Puntigrus tetrazona (Sumatra barb): 122324748
Help
Entry
122324748 CDS
T08985
Symbol
lama2
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit alpha-2
KO
K05637
laminin, alpha 1/2
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04510
Focal adhesion
ptet04512
ECM-receptor interaction
ptet04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122324748 (lama2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122324748 (lama2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122324748 (lama2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
DUF948
SH3BP5
Motif
Other DBs
NCBI-GeneID:
122324748
NCBI-ProteinID:
XP_043075329
LinkDB
All DBs
Position
20:460300..604306
Genome browser
AA seq
3132 aa
AA seq
DB search
MNAACFAVLLGLLWRACGAQQRGLFPAVLNLASMADINTNATCGETGSEMYCKLVEHVPG
QPVKNPQCRTCNLRSDNANERHPIEYAIDGTNKWWQSPSIMNGMDYHYVTVTLDLQQVFQ
IAYVILKAANSPRPGNWILERSLDGETFMPWQYYAITDTECITRFNIVPRTGPPSYMHDD
EVICTSFYSKIHPLENGEIHTSLINGRPSADDPSPTLLSFTSARYIRLRFRRIRTLNADL
MTLALNDPRDIDPIVTRRYYYSIKDISVGGMCICYGHAKACPLNPYNKKFSCECEHNTCG
ESCDRCCPGYNQKPWMAGTFLTRHICEKCNCHNKSKECYYNQTVADAKLSLNIRGDYEGG
GVCLGCSENTEGVNCQSCVDGYYRPSEVSPHDPWPCRPCSCDLTGSLRSSCVPDESQATA
GLAVGSCICKQGYAGEKCDRCAFGYTGFPLCERCSCSSEGSVNQDPCKPPCVCKEHVEGQ
NCDRCKQGFYNLRGDRLRGCEKCYCSGLSSLCAESHWDYSNVTDMSGWYLTGVDGEGLVW
AVPSGETAHQLTVSQSDAQAHLTAPYYWSAPTAYLRKKLLAYGGRLEYWLSYDTESRDEP
VRIRSAPDVIIEGGGLRLIDSSSGVAVYPFSTAARGIDLLPESFQHHASGPTVSKRDFHS
VLNNIQRLLLRASYTQEHSAIYRLGRVSMSVAAEGSGSGFKAQSVEVCQCPPGYHGTSCE
MCAAGYRRVNGTLYRGVCELCRCHGHAERCDDVTGHCLGCRDDTVGPYCDQCAPGYYGDA
SGGSADDCQPCACPLLSPSNNFSPTCHVEASGEVICDRCPPGYTGTRCDRCANGYFGRPN
IPGGSCQPCTCNGNLDLTAELSCDPLTGACLRCHEGFGGPDCERCADGYFGDALIAKNCQ
ACRCHTNGSLSEQCHQETGQCQCRQHVVGRHCDECMSGSHMQGAQGCVPCHCNSFGSKSF
DCDESGQCRCQPGVTGQKCDRCAPGHFSFQEGGCTPCQCAHVGNNCDANTGQCICPPNTV
GERCDKCAPNHWGHDISSGCKPCGCNALGSVAQQCNVNTGCCMCREQFRGEKCDECKLGY
RDFPQCISCQCSAAGSSLDTCDAESGLCACADRSGQCSCKVNVEGVKCDRCKVGSFGLSH
RNPLGCSQCYCFGLSSSCTEATGLIRMRLTLMPEQTVLPLVDKSSRQEITAGVSFQHPDI
IANADVVQQHLSEPYYWRLPKQFKRSMITAYGGKLKYAIYYEARDETGRTSYEPQVIIKG
GPNKDKVMVRHMPALQIGQLTRHEIDITEHEWKHSDDRPMSREDFMDVLFHVEYILIKAS
HGSVMRHSRISEITLEVAEVGSPSQDSEIAHQIEKCDCPLGYAGLSCEECAAGFYRLSLH
AGGAASRAGFGTCVRCQCNGHSDSCDPETAVCQNCQHNTVGDKCERCAAGFYGVVRGFPN
DCKPCACPLLNPENNFSPTCQTEGFNDYRCSACPEGYEGKHCERCAAGFHGNPSVLGGRC
