Puntigrus tetrazona (Sumatra barb): 122324361
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Entry
122324361 CDS
T08985
Symbol
rev3l
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase zeta catalytic subunit
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
122324361 (rev3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptet03400
]
122324361 (rev3l)
Enzymes [BR:
ptet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
122324361 (rev3l)
DNA repair and recombination proteins [BR:
ptet03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
122324361 (rev3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4683
DNA_pol_B
POL3_N
REV3_N
DNA_pol_B_exo1
zf-C4pol
Motif
Other DBs
NCBI-GeneID:
122324361
NCBI-ProteinID:
XP_043074662
LinkDB
All DBs
Position
20:complement(2787139..2848625)
Genome browser
AA seq
3010 aa
AA seq
DB search
MFSVRIVTADYYMSSPIKELDVCYSEFRESDVKKVPVVRIWGATPAGQKTCLHLHGMFPY
IYVPYDGFGKDADRYLRQVAYSIDRALNVSMGNPSSNVQHIFKVVLVSGMPFYGYHMKEK
TFMKIYLYNPQMVKRVSELLQGGAVMNKSFQPHEAHIPFLLQLFIDYNLYGMNMISLAAV
KFRINHATVGEHLSNRGGSSFSPKTQSKLSEGRLRDAVRWEYDNIPSSLILEEVERMSVC
ELEVDAVAADVLNRLEIENQIGRNPGLQAIWDDEKQRRQERGQSSHIDMPESQDRGFLEF
AESEKIFMKRFKEILKENEFDMTQTGSEVDSFPELSLYAAVLSPDDLPCIPASQVDVHRD
AFKGETQKRHGGKDAEVAVVDEEAILSLLENSQTFLHSHGPNQSAVLDSSQDQAMIDLFE
ALADDGFRVDRSRTVSQQLSGIASCMCNSDDEEAGPELEKEESELSIIMSQRWDCDMPGP
SAGQRLCMKESNESSSEEQQASSDEEIYWKGNSAVLIDLSIPQLDGAADENSDSSLTDKE
SRTRSSLKATDKILGSRNVFGNEAVRMEPPSSAKIIIEYKCAEQKLSQEDLTEIHLKSEE
VNEYSTGLRVNKEEPYIPPVKHPIPFKAANIPKLGAEKIGVHSLYTDDNQATCLNQPDPD
DSIFGNSKLAQSIKNCTSIKNVENKHLSISENNKSFFVCYSELMNCPTKTEMQLSTNEFR
RPVISFDQTQSPVANSQALGHQECETGLDKKEEDVNKLKIRYEDYQENKTERTIVAQQEA
HYKFFPSVILSNCLSRPIKKQTTSKTGDGCSIVDPPEQRRSRLKLKKKQXVGSKRVSPVR
TTSPMKEEANTFLSNPLGSLDQKKMIREVDMEISDPPTTEGFIKNSVEDELADIPTKIFC
TKVSSLPGSKYTLRAKRKMSYDSENGDQPSAGSVKQALVQHVSLKGKGHVFSQKRXETDX
KEPPIIIKYIIINRFKGQKNMLVKISKINADETCTVLTPEKLAQYKKLAPLKEFWPKVPE
STAVKYPLLEPKVKKCPKRKAKVNQVSKRAGTSPKSRCPQAGQARRAKQSKALITLPKLP
PPWPCYNEFTDDCCTEYSDVMVELGYLSERASSPTDSTPPRCWSPTEPILGSNSNLINPY
NDPCLGSSYEVLAPKPYQRGLLNRRTTRSKKTSATSPKRQTNTTTKSVNKDSVTSVVSQR
KGNRAASRRPKKHCESTEGITLEDDTSTSQKYRMLNDKQVSRKSRQDEESDSRLLQTPYS
VNNALITSSSDDLTPYQHPISLKNSQEDFTISCSRSQTEVTSTGKKIKSRCCFCLXYHCL
KXLXKDSQIVLNPCIEKSLNHILSPSTRMVGYPCSVITYSSSNSXSQNMSQDGTITKNLC
KFKSEVSGHEENSRTIQHLQSARKKKPAKKDTITFLESDDCRPSLMPSAKSAIRSGFHTV
LTLSDPKIDEMCVSPELPSGLVVLKELLQKRQHEAGQEPCESDHVTEDMSSTNQPTDILK
TAKSKLTYSSVSRKPRTKVPKELQFKIRSNQMTQDDLRIDCLSSDGSPVFFSDPGFDSCS
IEDSLSPELPDNYSFDINAIGQTEFSSLYSGNQFVLTDRNLPQKFLSDVSQEAINAFVGL
GDRTHKVFDVDASSKHEQDRHKSGALSPELFDKSFCESGKVYPNKMSLDSEKIFSKDWEG
SLGKIHGLSHFQDFHCEKKDVLLDPEPFSPLTSASFGYNGVSPNSDPLDGSSATPSSSPQ
