Puntigrus tetrazona (Sumatra barb): 122324882
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Entry
122324882 CDS
T08985
Symbol
myom1a
Name
(RefSeq) myomesin 1a (skelemin) isoform X1
KO
K24495
myomesin
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122324882 (myom1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ptet04990
]
122324882 (myom1a)
Domain-containing proteins not elsewhere classified [BR:
ptet04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
122324882 (myom1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
V-set
Pur_ac_phosph_N
Tissue_fac
C2-set_2
C2-set_3
Motif
Other DBs
NCBI-GeneID:
122324882
NCBI-ProteinID:
XP_043075553
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All DBs
Position
2:14439752..14461713
Genome browser
AA seq
1484 aa
AA seq
DB search
MSESLKLQKEQQQRDLETRYESTYHQGSLSSVSRQSYAAYVKRSSSYGHKISKKEKKLST
LSKKEKRSRLAVDKEDEIIGYVVPVFRSSHLATQDLMETQEEVKEEGVGYVVMRNLFSRE
TDFKMRTVKKSRETSLRESAERLTLSRKMHEKEEFQKKMNPDSLTHPPEFIVKPRGQTVW
EGKSVTLHCTVAGWPKPRVAWYKNNVLIDAKSHPEKYFTESQYNMHSLEIKNCSFSDTAE
YRISALNVKGESSAFAPVIIKRFKEGEDMPERPHGFSPEYGVTFNTTIIDKFDVSFGREG
ETMSLGCTVIVYPTVKRYQPEIVWYRNGVALSPSKWVHMHWSGERATLTLVHLNKEDEGL
YTLRVNTKSGFDTHSAYVFVRDADVEEEGVPVAPLDVRCHDANKDYVVVTWKQPAVEGSS
SIIGYFIDRLEVGTHHWTQCNDTPVKYARFPVTGLIEGRSYTFRVRALNNSGVSRPSRAS
DPVVAMDPSDRARLRAGPSAPWTGMIKFTEEDPTVGVVPGPPTDLAVTEATKSYVVLSWK
PPIQRGHEGVMYYVEKCLVDTDTWQRVNTGMPVKSPRFALFDLAEGKSYSFRVRSCNSAG
VGEPSEETGATTVGDRLDLPSVPGPVIPIRNTDTSVVVCWGASKEVKNLVGYYIEVSVSG
SGVWAPCNNKPVKGTRFVCHGLSTTDKCVFKVKAVNAAGYSGSSAESEACIVQASIAVPS
PPTGVTLQERVRDYMVLGWQAPAKTGGAEIKGYYLDYRTVKDGLTSKWHEVNLQAVTGTS
YKVTDLKENVFYQFQVRAVNRAGISESSVLSLPLECKEWTVALPGPPHGLRVQEVRKDSL
VLLWDPPTFNGRSAVTGYYVDYKEENGRWRCVQERSTRNTYMKVTGLQEGVSYRLRVHAK
NLAGVGGPSKATDAILAETRPGTNEIVVDVDDDGVISLIFECSDLKENSQFVWSKNYEAF
TDTSRLTIETAGGRSRAIFNDPSLEDLATYSCFVTNTDGVSASYTLTEEGLKRLLEMSHD
HQYPIIPFKNEMAIELQEKGRVRFWAEVGKFTSNCQVEYVFNDNVIHEGKKYTMNFNKTT
GIIEMFMDLLEVTDEGTFTFNLVDGKATGRTSLVLIGEEFAELQKKSEFERAEWVRRQGP
HFVEYLSFEVTPECDVHLKCKVGNIKPGTEIAWFKDGIEIEEDDEDAKKIGKSDEVLIFD
IGKLVIKSEKAQRKKKPATEESPSKPKISKKDAGVYEVKLKDERGKDKTLLNLTDAGYQA
VLNEVFRVIANSSTELKVMSTEHGIILYSFVVHYMEDLRVGWLQKESKISHSDRVQCGVT
GEQLWLKINEPTEKDKGKYAIDIFDGKGGIKRVLDLSGQVWEEAFEEFKRLKAAAIAERN
RARVVGGLPDVVTIQEGKSLNLTGNVWGDPVPEVAWVKNEKPLLSDDHYTLKFEHGKFAS
ITIAAVTTVDSGKYALLVKNKYGTEAAEFTVSVYIPEDEAEKKE
