Puntigrus tetrazona (Sumatra barb): 122325140
Help
Entry
122325140 CDS
T08985
Symbol
pdgfra
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04010
MAPK signaling pathway
ptet04020
Calcium signaling pathway
ptet04144
Endocytosis
ptet04510
Focal adhesion
ptet04540
Gap junction
ptet04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122325140 (pdgfra)
04020 Calcium signaling pathway
122325140 (pdgfra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122325140 (pdgfra)
09144 Cellular community - eukaryotes
04510 Focal adhesion
122325140 (pdgfra)
04540 Gap junction
122325140 (pdgfra)
09142 Cell motility
04810 Regulation of actin cytoskeleton
122325140 (pdgfra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ptet01001
]
122325140 (pdgfra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ptet04090
]
122325140 (pdgfra)
Enzymes [BR:
ptet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
122325140 (pdgfra)
Protein kinases [BR:
ptet01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
122325140 (pdgfra)
CD molecules [BR:
ptet04090
]
Proteins
122325140 (pdgfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
Pkinase
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
V-set
Ig_5
Kinase-like
Motif
Other DBs
NCBI-GeneID:
122325140
NCBI-ProteinID:
XP_043075988
LinkDB
All DBs
Position
20:complement(11339863..11360039)
Genome browser
AA seq
1464 aa
AA seq
DB search
MGFLETHLVLGIVLLGVFSDVSKPWPVIHSDEKEFILLPHSEFTITCSGERKVIWHEPLP
PNSEVQSGFNHSTLIITDAEASNTGYYTCLYDGQPEKETEIYIYVQDPEVPFVSDPSVET
DEIGTTIPCRATNSNYQVILRNLQSGDEVSALYDHKIGFFAVFFAPGRYVCETNVNGKAV
QSIVYNVTNDEDAKDDDDDDYEEEEKSFNINLSASMEDVKEGDAVNLTCETPHGKAFHQQ
WLHPQVQARDAVPMKLTFPDKVQYILSIPKASVADTGRYECAVTNQITGKTKSLILGITV
HESSFVEVISNGIGPVEIVSLLEEKEFTIYIDANPEPKVRWFKDELELDDSYISTKTTHL
EGLRYENILVLRHPIEEDSGIYEIVASTGSRTSRFSFKLLVEAMYPELPQSVLAPVMWPQ
RDSMEVSLHSTFRLTCRGQAELTWYSPVYLHDQIDTEKKGLFISTVTVSNATAAHTGKYI
CFYDSSNNTEETSIYIYVPDPETPFVPSMMPFENHVLTSHDEMEIPCRVTDPSVSVSLIH
VETNQVLPSVYDSKRGFIGLFSAGTYVCRTIINGQTHNSIDYIVHGWTGGSDVQVELQAE
KKALLVGETITVDCVARNSEILEDHWKYPGKLAGRGIKTVKENKRDLEIHYTLTVANASP
KDSGVYACSITDVKSNESQTKQLTITVYDHEFVHISPAIGPVETTRLDEVREFRVDIQSF
PAPKVTWLKDGSVLGDVAAEITTSLLKIDETSYQGVLTLIRAKAEDSGNYTIRAETGSQT
ASNSFYLQVKVPPVIVDLMDIHHGSAAGQEVVCITGGSPAPDVDWYICKNIKQCANDSSQ
WMPLPINSTDIKVEVQMDVDNNIESHIIFHHLESTIAVRCLARNDMGAVSREVKLVSNGP
HSELTVAAAVLVLLVIVIISLIVLVIIWKQKPRYEIRWRVIESVSPDGHEYIYVDPMQLP
YDSRWEFPRDSLVLGRVLGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQAL
MSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDGFLSRHTEKG
