Puntigrus tetrazona (Sumatra barb): 122324434
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Entry
122324434 CDS
T08985
Symbol
taf4b
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122324434 (taf4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptet03021
]
122324434 (taf4b)
03036 Chromosome and associated proteins [BR:
ptet03036
]
122324434 (taf4b)
Transcription machinery [BR:
ptet03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122324434 (taf4b)
Coactivators
SAGA/TFTC/STAGA complex
122324434 (taf4b)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
122324434 (taf4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
122324434
NCBI-ProteinID:
XP_043074766
LinkDB
All DBs
Position
20:10419006..10432953
Genome browser
AA seq
848 aa
AA seq
DB search
MSETSGSDKLDNEPSRAPTENEENNNDDAQKNNMEPLESSQIALDNKKEVSDSSANANTS
ENSKPDLASNGEGEQPKPKTQTDSSSSASLRPVTVTSSGSASSEAPPKILAGPAQIRSTT
PVVVGARVLTSNVQGPGATSLALAPQPGRVCSVSSVAISQPRVTTLTTAKAAVVTLPRIS
APMTRTPQTVPLQLPANFQVPQGMVLIRSDSGQLMLVSQQALAQAQAQGMLPKPTSANAS
AIVRPPSSQPTVTTTPIIRVSFPPSSATATTNIKLNPTTGTGVQKPPTATGTAIFTPSCT
TGATIIKPAGVTGTAIRKPSSTMGPVIKASQMTPNSSTPGTFNQRTNSVTATTIINTSAV
KSVGKGALSTQGNAPRLVSPNVPARSSTNTSSTPVTVTAETLENVKKCKNFLVTLMKLAS
SGTRSANMAQNVKALVKGLLDGKLEAEEFTEKLYMELKSSPQPYLVPFLKRSLPAVRQLT
PNSQLFIQQCDQLKPSDSAPTKAANLKSTASVSSSLKPNQPTRTAQLVIQQPKGVIDKQS
LTSAPPGLPAQNQTQPKQMLIQTNAHSAGAVVRQSILQASKTHFSQSPLPAQAHGFKDST
SSSFRDDDDINDVASMAGVNLSEENARILASGSELVGSVIRSCQEEPFLFSSALQSRVLQ
IGESLSITEICPDVLELLSLATQERLRDLLEKISIVAQHRQISYKDDWHYSQTNDTRSQL
KFLEQLERLEKQRREEEEREALLRIARSRTNSEDPEQQRLKQRAKEMQQLELAQMEHRDA
NLAALAALGPRKRKPLEAAGSGASQLLGSCGQFATRAPIRVTLRDLTFCMEQDPTFRHTL
MLYRAFLG
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaacatcgggttcagataaattagacaatgaaccgtctcgcgcgccaacagaa
aacgaagaaaacaacaacgacgacgcgcaaaaaaacaacatggagcctttggaaagttca
caaatcgcattagacaataaaaaagaggtgtcagactcgagcgctaatgctaacacctct
gaaaatagcaaaccagatttagcttctaacggtgaaggagagcagccaaaaccaaagacg
cagactgattcatcaagctctgctagtctgcggcctgtaacagttacgagctccggttca
gcctcgtctgaagctcctccgaagatcctagcaggtcctgcacagatcagatccaccact
ccagtggttgtaggggccagggtgctgacgtctaatgttcagggaccaggggccaccagt
ttggcgctggctcctcagcctggaagggtctgctctgtaagctccgtggccataagccag
cccagggtcaccacgctgaccacggccaaagcagcagtcgtgacattgccaaggatttcc
gccccaatgacacgcacccctcaaactgtgccccttcagctgcctgccaacttccaggtc
ccacaaggaatggtgttaatccgcagtgacagcgggcagttgatgttggtatctcagcag
gctctggcccaggctcaggctcagggaatgctgccaaagccaaccagtgccaatgcctct
gctatagttagacccccatcctcacagccaactgtaaccactacaccaatcatcagagtt
tctttcccaccttccagtgctacagctactaccaatattaaacttaaccccactacaggg
acgggcgttcagaaaccacccaccgctacagggactgctattttcacaccatcatgtaca
acaggagctaccatcattaaaccagctggtgttacagggacagccatcagaaagcccagc
tctaccatggggcctgttatcaaagccagtcaaatgactccaaacagcagcacaccgggg
acctttaaccagaggactaattctgtcacggcaactaccataattaatacctctgctgta
aagtctgtgggcaaaggtgctctctccacccaaggtaatgccccacgtctggtgtctcct
aatgtaccagctagatccagcacaaacacttcttcaaccccagtcactgtaaccgccgag
accttggagaatgtgaagaagtgtaaaaactttctggtcactcttatgaagctagcgtcg
agtggcactcgttcagccaacatggctcaaaacgtcaaagctctcgtcaaaggcctgctg
gatgggaaactagaggcagaggagtttactgaaaaactctacatggagctcaaatcatcc
ccccagccatatctagtgcctttcctgaagaggagtctgccagctgtccgtcagctgacg
ccaaactcgcagctcttcattcagcaatgcgaccaactcaagccctcagattcagcacca
accaaggccgcaaacctgaagtccactgcgtctgtcagctcctccctcaagcccaatcag
ccaaccagaacggctcagctggtgatccagcaacctaaaggagtaatcgacaaacagtct
ttgacgtcagctccgccaggcttacctgcacaaaaccaaactcaacccaaacagatgctc
attcaaactaatgctcactcagcaggtgctgttgtgcggcagtccatccttcaggcatct
aaaacacacttttcccagtcgccccttccagcacaggcacacggcttcaaggacagcacc
tcgagctctttccgagatgacgatgacattaatgatgtggcctccatggccggcgtgaac
ctgagtgaggagaatgctcgtattttggcctctggctccgagcttgtgggatcagtgatt
cgttcatgtcaagaggagccctttttattctcatcagcccttcagtcacgagtgctgcag
atcggtgaatctttgagtataacagagatctgtcctgatgttcttgaactgctttctctg
gcgacacaagagaggcttcgggacctgctagagaagatatccatcgtggctcaacatcga
cagatttcttataaggatgattggcactacagtcagaccaatgacacgcgctctcaactg
aaattcctggagcaactggaaagactggagaaacagaggagggaggaagaggagcgagaa
gcacttctccgcattgcccggagtcgcacaaacagcgaagacccagagcaacagcgtctg
aaacagcgagccaaagagatgcagcagttggagttggcacagatggagcacagagatgca
aatttggcagcgctggcagccctggggccacgtaagaggaaacctctggaggcagccggc
tcaggggccagccagttgttaggttcatgtgggcagtttgctactcgagcaccgattcga
gtcactttgagagatctgaccttctgcatggagcaagaccccacattcagacacactctc
atgctgtatagagcatttctaggctag
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