Puntigrus tetrazona (Sumatra barb): 122324066
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Entry
122324066 CDS
T08985
Symbol
cnot3b
Name
(RefSeq) CCR4-NOT transcription complex subunit 3b
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122324066 (cnot3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122324066 (cnot3b)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122324066 (cnot3b)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
122324066 (cnot3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
122324066
NCBI-ProteinID:
XP_043074190
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Position
19:17298852..17315329
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AA seq
888 aa
AA seq
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MADKRKLQGEIDRCLKKVAEGVEQFEDIWKKLHNAANANQKEKYESDLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKIVERETKTKAYSKEGLGLALKVDPAQKE
KEEVGQWLANTIDTLNMQVDQFESEVESLSVQTKKKKGDKEKQDRIEELKRMIERHRYHI
RMLETILRMLDNDSVQVDAIRKIKDDVEYYLDSSQDPDFEENEFLYDDLDLEDMPQPLVA
TSPGHTEDEIFQHSSSTPTSTTSSSPIPPSPATCTTNSEDDKKRGRSTDSEISQSPIKNG
NPSSSLSSSSSLSSSSSGASSNSLISMATVASSISSASGSSSLLGSMGGPLQNSGSYSSA
TQQQTQQSQQQHQPKNLVSSLSNAISASSSNCTLLPTSTSTSPPNTSTPGPLTPSSQSQP
PLGMGLSSSLGLGKVTSVTSGTNHIPGLVLSGMPASLSNITGFLSGSTPAPYAQAAAAGC
VGSGLSASIGTNISSTNSSGVVTSVGTNGSLGSTSLLSSGTGVLGLGSTQSVVEPLPLVA
PSSVGGTLTSGSNVGVIGSNGGTSGTGSAVGSAVLPRPPSGPKQNGGTSYSAVVADSTSD
SALTSASQSQNSQSSSLNSSTNQPKDSGSSLLGSITLPPSSPSPSYSESKAGGGSLLNGP
HSYTQAADTIKPQEPLSSLKSMAERVAQGSGLEGELSALHISNDIFPSSTAPSGTPAAPQ
SALSEVSIPPSLGVCPLGPVPLSKEQLYQQAMQESAWTHMPHPSDSERIRQYLMRNPCPT
LPFHHQVPPPHSDTVEFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMW
FQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaaagaaaacttcaaggtgaaatagacagatgtttgaaaaaagttgcagaa
ggggtagagcagtttgaggacatttggaaaaagctccacaatgcagccaacgccaaccaa
aaagagaaatatgaatctgacctcaagaaagagattaaaaaactacagcgtctccgtgac
cagattaagacatgggtcgcctccaatgagatcaaagacaaaaggcagctagtagagaat
cgcaaactcattgagacgcaaatggagcggtttaagattgtggaacgggaaaccaaaaca
aaagcatactctaaagaaggactcggcctcgctctgaaagtcgatcctgcgcagaaagag
aaagaagaggttggccagtggctagcgaacacgatagacacgttgaacatgcaagtggac
cagtttgaaagcgaggttgaatcgctttctgtgcagaccaagaagaagaaaggagacaaa
gagaagcaggatcggatcgaggaactgaaacgaatgattgagaggcaccggtatcacatc
cgcatgctggaaaccatccttagaatgctggacaatgactcagtacaagtggatgccatc
cgcaagattaaagatgacgtcgagtactaccttgattcctctcaggatcctgactttgag
gagaatgagtttctctatgatgaccttgatttagaggacatgccccagccactagttgcc
acatctccaggtcacacagaggatgagatcttccagcactccagctccacaccgacctcc
acaacgtcgtcatctcccatacctccctctccagctacttgcactacgaattcggaagat
gataagaaaagaggtcgttcaacagacagtgaaatcagccagtcacctatcaagaatgga
aatccatcttcgtctctatcctcctcttcctcattgtcatcctcgtcctcgggagcctct
tcaaactctttgatctccatggcgactgtcgccagcagcattagctcggcatcagggagc
agcagccttttaggcagcatgggtggcccccttcagaactctggcagctacagttcagca
acccagcaacaaacacagcaatcccaacagcagcaccagcccaaaaacttagtctcctct
ctctccaatgccatctcggcctcctccagcaactgtaccttactcccgacatccacctcc
acgtcaccgcccaacaccagcacaccgggcccactgacacccagctcgcagagccaacct
ccactgggaatgggcctttcctccagtctgggccttgggaaggtgacgtctgtgactagt
ggcacaaatcatattcccggtctggttctttcagggatgccggcatccttgagcaacata
actgggtttttgagcggatccactccggcaccttatgcacaagcggctgccgcaggttgc
gtaggcagcgggctgtcagcgtcgattggaacgaatattagcagtacaaactccagtgga
gtcgtaacctcagtggggactaacggaagtctaggctccacaagcctcttgagctcaggg
actggtgttctgggtcttgggtccacacagtctgttgtggagcctctacctttggtggct
cccagctctgtgggaggcacactgacctcagggagcaacgtgggagttattggaagcaac
ggaggaacctctgggacaggaagtgcagtgggaagcgccgtgctaccacggccacccagt
gggccgaaacaaaacggcggtacaagttatagtgctgtggtagcagacagcacgtcagac
tccgccctcaccagtgccagtcaatcacagaatagccaatcctcatctctaaattcctca
acaaatcagcctaaggacagtgggtccagccttctagggtcaataacactgccgcccagc
tcaccctcaccgtcgtacagtgagagtaaagcaggcggtggcagcctgctgaatggcccg
cactcatacacacaggctgccgacaccatcaagcctcaggagcctctgagctctttaaag
tcgatggcagagagggttgcccagggctcagggttagaaggggagctgtctgcactacat
atctcaaatgatatattccccagttccacggccccttcaggcactcctgcagctcctcag
tctgctctgtcggaagtgagcatccccccatcgctgggcgtgtgtccactgggccccgtc
cccctctccaaagagcaactctaccagcaagccatgcaggagtccgcctggacgcacatg
cctcacccgtccgactcggagaggatcaggcagtacctgatgaggaacccctgcccaaca
ctgccttttcaccaccaggtgccacctcctcactccgacactgtggagttctaccagaga
ctgtctacagagaccctcttcttcatcttttactacttagagggtacaaaagcgcagtat
ctagcagccaaggccttgaaaaaacaatcatggagattccataccaagtacatgatgtgg
ttccagaggcacgaggagcccaagaccatcacagatgagtttgagcaagggacatatatt
tactttgactatgagaaatggggccagagaaaaaaggaaggatttacatttgagtacagg
taccttgaagaccgggacctccagtga
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