KKELDIFGINPADESSRSYVILSFEGKGDYMDMKQADTMQYVPMLEMNEASKYSPIQRSD
YDHPPSHRQLNESEVENLLSDDTSEGLTTVDLLSFTYQVARGMEFLASKNCVHRDLAARN
VLLSQGKIVKICDFGLARDIMHDNNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGI
LLWEIFSLGGTPYPGMIVDSSFYNKIKSGYRMAKPEHASSDVYELMMKCWNSEPEKRPSF
HSLSDTVASLLPSGYKRCYERVNHDFLKSDHPAVTRVQCVDNDDAYMGVLYKNQGKLKDR
ESGFDEQRLSSDSGYIIPLPDLDPLSNEDYSKRNRHSSQTSEESAIETGSSSSMTKREGE
TLEDITLLDEMCLDSGDLVEDSFL
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atggggttcctggagacacatctcgttttggggattgtcttattaggggtattttcagat
gtttcgaaaccttggccggttattcattcggatgaaaaggaatttattctcctacctcat
tctgagttcaccatcacttgctccggagagaggaaagtgatatggcatgagcctttgccc
cccaacagtgaagtgcagtccggattcaatcacagtactttgataatcactgatgcagag
gcctctaacacaggatactacacctgtttgtatgatggtcaacctgaaaaagagaccgaa
atctacatttatgttcaagatcccgaggttccattcgtgtcggatccttccgttgagacg
gatgaaataggcacaactatcccctgccgtgctacaaactccaattatcaagtgattctc
agaaacctgcagagtggggatgaagtctctgcgctttacgaccacaaaattggctttttt
gcagtcttttttgcaccgggtcgctatgtctgcgagacgaacgtgaatggcaaagcggtg
cagagcatcgtttataacgtgacaaacgacgaggatgccaaagatgatgacgatgatgat
tatgaagaagaagaaaagagcttcaacataaatctgagtgccagcatggaggacgtgaaa
gagggggatgctgtcaatctgacctgcgagacgcctcatgggaaagctttccaccagcag
tggctgcatccccaagtgcaggccagagatgctgttccaatgaagttaacattcccagac
aaggttcagtacatcctcagcatcccgaaagcctctgtggcagacactggacgttatgag
tgtgctgttaccaaccaaatcactggaaaaaccaagtccctcatcctgggaatcacggtc
cacgaaagctcttttgtggaagtaatatctaatgggatcgggccagtggagatcgtgtcg
cttctggaggaaaaagagttcactatttacattgatgctaaccctgagccaaaagtcagg
tggtttaaagatgaactcgagctggatgacagctacatctccaccaagaccactcatctg
gaaggcctcaggtatgagaatattctggttctccgtcaccccatagaggaggacagtggc
atctatgagattgttgcatccactggttccaggacctcaagattttcattcaaactgcta
gttgaagccatgtacccagagctgccacagtcggtgctggctccagtcatgtggccccag
agggacagcatggaggtgtctctccactccactttccgactcacgtgtcgaggtcaggct
gagctcacctggtacagtcctgtttatctccacgatcagatcgacactgaaaaaaaagga
ctcttcatctccactgtgactgtgagcaatgcgacggccgcccatacaggaaaatacatc
tgcttctatgactccagcaacaacactgaggagacctccatctatatttatgtgccagat
ccagaaacgccgtttgtgccgtccatgatgccttttgaaaaccatgtactgacgagtcat
gatgaaatggagataccctgccgcgtgacggaccccagcgtcagcgtctctttgattcac
gtcgagaccaatcaggttctgcccagtgtctatgacagcaagagaggattcattggccta
ttcagtgctgggacatatgtctgcaggaccatcattaacggacagacacataacagcata
gattacatcgttcatggctggacaggagggtctgatgtgcaagtcgagctgcaagcagag
aagaaagctctgctggtgggtgagaccatcactgttgactgtgtagccagaaacagtgag
atactggaggaccactggaaataccccgggaagctggcgggtcgaggaataaagaccgta
aaggagaataagcgagatcttgagatccattacactctgacagtggctaatgcctcaccg
