Puntigrus tetrazona (Sumatra barb): 122324849
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Entry
122324849 CDS
T08985
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122324849 (taf5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptet03021
]
122324849 (taf5l)
03036 Chromosome and associated proteins [BR:
ptet03036
]
122324849 (taf5l)
Transcription machinery [BR:
ptet03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122324849 (taf5l)
Coactivators
SAGA/TFTC/STAGA complex
122324849 (taf5l)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
122324849 (taf5l)
STAGA complex
122324849 (taf5l)
TFTC complex
122324849 (taf5l)
SAGA complex
122324849 (taf5l)
SLIK complex
122324849 (taf5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
TFIID_NTD2
Beta-prop_TEP1_C
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
NBCH_WD40
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_EIPR1
WD40_RFWD3
RMC1_N
Beta-prop_IP5PC_F
Beta-prop_SPT8
PEP5_VPS11_N
Beta-prop_WDR19_1st
PROPPIN
Ge1_WD40
Beta-prop_WDR75_2nd
Nbas_N
WD40_like
TRIP13_N
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
122324849
NCBI-ProteinID:
XP_043075890
LinkDB
All DBs
Position
1:complement(26348591..26354198)
Genome browser
AA seq
595 aa
AA seq
DB search
MKRVRTEQIQYAVTQYLKRRQYIDTDASLKGVKLSQSAEEMAASLTVQTESSCANVVSSA
PCQSDPQQYETQFSRLRSFLQDAEAPVVKEVSGVLFPLFLYLHLDMARCGLKGALDSFYS
RFHSSFQQDPEQKAIVDLLRGAVTPQDVTSNPKLCSLLDHKYVVHLTDQAYSYLLRYLQS
DDNSAVCWALSTHVQVEVTAARRTDYQLYGAGTGAGNASSASSSSAEGAERAEVTAGLPQ
NEAALEALQDCIKRVREGAPSLTTVCFYAFQHTDQLLNTAEVSPDSRLLAAGFDNSAVKL
WSLRARKLKAGPHRTDVSKIRLACDVLEEEADDEDASGSEIKTLRAHSGPVYRTAFLTDG
SGLLSCSEDSTVRLWDLSSFTNTVLYRGHAYPVWDVDVSPCGLYFCTASHDRTARLWSFA
RTYPLRLYAGHLSDVDCVAFHPNSNYVATGSTDKTVRLWSTQQGASVRLFTGHRGPVLSL
AFSPNGKYLASAGEDQRLKLWDLASGSLFKDLRGHSDSITSLSFSQDSSLVASASMDNSV
RVWDIRSAHGGAPSDGSSSELIGQYTGSTNNVLNVQFMACNLLLVTGTALEKQEQ
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgtgcggacggagcagatccagtatgcggtgacccagtacctgaagaggaga
cagtacatagacacagatgcgtctctgaagggggtcaaactctcccagtctgccgaggag
atggcggccagtctgacagttcagacagagtccagctgtgcgaatgtggtgtcttcggcc
ccgtgtcagtccgacccgcagcagtacgagacccagttctccagactgcgctccttcctg
caggacgcagaagcgccggtggtgaaggaggtgagcggcgtcttgttcccgctcttcctc
tacctgcacctggacatggctcgctgcggcctgaagggagcgctagactcgttctacagc
cgcttccactcctccttccagcaggaccccgagcagaaagccatcgtagacctgctgcgg
ggagctgtcacgcctcaggatgtgacctcaaaccctaaactctgctcgctcctggatcac
aagtacgtggtgcacctgacggatcaagcatacagctacctgctgcgttacctgcagagt
gacgacaacagcgccgtctgctgggcgctcagcacacacgtgcaggtggaggtgacggcg
gcacgcaggactgactaccagctgtacggcgcggggaccggagcggggaacgcgagctcc
gcttcctcttcctccgcggagggggcggagcgcgcggaggtcacggccgggttacctcag
aacgaggcggcgctggaggcgctgcaggactgcatcaagcgcgtgagggaaggagcgcct
tcgctcaccaccgtctgcttctacgccttccagcacacggatcagctgctgaacacggcc
gaggtgtcgccggacagccgtctgctggcggccggcttcgacaactccgctgtcaagctg
tggagtctgcgggccaggaagctgaaggcgggacctcacaggaccgacgtgtccaaaata
agactggcctgtgacgtgctggaggaggaggcggacgacgaagacgcctcgggcagcgag
ataaagaccctgcgggctcacagcggccccgtgtaccgcacggcgttcctgacggacggc
tcgggcctgctgtcctgttcggaggactccacggtgcgcctttgggacctgagcagcttc
accaacaccgtgctgtaccgcggccacgcctaccccgtctgggacgtggacgtcagtccc
tgcggcctctacttctgcacggcgtcccacgaccgcaccgcgcgcctctggagcttcgcc
cgcacctacccgctgcgcctgtacgccgggcacctctccgacgtcgactgcgtcgcgttc
caccccaactccaactacgtggccaccggctccaccgataaaacggtgcggctgtggagc
acgcagcagggggcgtccgtgaggctgttcacgggccaccgcgggccggtgctgtcgctc
gccttctcgcccaacggcaagtacctggcctcggccggagaggaccagaggctgaagctg
tgggacctggcgtccgggagcctgttcaaggacctgcgggggcacagcgacagcatcacc
agcctctccttcagtcaggacagcagtctggtggcgtccgcctccatggacaactcggtg
cgggtgtgggacatccgcagcgcccacggcggcgcccccagcgacggctccagcagcgag
ctgatcggacagtacacgggcagcaccaacaacgtcctcaacgtgcagttcatggcctgc
aacctgctgctggtgacgggcacggcgctggagaaacaggagcagtga
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integrated database retrieval system
