Puntigrus tetrazona (Sumatra barb): 122324363
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Entry
122324363 CDS
T08985
Symbol
lamc2
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit gamma-2
KO
K06246
laminin, gamma 2
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04382
Cornified envelope formation
ptet04510
Focal adhesion
ptet04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122324363 (lamc2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122324363 (lamc2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122324363 (lamc2)
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Gene cluster
GFIT
Motif
Pfam:
Laminin_B
EGF_laminin
EGF_LMN_ATRN
JAG1-like_EGF2
WXG100
Motif
Other DBs
NCBI-GeneID:
122324363
NCBI-ProteinID:
XP_043074665
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All DBs
Position
2:16677139..16689372
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AA seq
1180 aa
AA seq
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MRVQGSAVRLSELRTNGPAVSLISSRRYKTETXAENLTSWMWKMKISWIFLCAVCLWSPV
HGTVQSSNACSCHGKAQYCKGDHLGLYCINCQGNTEGRHCESCKEGYYHQRAGDNCIPCN
CNTAGSEGPGCNNEGRCSCKQGVHGDKCDRCRDDTPVTAGGCEPLRLICRSRSSGRLTSN
KEECLPCFCNGHSDVCASAEGYSILNITSTFENGPEGWRAATAQGVNPSQVQFRWSPTHK
DLEVISKEILPVYLFAPASFLGNQALSYGQMLSFSLRLDRGVRRPSISDVILEGAGLKVS
ASLGDLRTVVPCGKKVTYTFRLDEQPGSKWKPQLSSKQFQTLLSNLTVIKIRGTFGENGR
GYLDDVSLVSAKLGPGTPATWVERCRCPAGYDGLFCERCALGYRRRFPGQGPQSPCDPCS
CQGGTCDPETGGCYSADEIPNLQMCPKGYYVNRQQSNSCQKCPCPEGEACYVIPGTQEVM
CARCPRGTTGSRCEICDDGFYGDPLGEYGRPKQCQPCQCYGHVDQNAVGNCDSRTGECRK
CLNHSTGPKCENCEDGYYHIYPTEPCQACNCNRQGSLSNSCNDKGQCNCKEGYDGLRCDR
STCPSCFNPVKNKIEVYARQLQEMEDLFNGFKGDGAPVSDAQMERTVRATEVMVQNLEFR
ANELTNAEKQLQEKLASISRSQLREDRKMEALLTTVDGIRNKDEQYRTEVSEIRKLISEI
RLKLQQAKRDIQQAEFPSGDAVPGADTLSDLVQRAADLAEQHQGEAVTVETTAANSLAES
EKALDFIRGVIGRENNVKDELRDLKKQYEADVTKVLDMDRKAIQITDAAGKESGVAQNAI
KLLSDLEKKLPKPLTDIIGVVSKFDGLKGMVDGNLSQYQDFQQYILKEQIETDDFFNKAK
SLQQVQDKLLARANAAEAVKNKSLEIFANNKDSLDKTLETLKGFDDQISRNQDLADAAIK
KLPAINATIQKAEADNVKTQDILDAMSAHYRDAQDTIDSLTNNATKLERMSATLPPSWDI
LEAATKLKKDVDGLKTGASATRDKLNEEKNKAKAQITEAKNAVIESTGALQNAKNAKDAV
TDTLNTITDIMSTLVPGTSGKIDDTRLVELENAITKSRSRVEKELKPRLRDLEEKEAQQR
ATIAGMINDIDTILADIANLEDIRKSIPNGCYNIPPIERP
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgcagggatcagctgtccgtctcagtgagctgaggactaacggacccgcggta
tccttaatatcctccagacggtataaaacagagacgnaggcggaaaatcttacttcttgg
atgtggaaaatgaagatcagttggatctttctttgtgccgtttgcctctggtctccagtt
cacggaacagtccaatcctccaatgcctgttcatgtcatggtaaggcacagtactgcaaa
ggagatcacctgggactctactgtataaactgccagggaaacactgaagggcggcactgt
gaaagctgtaaggaagggtactaccaccagagggcaggagacaactgtattccctgcaac
tgcaacactgcaggttctgaaggaccggggtgcaacaatgagggacggtgtagctgtaaa
caaggagttcatggagacaagtgtgaccgctgtcgtgatgacactccagtcactgccggt
ggatgtgagcctttgaggctaatctgtcggtcgcgcagcagcggtcgcctcacatctaat
aaagaggagtgcctgccctgcttttgcaatggccattcggatgtgtgcgcctcagctgag
ggatattccattctcaacatcacttcaacttttgaaaatggacctgaaggttggcgagcc
gccaccgctcaaggtgtgaacccttcacaggtgcaattcaggtggtctcctacgcacaaa
