Puntigrus tetrazona (Sumatra barb): 122324505
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Entry
122324505 CDS
T08985
Symbol
tprb
Name
(RefSeq) LOW QUALITY PROTEIN: translocated promoter region b, nuclear basket protein
KO
K09291
nucleoprotein TPR
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122324505 (tprb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122324505 (tprb)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122324505 (tprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
122324505
NCBI-ProteinID:
XP_043074929
LinkDB
All DBs
Position
20:complement(17644978..17662064)
Genome browser
AA seq
2352 aa
AA seq
DB search
MAAVLQQILERSEISKLPKTVLTKLEKYITEQQCEVDCLKAHQEQYRVDNEQQYFDIEKK
FAESQAQFVSQTQEHQILKEEYCKLEDELKCLREKNKEQVSSYTKLESHQNELSKAKDEL
ETEKRELVRTLERRSQEMEQQSEDLKRLNDRLVEVSSEKMQLHLKLDESEATEVSIKYKE
KRMEQEKDLLQNQVTWLNAELKGKSEELLSLSRQKGSEILELQCNLNNKEDEIARLKDQV
TSLKTSNENLQRQAEEMITKMREAKEQQASLEEKFSNELNANIKLSNLYKGAAADAEAKS
EELSRAVDELHKLLKEAGEAHKALEVKITELESCKDKEIVELKEKISSQEKELDNANELL
SDAKHRGTASILSEEQVTTMSPTAAAVAKIKPGMKLTEIYTAYVETQEQLQREKLENKRL
HKYLDDIVQEMEAKAPILKRQREEYERMQKSVSSLSAKLEQAVTEVHRLQKEADESNKHA
SVLERDNQRFEVQLADMSQQVRVLLIELEEARGNHVIRDEDEVCSADVSSTSEVISQHLV
TFRSVEELQQQNQRLLGALRDLSEEKEKDELEGDNMKRSEVEKYLEELQHELEQLKEKRA
QDLQKVDAVARQRDMFRMLLTQATGVTFPQGAGNEELMLTSTPRRSPAVTPTAGTPTGLV
ATAIESTESVEAKAALKQLQEVFVTYKKEKTEAEKALTEQSEKLQDQVTELRSENTKITT
QLEFTSKRYEMLQDNVEGYRKEIASLNEKSQKQAAAIQQSEQTIHTVTQDLRAAAEKLSI
TESEAENLRKERDMLKMVEIRLTQEKESFQAQQLGQNMLLTNLKSIQATLERSETETRQR
LTAQIEKQEREITQLQKRLENEVEQKHLLARNQDMQLMDVKKQLETQTSQYHRTREQLTA
AQLELNSLKLQISSRESRLVSPTLYTGLQGSEGDMEAVRAQLKQTESKVEELAERLKNTT
ASMEQYKAMSLSLEDSLDKEKQVTEQVRSSVQAQVETAQEQYKQLEQKLLEADKEKQSLL
EEKSKAVTAVEQELNELKKSLSGLQSEHQSALERADVAAAQEQQAILDSQEQAKMAAEAQ
DKYEREMLLHAADVEALQAAKAQALQAAHLRQQLEEKVQSTSAQLLEARVSWEEQEKILK
EEQSKLESRCEDLQRQNTLLHEQIQTLSGQMASQLQRATSESPLNVSLTEEGKSQEQLLE
ILRFVRREKEIAESRFEVVQGESLRHRLRVEHLERELKDVQEILNAEREKMQVTAKTLAQ
HDELMKKTETMNVLMETNKMLREEKKKLEQELQDTQAKLRKLESDILPMQESNAELSEKS
GMLQTEKKLLEEDIKRWKTRTQHLVSQQKDTDPEEYKRMHSEREAHLKRIQQLVEETSRL
KADASRNSCSLTTMQSQVLNLKENLGKVIGERDALKKDQEAKNLDIQEKNKTITQVKKIG
RRYKTQYEELKVEYDKLVAAAASAPAQDQEAQQASAQELQALKESLNQSENRTRELEGHL
ENLNRTVGEREAEARGAQEQASRLQAELTRLRQELQEKSSQEERLKQQLTEKEERTKKAI
LMAKQKISQLTGVKGQLQKENEELKQQKEELEVRVSALKSQYEGRLSRQERELRDLREQQ
ERHGEQRDEPPEQGSSKAQEPQRTTEQRQISLKSTPVAERGSTSTSEPPTANIKPTPLAA
TPSKPPAIPGNKSTPRASIKPMITPASVPTPTPTATVMPTTQVESQEPMQSSEGPLEHVT
VYGSASGSVRSTSPNVQTTLAQPLLNVQQQSQATAFIQPTQQQTQPPAEPSSQEPPAAVM
LQNSQLDRPLSTSTGIWSATASTSASASSVSASPSSALSKRPREEEQETMSADTQSQDEP
NDSPICKRVRIHRVGLEEEMLAEDSTEAESVVPGESQEAPDAGQDLESYATLEEMDEEPG
