaaaaagaag
ctggaacatggcttaacgcggatctggcaggacgtccaattgaaagtgaaagcctatttg
ttgggaacagacgtgtccaacttcaagtatgacgatttcattgtggttctggatgttatc
agcaggttgatgcaggtgggagaggaattctgcggcagcaagtctgagcttttgcaagag
tctattaagagacagagtgtaaactattttaagaactatcacagaactcgcctagaggag
ttgcgaatgtttcttgaaaatgaaacatgggagttgtgccctgtgaagtccaacttcagt
attgcccagcttcacgagttcaagttcatgggtcagtgtcgttctccttcagtatctccc
agcaggcagccggaatccacagagatgatggagctctctttgtttgagcagtacctacag
ggaggaaatccttttgagaggcagatagacaataaggaagaggagacagaggatgtcctg
gcttctaatgggtatgagtcagatgagctggaaaagagtgtgtatcaggactacgacagt
gacagtgatgtacctgaggagctgaaacaagactatgtagatgaacagacaggagacgct
ccagtgaagagcgtgtccagagagacacttcgcagccggaaaaggtctgactacaatctg
aaccgagccaatgcccccatccttaccaacaccaccctcaacgtgattcgcctggttgga
aaatacatgcagatgatgaacatcctgaagcccatcgcctttgatgtcatccactgtgtg
tctcagctctttgattattacctttatgccgtctacaccttctttggccgcaatgacatg
cacttccaatctgcatctctgccttcacaaggctctcaacctggtgcgtccagacaggtg
gttcctatctactggtatgaatcatctggactgggtttgatcagcagcagactgaggacg
acgctcagccgaattcaggagagcctaatagacgtggaggccggaggggagaacgcaggt
ccacacgcgtctcctgaggaaaggaaggagaaggtcccgagtcctcatctcagtcagctg
gtggtcctgacagctagtgatacgctttatggcttggctgagagagtcgtcgccactgaa
tcactagtttttctggcagagcagtttgagttcctccagcctcatctcgacaccatgatg
ccttcagccaagaagcccttccttcagcagttctactcacagactgtatctacagccagc
gagctccgcaaacccatttactggatagtggcggccaaagccatagattacgaacagatg
ctgttactgatggcgggagtgaaatgggacattaaagagataatgtcacagcacaacgtc
tatgtggatgtccttttaaaggagtttgagaagtttaaccagagactgggagatgtgtcg
aaaatagttcggattcctctgcctgtgtccaatgtcttatgggagcactgcatccgtctg
gccaacaggacattagtggagggctatgcaaatgtgaagaaatgcagtaatgaaggacgt
gcgctgatgcagctggacttccagcagttcctgatgaagctggagaagctcaccgacctc
agaccaattccagacaaggagtttgtagagacctacatcaaggcatactaccttaccgag
aacgacatggagcagttcatcaagaaccacagggagtactccatgaagcagctgactaac
ctggtcaacgtctgcctcggctcccacatcaacaagaaagcgcgacagaaactcctcgca
gctatcgatgacattgaccggccgaaaagataa
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