SFSSLSQLKNGGQSSKTGGTHILKPLMSPPTREEILATLMELDLSEAIYQEPFCSDPSDA
PLKPRYIGGRKLILETRLVKELDEFQGDLSQSGLQFWKMAFSAMTNQASAPNNGCKSSVL
TKEQNPFSGSDQKVIMLPCKCAPSREQVQFWLQAKKQYECLQSERKNLCGQTTVELATYD
GTSHQNEDSNLPSSGNHDKRLQSWEKNVEKTSDLGFRLGIDRSGLSLPLHISPVKAASSN
SRPKSVKCIFDIETNKSCQITSPSSPDLSTLQQRPAEIKQDEDREDLTDVLQSPGLDQSQ
NLNDTSLEDVQQDLLSPSXFSVKHLYSDVKCSYLLHSTPVQRRSYTDDDESSYSPVRNED
IEPRSQRPQQKGHKSKDALRRVLLTTQMKNQLTTMNIPKRENSQIEGPSICNSYGFKVSM
QNLQEAKALHEVQHLTLISMELHARTRRDLEPDPEFDPICALFYCLSSDIPLPKCDTTQM
TGAIVIDKDCRFSAQASRSTAPLLFKSGVTGLLVTYVRDEKELFEEITNILREYDPDILV
GYEVQMHSWGYLLQRASTLGVDLCQQLSRVPGDTKENRFMAEKDEYGADTMTEIHIVGRV
VLNMWRIMKTEAALNNYTFENVAFHLLHQRFPLYSHRTLSDWFDHNTHLHRWKVVDHYVS
RVCGTVQLLQQQDIIGRTSELARVFGIQFYHVLTRGSQYRVESMMLRIAKPMNYIPVTPS
TQQRAQQRAPQCIPLVMEPESRFYSNSVIVLDFQSLYPSIIIAYNYCFSTCLGRVENLGT
CDEFRFGCTSLRVPPDLLYHLRNDITISPNGVAFVKSSVRKGVLPSMLEEILKTRIMVKQ
SMKVYKNDKALLRLLDARQLGLKLIANVTFGYTSANFSGRMPSVELGDSIVHKARETLER
AIKMVNDTEKWGARVVYGDTDSMFVLLKGATKEQAFKIGNEIAEAVTATNPKPIKLKFEK
VYLPCVLQTKKRYVGYMYESLDQKNPVFDAKGIETVRRDGCPAVAKILERSLKLLFESRD
ISQVKQYVQRQCVKVLEAKASMQDLIFAKEYRGSGSYRPGACVPALELTRRMMAYDRRLE
PRVGERVPYVIVYGMPGVSLIQLVRRPVEVLQDPSLRLNATYYITKQILPPLARIFSLIG
VDVFHWYQELPRVQKAWSSANGGGEESTRKGTISQYFTTLHCPVCDELTQLGVCEGCRAE
PQRVAVHLHQDLRLWESQQEQLLKVCRSCSGSAERQVPCSSLDCPILYKLSRVNRNLSRG
PYLRQLLQQF
NT seq
9033 nt
NT seq
+upstream
nt +downstream
nt
atgttttcagtgcgcatcgtcacggcggattattatatgagcagtccgatcaaagagctg
gacgtctgttactctgagttcagagaaagcgatgtcaagaaagtgcccgtggtgcggatt
tggggggccacaccagcaggccagaagacatgtcttcatctgcatggtatgtttccatac
atctatgtgccgtatgatgggtttggaaaggatgcagatcgttacctgcggcaggtggcc
tacagtattgacagagccctgaatgtcagcatgggaaacccctcgtctaatgtgcagcac
atctttaaagtggttctggtgtctggcatgcctttctatggataccatatgaaggaaaaa
acctttatgaagatttacctatacaacccacagatggtcaaaagggtgagtgaactcctg
cagggtggagctgtaatgaataagagttttcagccccatgaagctcacattccattcctg
ctgcagctctttatcgattacaacctctacggcatgaacatgatcagtcttgctgctgtt
aagtttcgaataaaccatgcaacagtaggagagcatttgtcaaatagggggggtagtagc
ttcagcccaaaaactcagtctaaactcagtgaaggcagactgagagacgcagtgcgctgg
gagtatgacaacataccgagttctcttattttagaggaggtggaacggatgagtgtgtgt
gagctggaggttgatgccgtggctgctgatgttctcaaccgcctagagattgagaatcag
attgggagaaaccctggtcttcaggccatctgggatgatgagaaacagcgacgacaggag
agaggtcaaagttctcatatagacatgcctgaatcacaagatcgaggctttctagaattt
gcagagagtgaaaaaatcttcatgaagagattcaaagaaattctcaaggaaaatgaattt
gacatgactcaaactgggtctgaagttgactctttccctgagctctcactttatgctgct
gtgttaagcccagatgacttgccttgcatacctgccagccaagtggatgtgcatcgagat
gcatttaaaggtgagacgcaaaaaagacatggtgggaaagatgctgaagtggcagttgtt
gatgaagaggccattttgagtttgttggaaaacagccagaccttcctccattctcatgga
cccaaccaatcagcagtacttgacagcagtcaagaccaggctatgattgatctgtttgaa