PSQSVPGDRLLPHLSETHRSPEEPDHHVIVIVSDTDSEGDHEEESEEEEEEEEQEYEEED
EEEEEEDDDEEEDGGIGEEGEESNEGSGSRDGNEAYEGDDTEGPDPTDPGTETEESLGAT
DSTQRMADSQSFETSTLDVFEAPVTSSAPRPHPQSPRRPQHSLPPRLNILAPPVQELGPP
AQVQRLPVRRPSLGRGLQLTSGMASSAQHFYEDDDRMVPSTPTLPPPRSDGFAEAIHSPQ
VAGVSRFRFGLSDDLPQTSSSHSDLGQLPSQGLGMYESSVFLEEESGGRSVPTTPLQISA
PVTILSETVASEAIEHASQSVPMVSTSTPGLSAPAGQSGVDDRDDMYMDAGDSAEASLEA
VSQTEADEPAQPSDEASLPSTSQEPSSSSADTSSSQPPKVRTGSGRQWTGGRGSRSFVKR
DGVTGVRGRFAR
NT seq
7059 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtgttgcagcagatattggagcggtcggagatatcaaaactccccaaaact
gtcttgactaagttagagaagtatattactgaacagcaatgtgaagttgattgtctgaag
gcacaccaggagcaatatcgtgtggataatgaacaacagtattttgacatcgagaagaag
tttgcagagagtcaggctcagtttgtgtcccagactcaagagcatcagatactgaaagaa
gagtactgcaaactggaggatgagttgaaatgcttacgagagaaaaataaggagcaagta
tcttcatacaccaaactagagtcacatcagaatgaactttccaaagccaaagatgagctt
gagaccgaaaaacgagagcttgtgcggacattggaaagaagatcccaggagatggaacag
caaagtgaggacctgaagcgtcttaatgatagattggtggaagtcagttcagagaagatg
cagcttcacctcaagctggatgagtcagaagccactgaggtctcaatcaagtataaagag
aaacgaatggagcaggagaaagatctactccagaatcaagtgacctggctaaatgctgag
cttaagggcaagagtgaagagcttctgtctctttcccggcagaaaggcagtgagattttg
gagctccagtgcaaccttaataacaaggaggatgaaatcgctcgcctcaaagatcaagtc
accagtctgaagacatccaatgagaaccttcagaggcaagcagaggagatgatcacaaag
atgagagaggcaaaagaacagcaagccagtttggaggagaagttcagtaatgagctcaat
gccaacatcaaactctcaaatttgtataagggagctgctgctgatgcagaagccaagagt
gaggagctcagtagagctgttgatgaacttcacaagctgcttaaagaggctggagaagca
cataaagctctggaagtgaaaatcacagagctggagagttgtaaggacaaagaaatcgtt
gaactgaaagagaaaataagcagccaggagaaagagctggataatgcaaatgagctgctg
tctgacgccaaacacagaggaactgcttcaattctttcagaggagcaggtgaccacaatg
tctcccacagcagctgcagttgccaaaatcaagccaggcatgaaacttacagagatatac
acagcttatgttgagacccaagaacagctgcaacgagagaaactagagaacaaacgactg
cacaagtacctggatgacattgtgcaggagatggaagcaaaggcacccatcctgaagagg
cagagagaggagtatgagcgcatgcagaagtctgtttccagtctctctgctaaattagag
caagctgtcacggaggtccaccgcttgcagaaagaagcagatgaaagcaacaaacatgca
tctgtgttggagagagataaccagaggtttgaagtgcagctagctgacatgtctcaacag
gtgcgggttcttcttattgagcttgaggaagctcgtggtaaccatgtgatacgtgacgag
gatgaggtgtgttctgcggatgtgagcagcacatcagaggtgatttctcaacacctggtc
accttccgcagcgttgaagagctgcagcagcagaaccagcgactccttggggcactcaga
gacctcagtgaggaaaaggaaaaggatgagttggagggagacaacatgaaacgcagtgag
gtggagaaatatctggaggagcttcagcatgagttggagcagctaaaggaaaagagagct
caggatctgcagaaggttgacgctgtggcacgacaaagggatatgttccggatgcttctt
acccaggccactggagtcaccttcccacagggtgctggtaatgaggagcttatgttgaca
tccaccccccgtcgttctccagccgtcacacctactgcaggcacccctacaggactggtt
gctactgccatagaatccacagagtcagtagaagccaaagctgcattaaagcagcttcag