EECKCHAYGAFPGACDPLSGQCRCRAGASGLKCDQCMERHVCGPQGIVSCDDDCVGLLIR
DMDRLLRLIGSVNLTLPLPLPYKVLYRYENMTEELKHMLSPQRAPERLLQLADSNLGSLV
TEMDELLSRATKVSADGEQTAADAERSRKGAQDLELYVKNTLLAAEALRDKARELNATLG
SRDGAPEKSVNEMNNEIQAMLAELRKRQLSGKKNIADEELGAAEALLARVKRLFGDPHQA
TEDLKKEVSDKMGDYRRKLDEAQDLLRDAHDKTKQAEGLGISNQLNLERLQGKRDVAGEG
KKEMEEILAEGEKMLDEANALSDSVNRGKEELEEMARELGPLHDQLDFKVERLGRGLDDA
VPDLLLRAEDHASQLNDSAAILDSILAEAKNLSFNATAAFNAYTNIKNYIDEADKVAKEA
RKTSIDALQLASGPKGSLKDQAKGSVQKSHRLWNEAKELQNDVKENGDNLGDLQLRLKGA
NKKNKDLQKGLNDTMEKLNAIPDDLATKIQATKLKAAEANDTAIDVLNRLKDMNLNLMGL
KRNHSKLEDDVKKANNLIKDPEKNTIIHAAGAKVKDLENEADRLLEKLKPIQELQDNLKK
NISQIKELINQARKQANSIKVSVSSGGDCIRTYRPEIKKGRYNTIILHVKTVAADNLLFY
LGSAKYVDFLALEMRKGKVNFLWDVGSGVGRVEYPDLVINDGNWHRIEASRIGLNGSILV
HALEGPKTGILPSLRSARSPESYTVLDVDQNAYLFVGGMLGSVKKADAVKTTTFSGCMGE
TSLDGKPIGLWNYRERDGACAGCVVSPQPADTEGTVQFDGDGYAAVSRPTRWNPNVSTVM
FKFRTFSTDALMMYFATKDMKDFMSAELSDGRVKVSYDLGSGTGSIISDKRYNDGKWKSF
TMSRMKKEASVAIVNIDTNEDEQMRMASPGGATGLNLREDERMYFGGVPKAGNYRPEVVL
KRFSGCMKDIEVSRTPYNLLSSPDYTGLTKGCSIENLHTVSFPRPGYMELKPVSFDVGSE
ISLSFSTKSENGIILFGRGGLTSMTQLTQGLTPVHIPRRSRRQTGEPFLSVQLNKGALEV
LVFTGSRNPRRAFRKVEKGILHDGREHSLRIQRLQGASFTVQVDEEPPFQQPLPNDHPLS
IHRLFIGGIPTDIETGVQRPNVPFEGCIWNLLINTVPVDFSQPVAFENAEIGQCPDLAPX
PSPAPDPEEEEEEEGAAPPKPALRPTEAARPPPPASTATPLAEATPITDTPTGVKEAAVS
CTAEAEPVVLELAKQFGLSRNSHMAFEFDDKKVKNRLIIEFEIRTEAASGLVFYMARINH
ADFATIQLKEGMAHLSYDLGSGNTSVSVPRIINDGQWHKIRVTREKQRGFLVIDSRYSKH
TSSPKKADILDVVGMLYVGGLPLNYTTKRIGPVLYSIDGCIRNFKMMNLPLNMEQPTSSY
RVGSCFANPEKGTYFDGTGYAKAVDTYRVGNDVSVDLEFRTAQSSGVLLGVSSQKMDGLG
IELVNGKLFFHADNGVGRFTAVYEPNPEAGLCDGQWHTVSAHKLKHRLELVVDGEKSEAA
SPDVRSASADTNDPVYVGGYPEGLKQFGLTINTPFKGCMRNVKITKAGKTLEIQMNKVLE
LKGVQPLTCPAS
NT seq
9399 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcagcgtgtttcgccgtgctcctcgggctgctgtggcgggcttgtggagctcag
cagagaggtctcttcccagctgtgctgaacctggcctccatggcagatatcaacactaat
gctacgtgtggagaaacgggctcagaaatgtactgcaaactagtggagcatgtaccagga
cagcccgtgaaaaaccctcagtgtcggacctgcaacctgaggagcgataacgctaatgag
cggcatcccatcgagtacgccatcgacggcactaacaaatggtggcagagcccgagcatc
atgaacgggatggactatcattacgtcaccgtgaccctggacctgcagcaggtcttccag
atcgcttatgtgatcctgaaagccgcaaactcccctcggcccggaaactggattctagag
cgttctctggacggtgaaacattcatgccgtggcagtattacgcgatcacggacacggag
tgcatcacgcgcttcaacatcgtccccagaacaggcccgccgtcctacatgcacgatgat
