Puntigrus tetrazona (Sumatra barb): 122324976
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Entry
122324976 CDS
T08985
Symbol
trpa1a
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1a
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptet04040
]
122324976 (trpa1a)
Ion channels [BR:
ptet04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122324976 (trpa1a)
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
122324976
NCBI-ProteinID:
XP_043075718
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Position
2:complement(14105263..14113735)
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AA seq
1120 aa
AA seq
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MTKKTETTHISRTESKSRQQSYDSVMDGDESNQISANVFEWTKQGNIDALEKHTRYLDIR
DNIGASPMHYAASMGHFRIVRLIVQFTGTQELNARDEEGNTPLHWAVQKDQPGSCSVLLT
QGADPNILNNSQLSPLHMAVSLGKNFVLEQLVSHKQTDVNLEGDLGNTPVILAASLDNHE
ALVILYKHGAKFCRQNKLGHFPIHAAAFAGAKKSMEVILLKGEEVGLSIDTHINYVDKSC
SSPLHLAVRGGNLDVIKLCIAYGAKIEQQQCDKSTALHFACSQGATEVVKVMLSAYHKLC
DLINITDGANQTPLHKAAIFDHFELSEYLISQGADIDFVDCKGHSPLLLATSCGAWRTVN
LLLSHGAELKKKDKSGCNFLHLAILQPRGLKNLPTEVLQHESVRELLNDEDIEGCTPLHY
ACRLGIPESVKNMLGLEVSLDQKSKQKKSALHFAAEYGRINTCHRLLEMVTDTRLLNEGD
EKGLTPLHLASRGGHVKVVELLLRKGALFHSDYRGWSCLHHAASEGYTQTMDTLLTSNIK
LLNKTDGDGNTALHLAARAGHVAVVRLLLYRGAKIILNKNDASFLHEAVHNGRKEVTNTV
IESERCEEAMTTYKPNSTKRCIVMDMIEFLPESFKHLLDTCIKESEEDVNSTNYYIEYNF
RWLQHPLQNLKKTGLGKDNTYKPLSALNAMVNFNRVTLLTHPVCKKYLEMKWNAYGIKAH
LLNMTVYALGVFPLTYLIVNLKPTLVTARNVTSVNMVCTSLYKQSYIVTTSMLLVLAMNM
YAVGKEILQMTQQRLNYLRDLSNYMDWGAAICSLVFVVPMLLNAKSSWHWQAGALAALAS
WMNLLLYLQRFERIGIYVVMFREISRTLLSIIVLFFYLILGFALAFYALMIEQQHFGRMF
LSLLQTFVMMVGEINYQDNFLKPFLQGDLPFPLLTLAIFIWFVLLVPILLMNLLIGLAVG
DIAEVQTNACLKRIAMQIELHTNLEERLPYWFMKRVDQVTIKEFPNRCFSGKKRWFFGVN
EVRRSRTRLSPTIHQLTPLERELTKQKYRLKEMSETMEKQHNLLKLVVQKMEISSEAEEH
DGPPVFQELKEKLLTRSKWGPLLRAVTARKKGVCKFMKTA
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaaaaacagaaacgacacatatctccagaacggagtcaaaatctagacaacag
tcatacgacagcgtgatggatggggacgagagcaaccagatatctgccaatgtttttgag
tggactaagcaaggaaacatagacgctctggagaagcacaccaggtacctggacatacgt
gacaacatcggtgccagcccaatgcactacgccgcatccatgggacactttcgcatcgtc
agactaatagtgcagttcactggaacacaagagctcaatgccagggatgaggaagggaat
acccctcttcattgggctgtgcagaaggaccagccaggaagctgctctgtgcttctgact
cagggagcagatcctaacatcctaaacaacagccaactgtcaccgctacatatggcggtc
agcctgggtaaaaattttgtgttagagcaacttgtctcacataaacaaactgatgtgaac
ctggaaggggacttgggaaacacccctgtcattttagctgcttctttggacaaccacgag
gctctggtcatactgtacaagcatggtgcaaagttttgtcgtcagaacaagcttggccat
tttccgattcatgctgctgcttttgccggagctaagaaatctatggaggtcattcttctg
aaaggagaagaagttggactgtctattgacacccatataaactacgtggataaatcttgc
agcagtccgctccacctggccgtacgtggaggaaatctcgacgtcattaaactctgcatt
