Puntigrus tetrazona (Sumatra barb): 122324908
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Entry
122324908 CDS
T08985
Symbol
cdh2
Name
(RefSeq) cadherin-2
KO
K06736
cadherin 2, type 1, N-cadherin
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122324908 (cdh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptet03036
]
122324908 (cdh2)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ptet04515
]
122324908 (cdh2)
04090 CD molecules [BR:
ptet04090
]
122324908 (cdh2)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
122324908 (cdh2)
Cell adhesion molecules [BR:
ptet04515
]
Cadherins
Major cadherins
122324908 (cdh2)
CD molecules [BR:
ptet04090
]
Proteins
122324908 (cdh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Stevor
DUF2304
CD34_antigen
DUF5385
DUF3139
Motif
Other DBs
NCBI-GeneID:
122324908
NCBI-ProteinID:
XP_043075590
LinkDB
All DBs
Position
20:10232030..10273927
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AA seq
893 aa
AA seq
DB search
MYRSGGVMLGLLAALQVAVQGTGAMPCQPGFTENEYNVMTADVITEGQVLLKVDFVDCGR
GSGLRFESGDPADFRIEADGTVFAARTLQLSDRKGRSLEIKAKDVKSQEEWLVHINFTQP
KQVPEILFPRHSVVVKGDGSVNRVKRDWVIPPVNVLENSRKQFPEELVKIQSDKDKSNTL
RYSVTGPGADQNPTGLFIIDPITGILSVTKPLDREHIPNFHLRAHAVDINGNQMENPIDI
IINVIDMNDNRPEFTHQIWNGTVDEGAKPGTFVMTVTSQDKDDPNTANGMLRYKILSQTP
ESPSSNMFTINNKTGKIITVAAGLDREKVPQYTLIIQATDMEGNPTYGLSNTATAVIRLL
DVNDNAPEFTRETFHGEVPENRVNVIVTNLTVTDKDEPGTTAWNAVYRIISGDPTGRFSI
PTDPVTNEGLVTVVKPIDFEMNRSFMLTVVAENEVPLASGIHRTRQSTSTVSIRVIDVNE
SPNFDPNPKQVKLEEGLPQWSMLATFTAHDPDRYMQQTIRYSKLFDPANWLEIDPNNGRI
STIAVLDRESPYVKNNLYNATFMAADNGVPPASGTGTLQIYLLDINDNAPRVFPQETEVC
ERPEPNAINITAVDGDLNPNAGPYAFELPNRPSDIRRNWTLTRISGDHAQLSLKISYLES
GIYELPISITDSGNLPMSNITYLRIKVCQCDHHGDCVDMERIMAAGLGTGAIIAILICII
ILLVLVLMFVMWMKRRDKERQAKQLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQP
DTLEPDMIKPVGIRRLDERPMHSEPNYPIRSAAPHPGDIGEFIHEGLKAADTDPTAPPYD
SLLVFDYEGSGSTAGSLSSLHSSSSGGDQDYDYLNDWGPRFRKLADMYGGNDD
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgttcgggaggcgtgatgctggggcttctcgccgctctgcaggtggcggtccag
ggcacgggggcgatgccgtgtcagccgggtttcaccgagaacgagtacaacgtcatgact
gccgacgtcatcaccgagggacaagttctgctcaaagtggatttcgtggactgtggccga
ggttccggcttgcgtttcgagagcggcgacccagcagatttccggatagaggccgacggg
acggttttcgcggcgcggaccctgcagctctctgacaggaaggggcggagcttggagatt
aaggccaaggacgtgaagtctcaagaggaatggctggtgcacatcaacttcacccaaccc
aagcaggtgccagagatactgtttccgaggcacagtgtggttgtcaagggcgacggcagt
gtgaatcgcgtgaaaagagactgggtcattcctcctgtcaacgtgctcgagaactccaga
aaacaattccccgaagagcttgtgaaaattcagtcagataaggacaagagtaacacactg
cgctatagtgtgactggaccaggagcagaccagaatcccaccggtctgtttatcatcgac
cccattacaggaatcctgtccgtcaccaaaccgctggacagagaacacatcccaaatttc
catctacgtgctcatgctgtagacatcaatgggaatcagatggagaaccccatcgacatc
atcatcaatgtcatcgatatgaacgacaaccggcccgagttcactcaccagatctggaac
ggaaccgtggatgagggcgccaaaccaggtacatttgtaatgacagtgacctctcaggat
aaggatgacccaaatacagccaacgggatgctcagatacaagatcctctcgcagacccca
gagagcccctcctccaacatgttcactatcaacaacaagaccggcaaaatcatcactgta
gctgcaggtctagatcgtgagaaggtgcctcagtacaccctgatcattcaggctaccgac
atggagggaaaccccacctatggtctgtccaacaccgccactgctgtcatacgcctgctg
gatgtcaatgacaacgctccagagttcacccgagagaccttccatggtgaggtcccagag
aaccgtgtgaatgtgatagtgacgaatctcaccgtgactgacaaagatgaaccggggacc
actgcctggaatgcagtgtaccgtatcatatccggggacccaaccggacgcttctccatc
cctaccgatcccgttaccaacgaaggcctcgtcaccgtcgtcaagccaattgattttgag
atgaatcgatcattcatgctgacggtcgttgctgaaaatgaggtgccactggcgagtggg
atccatcgcacccgccagtctacatccaccgtgtctatacgtgtcatcgacgtgaacgaa
agcccaaattttgaccccaaccccaaacaggtcaaactggaggaggggcttccgcagtgg
tcgatgctggcgacttttacagcgcatgatccagacagatatatgcaacagactattagg
tactctaaactatttgaccccgccaactggctagagatcgatcccaacaacggacgaatt
tccactattgctgtcctggacagagagtctccatatgtcaaaaacaacctctacaacgcc
acattcatggccgctgataacggtgtccctcctgcgagtgggacggggactctgcagatc
tacctgctggacataaacgataacgcacctcgagttttccctcaagaaacagaagtgtgc
gagaggcccgaacccaatgccatcaatatcacagccgtagacggagatctcaaccccaac
gctgggccctacgctttcgagctgcccaaccgtccctctgacatccgcaggaactggaca
ctgacacgaatcagcggcgaccacgctcagttaagtctaaagattagttacctggaaagt
gggatatacgagctgcccatcagcatcacagactcgggtaacctgcccatgtccaacatc
acctacctgcgcatcaaagtgtgccagtgcgatcaccacggcgactgcgtggacatggaa
cgcatcatggcagccgggctgggcaccggagccatcatcgccatacttatctgcatcatc
attctgctggtgctggtgttgatgtttgtgatgtggatgaagagacgggataaagagaga
caggccaagcagctgctgatcgatccagaggacgatgtgcgagacaacatactcaaatac
gacgaggagggtggcggagaggaagaccaggactatgatctgagccagctgcagcagccc
gatactctggagccagacatgatcaagcccgtcgggatccgccggctggacgagcgaccg
atgcactccgagcccaactatcccatccgttcggccgcaccccatcccggagacatagga
gagtttatccacgagggtctcaaggcggccgacaccgatcccacggcccctccgtacgac
tccctgctggtgttcgactacgagggcagcggctccacggccggatcgctcagctccctt
cactcgtccagcagcggaggcgaccaggactatgactacctcaacgactggggccctcgc
ttccgcaaactcgccgacatgtacggaggcaacgacgactag
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