gcattggctgatgatggatttagagtcgacagatccagaacagtgtcccagcagctgtca
ggcattgctagctgcatgtgtaacagtgatgatgaggaagctgggcctgagctggagaaa
gaagagtcagaactcagtataatcatgtcccaaagatgggactgtgacatgccaggaccc
tctgctgggcaaagattatgtatgaaagaatcaaatgaaagctccagtgaagagcagcag
gcttcatcagatgaagagatatattggaagggaaacagtgctgttcttattgatctgtcc
attccacagttggatggagctgcagatgagaatagtgattcatcactaacagacaaggaa
tctcggacacgctcatctctaaaagcaacagacaagatccttggaagcagaaatgttttt
ggaaatgaagctgttcgtatggagccaccatcttctgctaaaattattattgaatacaaa
tgtgctgagcagaaactcagtcaagaggatttaacagaaatacatttaaaaagtgaagag
gtgaatgaatattcaactggattaagggttaacaaagaggaaccatatattccaccagtt
aaacacccaattccttttaaggctgcaaatatacctaaacttggtgctgaaaaaataggt
gtgcactctttgtacactgatgacaaccaagccacttgccttaatcagccagatcctgat
gattcaatttttggaaactctaagcttgctcagagcataaaaaattgcaccagtattaaa
aatgtggaaaacaagcatttatccatctctgagaataacaagagtttctttgtatgttac
tctgagctgatgaactgccccaccaagactgaaatgcagcttagtacgaatgagttcaga
agacctgtgataagctttgaccagacacaaagccctgtggcaaacagccaagctttgggc
catcaagaatgtgagacaggactggataaaaaagaggaagatgtcaacaaattaaaaata
agatatgaggattaccaagagaataaaactgagaggaccattgtggcacaacaggaggca
cattacaaattttttcccagcgttattctgtcaaattgcttgtccagacctatcaagaaa
cagactacgagcaagactggagatggttgctctatcgtagaccctcctgaacagcgaagg
tcaaggttaaagttgaaaaaaaaacaanntgttgggtccaaaagggtaagccctgtgagg
acaacatctcctatgaaagaggaagcaaacacatttctttccaatcctttaggctctctt
gaccagaaaaaaatgataagggaggttgacatggaaatatcagatccaccaaccactgaa
ggtttcattaagaactctgtagaggatgaacttgcagatattcctaccaaaatcttttgt
accaaggtgtctagtttaccaggtagtaaatataccttgcgggcaaaaaggaaaatgagt
tatgacagtgaaaatggagatcagccaagtgctggttctgtcaaacaagctttggtgcag
catgtaagccttaagggaaaaggtcatgtctttagccaaaaaagannggaaactgactaa
aaagagccaccaatcatcattaaatatataatcattaacagattcaaaggtcagaagaac
atgttagtgaagatttctaaaattaacgctgatgaaacttgcacagttttaacaccagaa
aagcttgcgcaatacaaaaagcttgctcctctcaaagaattctggcccaaagtgccagag
tctacagcagtgaagtacccattacttgaaccaaaagtaaagaagtgtcccaaacgaaag
gctaaggtgaaccaagtgtcaaagagggctggcacctctccaaaatctaggtgtccacaa
gctggtcaggctaggagggcgaagcagtcaaaagcactgataacattaccaaaattaccc
cctccatggccttgttataatgagttcactgatgactgttgtacagagtattctgatgtg
atggtggagttgggttatttgtcagaaagagcctccagtcctactgattcaaccccacct
agatgttggtctcctactgagcccatactgggatcaaattcaaatctaataaacccatat
aatgatccatgtctaggttcatcctatgaagtactagctccaaaaccataccaaagaggt
cttttgaatagaagaacaaccaggtctaaaaagacttctgctaccagcccaaaaagacaa
actaatactacaacaaagtcagtgaacaaagattcagtgacatctgtggtttcacagagg
aaaggtaatcgagcggcttcaaggagacctaagaaacattgtgaaagtactgaaggaatt
actctggaagatgacacatctacctctcagaaatacaggatgcttaatgacaagcaagtc
tcaagaaaaagcaggcaagatgaggaaagtgactccagactcctacagactccatattca
gttaacaatgcacttattacttcctcatctgatgacttaactccttatcaacatcccatt
tctctaaaaaacagtcaagaggactttactataagttgttcacgctctcaaacagaggtc
