Puntigrus tetrazona (Sumatra barb): 122324311
Help
Entry
122324311 CDS
T08985
Symbol
nup43
Name
(RefSeq) nucleoporin Nup43
KO
K14305
nuclear pore complex protein Nup43
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122324311 (nup43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122324311 (nup43)
03036 Chromosome and associated proteins [BR:
ptet03036
]
122324311 (nup43)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122324311 (nup43)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122324311 (nup43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WDR55
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
Beta-prop_EIPR1
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_IFT140_1st
WD_LRWD1
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
Beta-prop_WDR75_2nd
Beta-prop_Aladin
KNTC1_N
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
WD40_CFAP43
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
122324311
NCBI-ProteinID:
XP_043074560
LinkDB
All DBs
Position
20:1574299..1577892
Genome browser
AA seq
371 aa
AA seq
DB search
MDPIAKYISQKISKTRWRPISPALLQQPEVFAAGSWDNESNRVSVWSVGDHGVSSIDGEF
EEEPQLLCDCQHGGDVMDLQFLDQDRLVSASSSGAVTIFKLRSDCQTLSVAHVWERAHRY
PCDDAPCTAVVCRSPELVSVGEDGRVVLYKADQAEVVRVIENADSSTIHAVTFLRTTEVL
TVNSIGQLKMWDFRQQRDSPAQILSLTGDRVPLHCVDKHPNQQHIVATGGQDGMLCIWDV
RQGNTPFSLIEAHSGEMWEVHFHPSNPNHLFTCSEDGSLLHWETTSASDMSTLLKRGWNS
RVVSHSGAPLAGENDSAVSAWLAGDSSKNRLEATHMLPSQTLSVNSLDVLEQCLVCGTDG
EAVYVHRQVPV
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggacccgatagccaaatacatctcgcagaaaatcagcaagacgcgatggcgcccgatt
tccccggctttattacagcagcctgaagtgttcgccgcgggatcctgggacaacgagagt
aacagagtgtcggtctggtcggtgggagaccacggagtctctagcattgacggagagttt
gaagaagagccgcagctgctgtgtgactgtcagcatggcggggatgtgatggacctgcag
tttctggatcaagaccggcttgtttctgcatcttcaagcggggctgtgactatttttaag
cttcggtctgactgtcagacgctgtccgtggctcacgtgtgggagagggctcatcgatat
ccctgcgatgacgcaccctgcactgcagtcgtgtgccgaagccctgaactcgtgtcagtg
ggtgaagacggcagagtcgttctctacaaggcagatcaggcggaagtcgtccgtgtcatt
gaaaacgcagacagcagtacgattcacgcggtgacgtttctgaggacgaccgaggtgctc
accgtgaactccatcggtcagctgaagatgtgggacttcaggcagcagagagacagtcct
gcacagatcctctcgctaactggggacagagtgcctttgcactgtgtggataaacacccg
aaccagcagcacatagtggccaccggaggacaggacgggatgctgtgtatctgggacgtg
agacagggcaatacacccttctctctcatagaggcccattcaggggaaatgtgggaagta
cattttcatccgtcaaatcccaatcacttatttacatgctcggaggacggatctctgctc
cactgggagaccacttcagcgtcagacatgagcacgctcctgaagaggggctggaacagc
agggtcgtctctcacagtggcgcaccgctggcaggggagaatgattctgcggtcagcgcc
tggcttgctggggactccagcaaaaatagactggaggcgactcatatgctaccgagccag
acgctgtctgtgaacagcctcgacgtgctcgagcagtgtttagtgtgcgggaccgatgga
gaggccgtgtacgtccacagacaagttcctgtttga
DBGET
integrated database retrieval system