gcgtatggagcaaaaattgaacagcagcagtgtgataaatccactgctcttcattttgcg
tgcagtcaaggtgccactgaggttgttaaagtcatgctctcggcttatcataaattgtgt
gaccttatcaacatcactgatggggccaaccagacacctctacataaagcagccattttt
gatcattttgaactctcggagtaccttatctcacagggtgctgacattgactttgttgac
tgcaaaggccattctccacttcttctggcaacaagctgcggagcatggagaacagtcaat
ctgctcctctcccatggagctgagctgaagaaaaaagacaaatccggttgcaacttcttg
catttggctatcttgcaacccaggggtttgaaaaacctgcccacagaggtactgcagcac
gagagcgtgagagagcttctcaatgatgaggatattgagggctgcactcccctccattac
gcctgccgactgggaataccagagtcagtgaagaacatgctgggattagaggtctcgctg
gaccagaagtccaaacagaagaaatctgcacttcattttgcggcagaatatgggaggatc
aacacttgccacagacttctggagatggtgacagacacgagactgctgaatgagggggat
gagaaaggactgaccccgctgcatctggcctctcgtggaggtcacgttaaagtcgttgag
cttctcctacgcaagggagcgctgtttcacagtgactacagaggatggtcatgccttcat
catgctgcgtctgaaggatacacgcagaccatggacactttgctgacatctaacatcaaa
cttctgaacaaaaccgatggagatgggaacacggctttgcatctggccgccagggcaggt
catgtggctgtagtgagactgcttttatacagaggggccaagatcatccttaacaagaac
gatgcctctttcctgcacgaggccgtacataatgggaggaaggaagtcaccaacacggtg
atcgagagcgaaagatgtgaagaggcgatgactacgtacaaaccaaactcaacaaaacgt
tgcattgtcatggacatgattgagtttcttccggagtcctttaaacatcttctagacact
tgcataaaggaatcagaggaggatgtgaacagcaccaattactatattgagtacaatttc
aggtggcttcagcatcctctgcaaaacctgaaaaagacaggtttgggaaaagacaacacc
tacaagcctctcagcgcactaaatgctatggtgaattttaatcgcgtcactttgctgaca
catccagtatgcaagaaatatttggagatgaaatggaatgcctatgggatcaaagcacat
ctgctcaatatgactgtgtatgcgctgggggtgtttccactgacgtatctcattgtgaac
ctgaaacccacattagtcactgcaagaaatgtcacatcagtcaacatggtctgcacgtcc
ctgtacaagcaatcctatatagtcacaacaagcatgctcttggttcttgcaatgaatatg
tatgcagttgggaaagagatcttgcaaatgactcagcagcggctgaattatttgcgggat
ctgtcaaactacatggactggggcgctgcgatctgttctctggtgttcgtggtgccgatg
ctgctgaacgccaagagctcctggcactggcaggctggggcactggcagctctggcctcc
tggatgaacctcctcctctacctccagcggtttgaacggattggtatatatgtggtaatg
tttcgggagatctcacggacgctgttgagcattattgtgctgttcttctacttgatactg
ggatttgctttggccttctatgccttgatgatcgagcagcaacattttggaaggatgttc
ctatcactgctgcagacctttgtcatgatggttggagaaatcaactaccaggacaacttc
ttgaaacccttcctacaaggagaccttcctttcccccttttgacactggcgatctttatt
tggtttgtcttactcgtgcctattctcctgatgaaccttctgattggtttggctgttgga
gacatagcagaggttcaaacaaatgcatgcttgaagaggattgcaatgcagattgaactt
cacactaatctggaggagcgtcttccttattggtttatgaaacgggtggaccaggtcacc
atcaaggagttcccaaacagatgcttcagtggaaagaaaagatggtttttcggtgtgaat
gaggtgaggaggtctaggacccgtctcagtcctaccatccaccagttaactccactggaa
agggagctaaccaaacagaaatacaggctgaaggagatgtcagagaccatggaaaagcaa
cacaacctgctaaagctcgtagtgcagaagatggagatcagctcagaagctgaagaacac
gacggacccccggtctttcaggagctgaaagagaagctccttaccaggagcaaatggggt
ccactgctcagggcagtgaccgccagaaagaagggagtctgcaaattcatgaaaacggca
tga
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