aaagacagcggcgtctacgcttgctccatcaccgatgttaagagcaacgagagccaaacc
aaacagctcactattacagtctatgatcatgagttcgtgcacataagtccggcgatcggt
ccagtggagaccacaaggctggacgaggtgcgagagttcagggtggacatacagtctttc
cccgctcccaaagtcacatggttaaaggacggatcggtcctgggagatgttgcagcagaa
atcaccaccagcctcctaaaaatcgatgagaccagttaccagggtgtgctgaccctgatc
agggctaaagcagaggacagtgggaactataccatcagggcagaaacaggcagccagact
gccagcaacagtttctacctccaggttaaagttccccctgtgattgtggacctgatggat
atccaccacggctctgctgcaggtcaggaagtggtgtgtattactggcggctcccctgcc
cctgatgtcgactggtatatctgcaaaaacattaaacaatgtgccaacgattcctcccag
tggatgccgcttccgatcaactctacggacatcaaagtggaagtgcaaatggatgtggac
aacaacattgagagtcacatcatcttccaccatcttgagagcacaattgctgtgcgctgt
ctggccaggaatgacatgggcgctgtttcacgagaggtcaaactcgtgtcgaatggtcct
cactcggagctcactgtggctgctgctgttctggtgctgctggtcattgtcatcatctca
ctcattgtgctggtcattatctggaaacagaaaccacgttatgagatcagatggcgtgtg
attgaatctgtcagtccggatggtcacgagtacatctatgttgaccccatgcagcttcca
tatgactcccgctgggagttccctcgggattcacttgtactgggtcgtgtcctaggctca
ggagcatttgggaaagtagtggaaggcactgcttatggactcagtcgttctcaacccgtg
atgaaagtggcagtgaaaatgcttaaaccaacagcacgctccagcgagaaacaggctttg
atgtcagagctgaaaattatgacccacctgggccctcacctaaacattgtcaaccttctg
ggagcatgcaccaaatcaggaccaatctacattatcacagagtactgtttctatggcgac
ctagtgaattacctgcataagaacagagatgggtttctcagccgccacacagaaaagggc
aagaaagagctagacatctttggcatcaacccagctgatgagagtagcaggagctacgtc
atcctgtcttttgaggggaaaggtgactacatggacatgaagcaggcagacaccatgcag
tacgtccccatgttggaaatgaatgaagcctcaaaatactcccccatccagagatcagac
tatgaccatcctccatctcacagacagctcaatgagagtgaagttgagaaccttctctca
gatgacaccagtgaaggcctgacgacagtggacctcctcagtttcacctatcaggtggct
cgagggatggagttcttggcctctaagaactgtgtacacagagacttggctgcacgtaat
gtcctgctgtctcaaggcaagatagtgaagatctgtgactttggactggccagagacatc
atgcacgataacaactacgtctccaaaggaagtactttccttccagtgaaatggatggcc
cctgagagcatctttgataacctgtacactacactcagtgatgtctggtcctatggcatc
ttattatgggagatcttctctcttggagggactccttatccaggtatgattgtggattcc
agcttctacaacaagatcaagagtggataccgaatggcaaaacccgagcacgcttccagt
gatgtctatgagcttatgatgaagtgttggaacagtgaaccagaaaagagaccatctttc
cacagcctgagtgatacggtggcctctctgctgccttcaggatataagaggtgctacgaa
cgcgtgaatcatgacttcctgaagagcgatcaccccgctgtgactcgggtgcagtgcgtt
gacaatgatgatgcatacatgggtgtgctctacaagaaccagggcaagctgaaggaccgc
gagagtggctttgatgaacaaaggctgagctctgacagtggttacatcattcctctgccg
gacctcgacccgctgtcaaatgaagactacagcaagaggaaccgccacagctctcagacg
tcagaagaaagcgcaatagagacaggctctagcagctccatgacgaagcgcgagggagag
acgctagaggacatcaccttgctggacgagatgtgcttggactcaggagacctggtggag
gacagtttcctgtga
DBGET
integrated database retrieval system