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatccttaaaacttcagaaggaacagcagcaacgggaccttgagacgcgctat
gagagcacctatcaccaaggctccctgtcatctgttagccgccagtcttatgctgcttat
gtgaaaaggagcagcagctatgggcacaaaatttcgaagaaggagaagaaactgagcact
ctctctaaaaaagaaaagcgctcgcgcctggctgtggacaaagaagacgagatcattgga
tacgttgtgccggtctttagaagcagtcatttggctacccaggatctgatggagactcag
gaggaggtgaaggaggagggtgtggggtatgtcgtcatgaggaacctgttctccagggag
accgacttcaagatgagaactgtgaagaagtccagagagaccagtttgagagagtctgct
gaacgcctgactctgagcagaaagatgcatgagaaagaagaattccagaagaagatgaat
ccagacagtttgactcatcccccggagttcattgtgaaaccacgtggccagactgtttgg
gagggaaagagtgtgacactgcactgcacggtggctggatggcccaaacctcgcgtggcc
tggtacaaaaacaatgttttgattgatgctaagtctcaccctgagaaatacttcacagag
agccaatacaacatgcattctctggaaattaagaattgtagttttagcgacactgctgag
taccgaatctctgcactaaacgtgaagggagaaagttctgcatttgcccctgtcattatt
aaaagattcaaagaaggagaagatatgcctgaaaggccccatggtttcagccctgaatat
ggtgtgaccttcaacactaccatcattgacaagtttgacgtttcttttggccgtgaggga
gagaccatgagtttgggctgtacagtcattgtttaccctactgtgaaacgctaccagcca
gagatagtgtggtacagaaatggtgtcgccttgtcaccttctaagtgggtgcacatgcac
tggagtggtgagcgagccactttgacccttgtgcatctgaacaaagaagatgagggtctc
tacactctgcgtgtcaacaccaagtcaggcttcgacacccactctgcctacgtatttgtc
agagatgctgatgtggaggaggagggggttcctgttgctcctcttgatgtgcgttgtcat
gacgctaataaagactatgtggttgttacctggaagcagccagcagtggagggcagcagt
tccatcattggctacttcattgacaggttggaggtaggcactcatcactggacccagtgt
aatgacactccagtgaagtatgcccgttttcctgtcactgggcttattgagggccgctcc
tacacctttagggtcagagccctcaacaattctggtgtgagccgtccgtcccgggcctct
gaccctgtagttgccatggatccatcagaccgtgcccgccttagagctggtccctcagct
ccatggactggaatgatcaaattcactgaggaagaccccacagtgggggtggttcccggt
ccacctactgacctggctgtcactgaggctactaagagttacgtggtactgagctggaag
ccacccatccagagaggacatgagggtgtcatgtattatgtggaaaagtgtttggtggat
acagacacttggcagagggtaaacaccgggatgccagtgaagtccccccgctttgccctg
ttcgaccttgctgagggcaaatcctacagcttccgtgtccgtagctgcaactctgctgga
gttggagagccgtccgaagaaactggagcgactactgtgggagacagattggacctgccc
tctgtcccagggcctgttattcccatcagaaacactgacacgtctgtggttgtgtgctgg
ggggcatctaaagaggttaaaaatctggtgggctattacatcgaggtcagtgtcagtgga
agtggcgtgtgggctccctgtaacaacaaaccagtcaaaggcactaggtttgtgtgccac
gggctgagcactacggacaaatgcgtgtttaaggtgaaggctgtgaatgctgcaggatac
agtggaagcagcgccgaatctgaggcctgcattgtgcaagcaagcattgccgttccaagc
cctcccaccggtgtgaccctgcaagagagggtccgtgactacatggtgcttggctggcaa