gaagtcatctgcacttccttctactctaaaatccatcctctggagaacggtgagattcac
acgtcactaataaacggccgtcccagcgcggacgatccatcgccaacactgctcagcttc
acctcggcgcgctacatccgcctgcgcttcagaaggatccgcacccttaacgccgacctc
atgaccctcgccctcaacgacccccgagacatcgaccccatcgtcaccagacggtattac
tactccattaaggatatatcagtaggaggcatgtgcatctgttacggtcacgctaaggcc
tgccctctcaacccatacaataagaaattcagctgtgagtgtgaacacaacacttgtggc
gagagctgcgaccgctgttgccctggttacaaccagaaaccctggatggcgggaaccttc
ctcacacgccacatctgtgaaaagtgcaactgtcacaacaaatcgaaggaatgctattac
aaccagactgtggccgacgctaagctgagtttgaatattcgtggtgattacgagggaggc
ggagtctgccttggttgctccgaaaacaccgaaggagttaactgtcagtcatgcgtagac
ggctactacaggccgagtgaggtgagtccgcatgacccctggccctgcagaccctgctcg
tgtgacctgacgggttcactgcgctcttcatgtgtcccagacgagagccaggccaccgca
ggtttggcagtgggctcgtgcatctgtaagcagggatacgcaggtgagaagtgtgacagg
tgtgcgtttggatacacaggattccctctgtgtgagcgatgcagctgcagcagtgaaggc
agtgttaaccaggatccctgcaagccgccctgcgtgtgtaaggagcatgtggagggacag
aactgcgaccgctgtaaacagggattctataatctccgtggagaccgtctccgtggatgc
gagaagtgctactgttctggtctatccagcctgtgtgctgaatcccactgggactacagt
aatgtgacagacatgtcaggatggtatctgacaggagtggatggggaggggcttgtgtgg
gcggtgcccagcggagagacggcccaccagctcaccgtcagccaatcagatgcgcaggct
cacctgacagcaccgtattactggagtgccccgactgcttacctgcgcaagaaactcttg
gcgtacggaggccggctggagtactggctgtcttatgacaccgagagcagagacgagccc
gttcgcatccgcagcgctcctgatgtcatcattgagggcggcgggttgaggttgattgac
agcagctccggggtcgcggtgtatccgttctccacagctgcgcgcgggatagatctcctg
cccgagagctttcagcatcacgcctcaggaccgaccgtcagtaagagagacttccacagc
gtcctcaacaacatccagcggctgctgctccgggcctcctacacccaggaacacagcgcc
atctacaggttgggtcgtgtgagtatgagcgtggctgctgaaggctctggcagcggcttt
aaagcccaatctgtggaggtgtgtcagtgtcctcctggataccacggcacttcctgtgag
atgtgtgcggcgggctaccgcagggtgaacgggacgctgtaccgcggtgtgtgtgaactc
tgtcgatgccacggacacgcggagcgctgtgatgacgtcactggacactgcctgggctgt
agggatgacacggtcggaccgtactgtgaccagtgtgctcctggatattacggagacgcc
agcggaggatctgcagacgactgtcagccttgcgcttgtcctcttctcagcccatcaaac
aatttcagccccacgtgtcacgtcgaggccagcggtgaggtgatctgcgatcgatgcccg
ccgggttacacgggcacacgctgtgacaggtgtgccaatggctattttggtcgtcccaac
atacctgggggttcctgtcagccgtgtacgtgtaacgggaacctggatcttacagcggag
ctcagctgcgaccctttgaccggagcctgtctgcgctgtcacgagggattcggaggacca
gactgtgaaaggtgcgctgacggatactttggagatgcccttatagccaagaattgccaa
gcgtgtcggtgtcacacgaacgggtcgctctcagagcagtgccatcaggagaccggacag
