KEGG   Puntigrus tetrazona (Sumatra barb): 122324311
Entry
122324311         CDS       T08985                                 
Symbol
nup43
Name
(RefSeq) nucleoporin Nup43
  KO
K14305  nuclear pore complex protein Nup43
Organism
ptet  Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ptet00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122324311 (nup43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptet03019]
    122324311 (nup43)
   03036 Chromosome and associated proteins [BR:ptet03036]
    122324311 (nup43)
Messenger RNA biogenesis [BR:ptet03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     122324311 (nup43)
Chromosome and associated proteins [BR:ptet03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    122324311 (nup43)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WDR55 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_WDR36-Utp21_1st WD40_CDC20-Fz WD40_WDHD1_1st WD40 Beta-prop_EIPR1 Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_IFT140_1st WD_LRWD1 EIF3I WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Beta-prop_WDR75_2nd Beta-prop_Aladin KNTC1_N Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th WD40_CFAP43 Beta-prop_SPT8
Other DBs
NCBI-GeneID: 122324311
NCBI-ProteinID: XP_043074560
LinkDB
Position
20:1574299..1577892
AA seq 371 aa
MDPIAKYISQKISKTRWRPISPALLQQPEVFAAGSWDNESNRVSVWSVGDHGVSSIDGEF
EEEPQLLCDCQHGGDVMDLQFLDQDRLVSASSSGAVTIFKLRSDCQTLSVAHVWERAHRY
PCDDAPCTAVVCRSPELVSVGEDGRVVLYKADQAEVVRVIENADSSTIHAVTFLRTTEVL
TVNSIGQLKMWDFRQQRDSPAQILSLTGDRVPLHCVDKHPNQQHIVATGGQDGMLCIWDV
RQGNTPFSLIEAHSGEMWEVHFHPSNPNHLFTCSEDGSLLHWETTSASDMSTLLKRGWNS
RVVSHSGAPLAGENDSAVSAWLAGDSSKNRLEATHMLPSQTLSVNSLDVLEQCLVCGTDG
EAVYVHRQVPV
NT seq 1116 nt   +upstreamnt  +downstreamnt
atggacccgatagccaaatacatctcgcagaaaatcagcaagacgcgatggcgcccgatt
tccccggctttattacagcagcctgaagtgttcgccgcgggatcctgggacaacgagagt
aacagagtgtcggtctggtcggtgggagaccacggagtctctagcattgacggagagttt
gaagaagagccgcagctgctgtgtgactgtcagcatggcggggatgtgatggacctgcag
tttctggatcaagaccggcttgtttctgcatcttcaagcggggctgtgactatttttaag
cttcggtctgactgtcagacgctgtccgtggctcacgtgtgggagagggctcatcgatat
ccctgcgatgacgcaccctgcactgcagtcgtgtgccgaagccctgaactcgtgtcagtg
ggtgaagacggcagagtcgttctctacaaggcagatcaggcggaagtcgtccgtgtcatt
gaaaacgcagacagcagtacgattcacgcggtgacgtttctgaggacgaccgaggtgctc
accgtgaactccatcggtcagctgaagatgtgggacttcaggcagcagagagacagtcct
gcacagatcctctcgctaactggggacagagtgcctttgcactgtgtggataaacacccg
aaccagcagcacatagtggccaccggaggacaggacgggatgctgtgtatctgggacgtg
agacagggcaatacacccttctctctcatagaggcccattcaggggaaatgtgggaagta
cattttcatccgtcaaatcccaatcacttatttacatgctcggaggacggatctctgctc
cactgggagaccacttcagcgtcagacatgagcacgctcctgaagaggggctggaacagc
agggtcgtctctcacagtggcgcaccgctggcaggggagaatgattctgcggtcagcgcc
tggcttgctggggactccagcaaaaatagactggaggcgactcatatgctaccgagccag
acgctgtctgtgaacagcctcgacgtgctcgagcagtgtttagtgtgcgggaccgatgga
gaggccgtgtacgtccacagacaagttcctgtttga

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