gctcctgcgaagaccggtggagccgaaatcaaaggttactacctggactacagaacagtg
aaggatggactcacaagcaagtggcatgaagttaacctccaggcagtcactggcacatct
tataaagtgacagacctgaaggaaaatgtattctaccagttccaagtgcgtgctgtcaat
cgggctggtattagtgaatcctccgtactctctctccccttggagtgcaaggaatggact
gtggctcttccaggtcctcctcatggcctccgtgtccaggaggtgcgaaaagactctctg
gtgcttctgtgggacccacctacattcaatggccgcagtgctgtgactggatattatgtg
gactataaggaagagaatggcagatggagatgtgtccaagagagatccacgagaaatact
tacatgaaggtaactggtctccaagagggtgtttcctacagactgcgcgtccatgctaag
aatctggcaggtgttggtggaccctcaaaggcaactgatgcaattttggcagagacccgc
cctggaaccaatgagattgtggtggatgtggacgacgatggtgtgatctctctgatcttt
gagtgctccgatcttaaagaaaactctcagtttgtgtggtctaaaaactacgaggccttc
actgacacttctcgtctcaccattgagacagctgggggcaggtccagagccatctttaat
gacccgtctttggaagacttggccacttactcctgttttgtgactaacactgatggtgtt
tctgccagctacacactcactgaggaaggacttaagcgcttgctggaaatgagccatgac
caccagtaccccataattcccttcaaaaatgaaatggccattgagctgcaggagaagggc
cgtgtgcgtttctgggccgaagttggtaaattcacttctaactgccaagtggagtatgtg
ttcaatgataatgtcatccatgaaggcaagaagtacacaatgaactttaacaaaactact
ggcattattgagatgttcatggacctactggaggttactgatgaaggaaccttcacattc
aaccttgttgatggcaaagcaactggccgcaccagcttagtgcttattggagaagagttt
gctgagcttcaaaagaaatctgagtttgagagagcagagtgggtcagaaggcaaggtcct
cactttgtggagtatctcagtttcgaggtcactccagaatgtgatgtgcatctgaaatgc
aaggttggaaacatcaaacctggcactgagattgcctggtttaaggatggaattgagatc
gaagaggatgatgaggatgctaagaagatcggaaaatctgatgaagtgttgatctttgac
attggcaagcttgttattaagagcgaaaaggcacaacggaaaaagaaaccagcaaccgaa
gaaagtccaagcaagccaaaaatttcaaagaaagatgctggagtatatgaggttaaactg
aaggatgaaagaggaaaggacaaaactttgctgaacctgacagatgcaggttatcaagca
gtgctgaatgaagtatttagagttattgccaattcttccaccgagctcaaggttatgagc
acagaacatggaatcattctttattcatttgttgtacactatatggaagatctccgtgtt
ggctggcttcaaaaagaatctaagatctcccattcagacagagtgcagtgtggagtcacc
ggagaacagctgtggctcaaaattaacgagcccaccgagaaggataagggcaaatatgcc
attgatatctttgatggcaaaggcggcatcaagagagttcttgacctgtcaggacaagta
tgggaggaagcttttgaagaatttaagaggctgaaggcggcggccatagcagagagaaac
cgtgctcgtgtggtgggcggactacctgatgtagtcaccattcaggagggcaagtccctc
aaccttaccggcaacgtatggggtgatcctgttcctgaggtcgcctgggtgaagaatgaa
aaaccgcttttgtctgacgatcactacacgctgaagtttgagcacggcaagtttgccagc
atcaccatcgctgctgttacaaccgtcgactcgggcaaatacgccctgctggtgaagaac
aagtatggcacagaggccgcagagttcaccgtcagtgtctacatcccagaggatgaagcg
gagaagaaggagtaa
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