tgccagtgtcggcaacatgtggtcggacgtcattgtgacgagtgtatgtccggctcacac
atgcagggcgctcaaggctgcgtcccatgccactgcaactcattcggatcgaagtcgttt
gattgcgacgagagcggtcagtgtcgctgtcagccgggcgtgacgggacagaagtgtgac
cgctgcgctcccggacacttcagctttcaggaaggcggctgcacgccgtgccagtgcgcc
catgtgggaaataactgtgacgctaacacaggtcagtgtatctgtccgcccaacaccgtg
ggagagagatgtgacaaatgtgcgcccaaccactggggtcacgacatcagcagcggctgt
aagccgtgcggctgtaatgcgctggggtccgtggcacagcagtgtaacgtgaacaccggc
tgctgcatgtgccgcgagcagttcaggggcgagaaatgtgatgagtgcaagctaggttac
cgagacttcccacaatgcatttcctgccagtgctcggcggcaggctcgtcgctggacacc
tgcgatgcggagtctgggctctgtgcttgtgctgacagaagcggccaatgttcttgcaag
gtcaatgtggagggagtgaaatgtgaccgctgtaaggtgggctctttcggcctcagtcac
aggaatcctctgggatgcagtcagtgctactgcttcggcttgagcagctcgtgtacagag
gccacgggactcattcgcatgaggctgactctaatgccagaacagaccgttcttcctctc
gtggacaaatccagccgtcaggagatcacagcgggcgtgagctttcagcatcctgacatc
atcgctaacgctgatgtggttcagcagcatctgagtgagccgtactactggagactgcca
aaacagttcaaacgctcaatgataacggcctatggggggaagctgaagtacgccatctat
tacgaggctcgtgatgagacgggccgcacctcctacgagccccaggtcataataaaaggc
ggccctaacaaggacaaggtcatggttcgccacatgccagcgcttcagatcggccagctg
acccgtcacgagattgacataacggagcacgagtggaagcacagtgatgacaggccgatg
tctcgtgaggatttcatggacgtgctgtttcacgtcgaatacatcctcataaaggcctca
cacggtagtgtcatgagacacagcaggatttctgagatcactttggaggtggctgaggtg
gggtcaccctcgcaggacagcgaaatcgcccatcagattgagaaatgtgactgtcctctg
ggatacgccggtctctcttgtgaggaatgcgcggccgggttctacaggctctctcttcac
gccggtggagccgcgtccagagcaggattcggcacctgtgtccggtgccagtgcaacgga
cacagcgactcctgcgatcctgaaacagccgtctgccagaactgtcagcataacacagtc
ggtgataagtgtgagcggtgcgctgcagggttttacggtgtagtgcgcggctttcccaat
gactgcaaaccctgtgcttgtccactgctcaacccggagaacaacttcagtcccacctgt
cagacggagggttttaatgactaccgctgcagcgcctgtcctgaaggctacgagggaaaa
cactgtgaaaggtgcgcagctggtttccacggtaacccgagcgtgttgggcggccgctgc
gaggagtgtaagtgccacgcttacggggcattccccggcgcatgtgacccgctctccgga
cagtgccggtgccgagccggagccagcggcctgaagtgtgaccagtgcatggagaggcat
gtgtgtggccctcagggcatcgtgtcgtgtgacgacgactgcgtgggactcctgattcgt
gacatggatcgtctgctgcgtctgattggcagcgtcaatctcactctgcccctccccctg
ccgtataaagtgctgtatcgctacgagaacatgacagaagagctgaagcacatgctgtcc
cctcagagagccccggagagactgctgcagctggccgacagtaacctgggcagtctggtc
actgagatggacgagctgctgagccgggcgactaaagtgtctgcggatggggagcagacg
gcagcggacgccgagcggagccgcaaaggagcccaggacctggagctttacgtcaagaac