gaccttgaggttatctctaaggagatccttcctgtttatctgtttgctccagcatccttt
ctggggaatcaggcgttgagctacggtcagatgctcagcttctctctgcgtctggataga
ggtgtccgtcgtccttccatctctgatgttatcctagaaggagcaggtcttaaggtgtct
gcttcattaggagacttgaggactgtggttccctgtggcaagaaagtcacgtacactttc
agactggacgaacagcctggcagcaaatggaaaccacaactctcatccaaacaatttcaa
acacttctgagcaaccttacagtcattaaaatcaggggaacctttggtgaaaatggacgt
ggatatctggatgatgtgtctctggtgtcagctaaactgggtcccggcacccctgccacc
tgggtggaaaggtgcagatgtcctgctggttatgatggattattttgtgaacgctgtgcc
cttggatacaggagacgtttcccaggccaaggtccccaaagcccctgtgatccctgctcc
tgtcagggtggaacatgtgatccagaaacaggaggctgttactcagctgatgagatacca
aatctgcagatgtgccctaaaggttattatgtaaaccgccagcagtccaactcctgccag
aagtgtccctgtcccgagggagaggcttgctatgttattccaggaacccaggaggtgatg
tgtgctcgctgtccccgggggactacaggctctcgttgtgaaatctgtgatgatggtttt
tatggagatcctctgggagagtatggccgtcccaaacagtgccagccttgccaatgttat
ggccatgtggaccagaacgctgttggtaactgcgacagccgaacaggggagtgtaggaaa
tgcttgaatcacagcaccggccccaagtgtgagaactgtgaagatggatactaccacatt
taccccacagagccatgtcaggcttgtaactgcaaccgacagggttctttgtcaaattca
tgcaatgataaaggacagtgcaactgtaaggaaggttacgatggactcaggtgtgacaga
tcaacatgtccttcctgctttaacccagttaagaacaagatagaggtttatgcaagacag
ctgcaagaaatggaggatttatttaatgggtttaaaggcgacggcgctccagtcagcgat
gctcagatggaaaggactgttagggccacagaggtcatggtgcaaaacctggagtttaga
gcaaacgaactcacaaatgcagagaaacagcttcaagaaaaactggcgagcattagccga
tcccagctgagagaagacagaaaaatggaggctttgttgacaacagtggatgggatcaga
aacaaggatgagcaatacagaacagaagtttcagagatccgtaaactcatcagtgagatc
aggttaaaactgcaacaggccaagcgggacatccagcaggctgagtttccctcaggtgat
gcggtaccaggcgctgacaccttgtctgatttggttcagagagctgctgatcttgctgag
cagcaccaaggtgaggcagtgacagtggagacaactgcagccaattccctagcagaatct
gagaaagccctagacttcatccgtggtgtcatcggccgagaaaataatgtcaaagatgag
ctcagggacctcaaaaaacagtacgaagcagatgtaactaaagtgcttgacatggatagg
aaggccattcaaattactgacgcagctggaaaggagagtggagtggctcagaacgctatc
aaactgttatctgacctggagaagaaacttccaaagcccctgacggacattattggtgtg
gtttccaagttcgacggtctgaagggtatggtcgatggcaatttatcacagtaccaggac
tttcagcaatatatccttaaggagcagatagagacagacgattttttcaataaggccaag
agtttgcagcaggttcaagacaaacttcttgccagggcaaatgcagctgaagcggttaaa
aataaatctctggaaatctttgccaataacaaggatagtctagacaagacactagaaacg
ctcaaaggatttgatgaccagatcagtaggaatcaggatctggcagatgccgctattaaa
aaacttcctgccatcaacgccaccatccagaaggccgaagctgacaacgttaagacccag
gacatcctggatgcaatgtctgctcattacagagatgctcaggatactatcgactctctt
acaaacaatgcaaccaaactggagagaatgtcagctactcttcctccctcttgggatatt
ttggaagctgccactaaattgaaaaaggatgtggacggactgaagacgggggcttctgcg
actagagacaaactgaacgaagagaaaaacaaggcaaaagcacagataactgaagcaaag
aacgctgtcattgaatccactggggcacttcaaaatgcaaagaacgccaaggacgctgtt
actgatactttaaatacgatcactgatattatgagcacacttgttccaggaacctctggg
aaaatcgacgacacacgactggtcgagctagagaacgccatcactaaaagccgcagccgc
gtggagaaggagctgaagcccagactcagggatctggaggagaaggaagcccagcagaga
gccaccattgcaggcatgatcaatgacatcgacaccatactggctgacattgccaactta
gaggacatccgtaaaagcattcccaatggctgttacaacataccgcccattgaaaggccg
taa
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