accagtactggaaaaaaaatcaaatcaagatgttgtttttgtctttaataccattgcctc
aagtgactctaaaaagactctcagattgtcctcaatccctgtattgaaaaatctctaaat
cacattctttccccatccaccaggatggtaggatatccatgttctgtcatcacatacagc
agttctaattcgnaatcacaaaatatgagtcaagatgggactatcacaaaaaatctatgt
aaattcaaatcagaggtttctggccatgaagagaattctagaactatacagcatttgcag
tcagccaggaaaaagaaaccggcaaaaaaagataccattacgtttttggagtctgatgat
tgtagaccctcccttatgccctctgctaagagtgcaattagatctggatttcacacagtt
cttacgttgtcggaccctaaaattgatgaaatgtgtgtttctcccgagttgccttctgga
ctggttgtcttgaaggaacttctccagaagaggcaacatgaagcaggacaggaaccatgt
gaaagcgatcatgtgactgaggatatgtcttctaccaatcaaccaacagatattttaaaa
acagccaaatctaaattgacttattcatcagtatcaagaaaaccaagaactaaagtgcca
aaagagttacagttcaaaatcagaagtaatcaaatgacacaggatgatttgagaattgac
tgtctttcatcagatggcagtcctgtgtttttttctgaccctggctttgacagttgctct
attgaagatagcttatctccagagctcccagacaattacagttttgatatcaatgccatt
gggcaaacagagttctccagtctttattctggtaaccagtttgtgttaactgataggaac
ttgcctcagaagtttctcagtgatgtcagtcaggaggcaatcaatgcctttgtcgggtta
ggcgacaggacacacaaggtgtttgatgttgatgcgagcagcaagcatgaacaggacagg
cacaagtctggggcccttagcccagaactgtttgataagtcattttgtgaaagtggcaaa
gtttatcccaataagatgtctcttgattcagaaaagatatttagcaaagattgggaaggc
tctttaggtaaaatccatggcctcagccactttcaggactttcactgtgaaaagaaagat
gtgttgcttgacccagagcccttttccccccttacttctgcttcgtttggttataatggt
gtttctccaaatagtgatcccctagatgggagttcagcaacaccaagcagttctccacag
tccttcagctcactgtcccagctgaaaaatggaggtcagagttcaaagactgggggtact
cacattctcaaacctctcatgtctccacctactcgggaggaaatcttagctactctgatg
gaactggacctctcagaagctatttaccaggaaccattctgtagtgacccatcagatgca
cccttgaagccaaggtatattggtggtcggaagttgattttggaaaccaggctggtgaaa
gaactggatgaatttcaaggagacttatctcaaagtggcttacaattttggaaaatggca
ttttctgcaatgacaaatcaagcctctgcaccaaacaatgggtgtaaatcctctgtactg
accaaggaacaaaacccattttctggcagtgatcagaaagtgattatgcttccctgcaag
tgtgcgccgagtcgagaacaggtgcagttctggttgcaagccaaaaaacagtatgagtgc
cttcagagtgaaaggaaaaatttgtgtggccagacaactgtggaacttgctacatatgat
gggacctcacatcagaatgaggactctaatttaccttcctcagggaatcatgataaaagg
cttcagagttgggagaaaaatgttgaaaagacttcagatttaggatttaggttaggaatc
gataggagtggtttaagtttaccactccatatttcaccagttaaagcagcttcatctaac
agtagacctaagagtgtgaaatgtatcttcgatatagagacaaacaaaagttgtcaaatc
acttctccaagttctcctgatctttctacattgcaacaaaggcctgctgagattaaacaa
gatgaggacagggaggatttgactgatgtattacaatcccccggcttggaccagtctcaa
aatctcaatgacacatcacttgaagatgtacagcaagacctcttgagtccatcangtttt
tcagtaaaacacctatattctgatgtcaaatgctcttacctacttcatagcacacctgtc
caacgaagaagctacactgatgatgatgagtctagctacagtccagtaagaaatgaagac
atagagcccagatcacagcgaccacaacaaaagggtcataaaagcaaagatgctttacgg
agagttttgcttaccacacaaatgaagaatcagcttaccactatgaatattccaaagaga
gaaaactcccagattgagggaccatcaatctgtaattcctacggatttaaagtcagtatg