acgctgctggccgctgaagctttacgggacaaagcacgtgagctgaacgcaactctgggc
tcaagagacggggctcctgagaagagtgtaaacgagatgaacaacgaaatccaagccatg
ctcgcagaactgcgcaaacgccagctctccggcaagaaaaacatcgctgatgaagaactg
ggtgccgcagaggctcttttggcaagagtgaagcgtttgtttggagacccacaccaggcc
acggaggacctgaagaaagaggtcagtgataaaatgggcgattacaggcggaaactggac
gaagctcaggatctgctgagggacgcacacgacaaaaccaaacaggccgagggactgggc
atcagcaaccagctgaacctcgagcgtctgcagggaaagagggatgtggccggtgaaggg
aaaaaggaaatggaggaaattttggcagaaggagagaagatgctggacgaagctaacgct
ctctccgacagcgtcaaccggggcaaagaggagctggaggagatggccagagagctgggt
cccctgcacgatcagctggactttaaggtggagcggttgggtcgcggtctggacgacgcc
gtccctgatctgctgctgagagcggaggaccacgccagccagctcaacgattctgctgcc
atactcgacagtattctggctgaggcaaagaacctgtccttcaatgccaccgccgctttc
aacgcttacacaaacatcaagaactacatcgatgaggccgataaggtggccaaagaggca
aggaaaaccagcatcgatgctctacagctggcctcgggacccaaaggatctctgaaagac
caggccaagggttcggttcagaagagtcaccgtctatggaacgaggccaaagagctgcaa
aatgacgtgaaagaaaacggagacaatctgggtgatcttcagctcagactgaaaggagcc
aacaaaaagaacaaagacttacagaaaggcctgaacgacacaatggagaaactcaacgcc
atccctgatgatctggcaaccaagatccaggccactaagctgaaggcggcagaggccaac
gacacggccatagacgtcctcaaccgcctgaaggacatgaacctcaacctgatgggcctg
aagaggaaccacagcaagctggaggacgacgtgaagaaagccaacaacctgatcaaagac
ccggagaaaaacacaataattcatgcggccggagctaaagtcaaggatctggagaatgaa
gctgacaggttgctggagaaactgaagcccattcaggagctccaggacaacctgaagaaa
aacatctctcagatcaaagagctcatcaaccaggctcgcaaacaggccaactctatcaag
gtgtctgtgtcgtccggaggagactgtatccgcacctaccggccagagatcaagaagggc
cgctacaacaccatcatcctccatgtgaagacggtcgctgctgataacctgctcttctac
ctcggatcggccaaatacgtggatttcttggcgctcgagatgaggaagggcaaggtgaac
ttcctgtgggatgtgggttcgggggtcggccgtgtcgaatatcccgatctcgtcatcaac
gatggaaactggcatcggatcgaggcttcgcgtatcgggctgaacggcagtatcttagtc
catgcactggagggacccaaaacaggcatcttgccgagcctcagaagtgccagatccccc
gagagttacaccgtgctggacgtggaccagaacgcttacctgtttgtcggcggcatgctg
ggctcggtgaagaaggcagacgctgtgaaaaccaccacgttctcaggctgtatgggagag
acgtctctggatgggaaacccatcggcctctggaactacagagagagggacggggcttgt
gctggatgcgtggtcagtcctcagccggcggacactgaaggcacggttcagtttgacgga
gatggatacgcagctgtgagccgacccactcgatggaacccaaacgtctccacggtcatg
ttcaagtttcgcaccttctccaccgacgcgctcatgatgtacttcgccaccaaagacatg
aaggacttcatgagtgcagagctgagcgatgggagggtaaaagtgagttatgatctgggc
tcaggaaccggctccatcatcagtgacaaacgctataatgacggcaaatggaagtcgttc