gaagtctttgtgacctataaaaaagaaaaaactgaggctgaaaaagccctgactgagcaa
agcgagaaactgcaggatcaagtgactgaactccgctccgaaaacaccaagatcaccaca
cagttggagttcacttccaaacggtatgagatgctccaagataacgttgagggctaccgt
aaagagattgcctctctgaatgagaagagtcagaagcaggctgcagcaattcagcagagt
gaacagaccatacacaccgtcacccaggacctccgagcagctgctgagaaactctccatc
actgagtctgaagcagaaaacctacgtaaagagagagacatgttgaagatggtggagatc
agactgacccaggaaaaagagtctttccaggcccaacagcttggccaaaacatgctgctg
accaacctcaaatcaatacaggcaactctagagcgctctgagacagagaccagacagcgg
ctaacggctcagattgagaagcaggagcgagagatcactcagctccagaagagacttgag
aatgaggtggaacagaagcacctgctggcacgcaatcaagatatgcagctgatggatgtt
aagaagcagctggaaacacagacttcccagtaccacaggacaagagagcaacttactgct
gcccaacttgagcttaacagtctaaagctgcagatcagtagcagggagagccgtctagta
tcccccactctatatacaggcctgcagggcagtgaaggtgacatggaggctgtgcgtgcc
cagctgaagcagactgagagcaaggtagaagagctggccgaacgcctgaaaaacactact
gccagcatggaacagtacaaggccatgagtcttagcttagaggactccctggacaaagag
aaacaggtaactgaacaggtgcgatcatctgtgcaagcccaggtggagacagctcaggaa
cagtataaacagctggagcagaaacttctggaagcagacaaagaaaagcagagtttgttg
gaggagaaaagcaaagctgttactgctgtggagcaagagttgaatgagctgaagaaatct
ttaagcggcctgcagtctgagcaccaaagcgccttagagcgagctgatgttgctgcagca
caggagcagcaagccatcctggacagtcaggagcaggctaagatggcagctgaggcccag
gataagtatgagagggagatgttgttgcatgcagctgatgtggaagcactgcaggctgcc
aaagcacaggctctgcaggcagctcatctcagacagcagctggaagagaaagttcagagc
accagtgcacagctgctggaggctcgtgtctcttgggaggagcaagagaagattctcaag
gaggagcagtctaagttagagtctcgctgtgaggatctgcagaggcagaacactctcctt
cacgagcagatacagactctgagtggacaaatggccagtcagctgcagcgagccaccagc
gagagtccgctcaatgtctctctgacagaggagggcaagtctcaggagcagctcctggag
atcctaagatttgtgcgaagggagaaggagattgcagagtcccggtttgaggtggtccag
ggtgagagtctgaggcacaggttgagagtggaacatttggagagagagctgaaggatgtg
caggagattctgaatgcagagcgagagaagatgcaggtgactgcaaagactttggcccag
catgatgagctgatgaagaagaccgagaccatgaatgtgctaatggagaccaataagatg
ctaagggaggagaaaaagaaactggaacaggagctgcaggatactcaagccaagctgcgt
aaactggagtcagacatcttgcccatgcaggagtcaaatgcagagctaagtgagaagagt
ggtatgctacagacagagaagaagcttctggaagaagatatcaaacgatggaaaactcgc
actcagcacctagtgagccagcagaaggacactgacccagaagagtacaagcggatgcat
tctgagagagaagcacatctcaaacgcatccagcagcttgttgaggagactagtcgactc
aaagctgatgcttcaaggaacagttgctctttgactacgatgcagtctcaggttcttaac
ctaaaggagaacttggggaaagtgataggggagagggatgccctgaagaaagaccaggag
gccaaaaatctggacatacaggaaaaaaataaaaccatcacacaggttaaaaagattggt
cgacgttacaaaacccagtatgaagagctcaaggttgaatatgacaagttggtagccgca
gctgcatctgcaccggctcaggatcaggaggcacagcaggcatcagctcaagaacttcag
gccctcaaagagtccctcaaccaatcagagaacaggacaagagaactggaaggccatctg
gagaatctcaatagaactgtaggtgagcgagaagcagaagcacgcggtgcacaagaacag
gcctctcgtctacaagcagagctgacacgtctccggcaggagcttcaagagaaatcttct