cagaacttgcaggaggccaaagcattgcatgaggtacagcacctcacattaataagcatg
gagcttcatgcaaggactcgccgtgaccttgagcctgaccctgaatttgaccctatttgt
gctttgttctactgcctcagttctgatatccctctcccaaagtgtgacactacacagatg
acaggtgccattgtcattgataaagattgccgtttttcagctcaagcctccagaagcact
gcgccattgctttttaaatctggtgtgacgggactgctggtgacctatgtccgtgatgag
aaggaactttttgaagagatcacaaacattcttagagagtatgacccagacattcttgtt
ggatatgaggtccaaatgcattcttgggggtacttactacaacgcgcatcaacactcggt
gtagacctgtgccagcaactctcccgtgtgccaggagatacaaaagaaaataggttcatg
gcagagaaagacgagtatggtgcagacactatgactgaaattcacattgttggacgtgtt
gtcctcaacatgtggaggattatgaagactgaggctgcattgaataactacacttttgag
aatgtggctttccacctcctgcatcagcgctttcctctctatagccatcgcacactctcc
gactggtttgaccacaacacacacctgcataggtggaaagtggtggatcattatgtgagc
cgtgtgtgtggcacagtccagttgcttcagcagcaggatattatcggcaggacaagtgag
ctggcacgtgtgtttggaatccagttctaccacgtgctaaccagggggtcacagtaccgt
gtggagtcaatgatgttaaggattgcaaaaccaatgaattacatcccagtgactccaagc
acacagcagcgtgcccagcaaagagctccacagtgcattccgctcgtcatggagccagag
tcacgtttctatagcaactctgttattgtgttggatttccagtcactttatccatccatc
atcattgcctacaattactgtttctccacctgccttggacgtgttgagaatcttggaacg
tgtgatgagttcaggtttggttgtacatcccttagagtccctcctgacctcctttaccac
ctcagaaatgacatcactatttctcccaatggtgtcgcatttgttaagtcttcagtacgg
aagggtgtcctgccaagtatgcttgaggagatcttgaagacgaggatcatggtgaaacag
tccatgaaggtgtacaaaaatgacaaagctctattacgcctgctggatgccaggcagctt
ggccttaaacttattgctaatgtcacgtttggttacacttctgccaacttctcagggcgt
atgcccagcgttgagttaggtgacagcattgtgcacaaggcccgagagactttggagaga
gccataaagatggtcaatgacacagagaagtggggagcacgtgttgtctatggcgataca
gacagtatgtttgtgctgttgaaaggagcaaccaaggaacaggcatttaagattggtaat
gaaattgcagaggcggtcactgctaccaaccctaaacctatcaaactgaagtttgagaag
gtctacctcccatgtgtgttacagacaaagaagcgttatgttggatacatgtatgaaagc
ttggatcagaaaaacccagtctttgacgccaaaggcattgaaactgtacgtcgtgatggt
tgccctgctgttgccaagattttggagcgatcactgaagctgctttttgagtcacgtgac
atcagccaggtgaagcagtatgtgcagcggcagtgtgtgaaggtgttagaggccaaagcc
agcatgcaggacctcatttttgccaaagagtaccgtggcagtggatcgtaccgaccaggg
gcctgtgtccctgctctggaactcaccaggcgtatgatggcatatgatcgacgtttagag
ccacgcgtgggtgagcgtgtaccgtatgttattgtgtacgggatgccaggagtatctctc
atacagctggttagacgtcctgtggaagtactgcaggaccccagtctgcgcctcaatgca
acctactacatcaccaagcagatcttgccaccgcttgcacgaattttcagcctaattgga
gtagatgtgttccactggtaccaggagttgccgagggtacagaaggcatggagctctgcg
aatggaggaggggaggagagcacaagaaaaggtaccatctctcagtactttacaacgctg
cattgcccggtttgtgatgagctgacacagctcggagtatgtgaaggttgtcgggctgaa
ccacaacgtgttgctgtccacctacaccaagacttgcggctttgggaaagccagcaagaa
cagctcctaaaggtatgtagaagttgcagtgggagtgcagagcgccaggtgccatgcagc
tcgctggactgtcctatcctctacaaattatctcgtgttaataggaatctttcccgagga
ccatatcttcgccagctgctgcaacagttctga
DBGET
integrated database retrieval system