accatgtcccgcatgaagaaagaagcaagcgtcgccatagtgaacatcgacactaacgag
gatgagcagatgcggatggcatctccgggtggagcgacaggcctcaacctgagggaggat
gagaggatgtatttcggcggtgtacctaaggctggaaactacaggccagaggtggttttg
aagagattctctggctgtatgaaagacattgaagtttcccgaacgccgtacaatttgctg
agcagcccggactacacaggactgaccaaaggctgctccattgagaacctgcacaccgta
agcttccccagacccgggtacatggagctgaagcccgtgtcgtttgatgtgggctcagag
atctctctctccttcagcacgaagagtgagaacggcatcatcctgttcggcagaggagga
ctgacctctatgacacagctcactcagggcctgacgcccgtccacatcccacgccgctct
cgcagacagaccggagagcccttcctgtctgtgcaactgaataaaggggctctggaggtg
ctggtgttcaccggcagcaggaatccacgcagagctttcagaaaagtggaaaagggaata
ctgcatgatggaagagagcactcactgcgaatccagagacttcagggagcatctttcact
gtgcaggtggatgaagagccacccttccagcagccattacccaatgatcatcctctgagc
atccatcgcctcttcatcggaggcatccctacagacatagaaacaggtgtacagcggccg
aacgtgccttttgagggctgcatctggaaccttctcatcaacactgtgcccgtggacttc
tctcagcccgtggcctttgagaacgcagagattggccagtgtcccgacctggccccgnnc
cccagccccgccccagaccccgaggaggaggaggaggaagagggagcggctccgcccaaa
ccagctctgaggcccacagaagcagctcggcctccaccgccagcctccaccgccacgccc
ctcgccgaggccacgcccatcacagacacgcccaccggtgttaaagaagctgcggtgtcg
tgcacagcggaggcggagcctgttgtgctggagctggccaaacagttcggtctgtccaga
aacagtcacatggcttttgagtttgacgacaagaaggtgaagaacaggctgatcatcgag
ttcgagatacgcacagaagctgcctcggggctggtcttctacatggccagaataaaccac
gccgacttcgccaccatccagctgaaggagggcatggctcacctgagctatgatctgggc
agcggaaacacctccgtcagcgtgccacgcatcatcaatgacggacagtggcacaagatc
cgcgtgacgagagagaagcagagaggattcctcgtgattgactcacgttactccaaacac
accagcagcccgaagaaagctgatattctggatgtggtgggaatgctgtatgtgggaggt
ttaccgctcaactacaccaccaaacgcatcggaccggtgctctacagtatcgacggttgc
attaggaacttcaagatgatgaatctgcccctcaacatggagcaacccacatctagctac
cgtgtgggctcctgcttcgccaacccagaaaaaggaacttattttgatggcacaggctat
gccaaagctgtggacacatatcgagtgggtaacgacgtgtccgtggatctggagttcagg
acggctcagagcagcggggttttgttaggggtcagcagccagaagatggacggcctgggt
atcgaactcgtcaacggaaagcttttcttccatgctgataacggagtggggcgcttcacg
gctgtatatgagccgaacccggaggcggggctttgtgacggacagtggcacacagtctcc
gcccacaagctgaagcaccgcctggagctcgttgtggacggtgagaagtccgaggcagcg
agtccagacgtccgctctgcctccgccgacaccaatgaccccgtgtatgtgggcgggtac
cccgagggtctgaagcagtttggactcactataaacacaccatttaaaggctgcatgaga
aatgtgaagatcactaaagctgggaagactctggagatccagatgaacaaagtcctggag
ctcaaaggagttcaacctctcacctgccctgctagttaa
DBGET
integrated database retrieval system