caggaggagcgactcaaacagcagctgactgaaaaggaggagaggaccaagaaggcaata
ttaatggccaagcagaagatcagccagcttactggtgtaaaaggtcagctccagaaagaa
aatgaggagctgaagcaacaaaaagaagaattggaagtgcgagtgagtgcactaaagtct
cagtatgagggacgtctgagcagacaggaaagagagctgcgagacctccgtgagcagcag
gagagacatggagaacagagagatgagcctccagagcagggctccagcaaagcccaggaa
ccgcaaagaacgacagaacagcgacaaatctctctgaagtccacaccagttgcagaaaga
ggaagtacaagcacttcagagcctcctactgctaacataaaacccacgccactggcagca
acccccagcaagcctccagccattccaggaaacaaatctaccccgagggccagcattaaa
cccatgatcactcctgcctcagtgcccaccccaacacccactgccacagtcatgcccacc
acacaggtggagagccaagagcctatgcagtcatccgagggcccgcttgagcatgtgact
gtgtatggcagtgccagtggttcagtgcgatccacaagccctaatgttcagacaaccctg
gctcaacctctgctcaacgttcaacagcagagccaggccactgcattcatccagcccacc
cagcaacaaacccaacctcctgctgaaccatccagtcaggaacctccagctgctgtaatg
ctccaaaactcacagttagacaggcctctttctacatccacagggatctggagtgccaca
gctagcacaagcgccagcgccagttcagtgtccgcatctcctagtagtgccttgagcaaa
cgtccccgcgaagaggaacaagagaccatgtctgctgacacacagtcccaggatgagccc
aatgactctcctatttgcaagagggttcgcattcatagagtaggtctggaggaagaaatg
ttggctgaagacagcactgaggctgagagcgttgtaccaggtgagagccaagaggctcct
gatgctggacaggacttggagagctatgctactttggaggagatggatgaggaaccagga
ccatctcagtctgttcctggagaccgacttctgcctcatctctctgaaacccatcgaagc
ccggaggagcctgatcatcatgtcatagtcattgttagtgacacagatagtgagggagac
catgaagaggaatctgaggaagaggaggaggaggaggagcaggagtatgaggaggaggat
gaggaagaggaggaggaagatgatgatgaggaggaggatggtggaattggggaagaagga
gaagagagcaatgaagggagcggcagccgagatggcaatgaggcctacgagggggatgac
acagagggccctgatcccacagacccaggcactgaaacagaggaaagtcttggagcgact
gactccacccagcgcatggcagattctcagagctttgaaactagcacattggatgttttt
gaagcacctgtgaccagctctgcccctcgacctcacccccagtcaccccggagacctcag
cattctcttccacctcgtcttaacatcttggccccacctgttcaggaattgggaccccct
gctcaagtccagcggctcccggttcggcggccgtcactaggacgaggcctccagctcact
tcaggaatggccagtagtgcacagcatttctatgaggatgatgacaggatggttcctagt
acccctacacttcctcctcctcgctctgatggatttgctgaagcaatccattctccacag
gtcgcaggtgtgtcaagatttcgattcggcctttcagatgacctcccacagactagctcc
tctcactcagaccttggccagctgccatcacaaggtttaggaatgtacgagagttcagtt
ttccttgaggaggagtcgggaggccgcagtgtgcccacaaccccactacagatttctgct
cctgtgacaattttatcagaaactgtggcatctgaagcgattgagcatgcttctcagtct
gtgcccatggttagcacctccacacctggccttagtgctcctgcaggccagagcggagta
gatgacagagacgacatgtacatggacgctggagacagtgctgaggcttcacttgaggct
gtgtctcagaccgaggcagacgaaccagctcagccatcagatgaggctagtcttccttcc
acaagccaggaaccttcatctagttctgcagacacaagcagctctcagcctcctaaagtc
agaacgggatctgggagacagtggactggtggtcgtggttctaggagctttgtaaagaga
gatggcgtcacaggtgtgagagggcgttttgccaggtga
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integrated database retrieval system
