Puntigrus tetrazona (Sumatra barb): 122325173
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Entry
122325173 CDS
T08985
Name
(RefSeq) LOW QUALITY PROTEIN: procollagen galactosyltransferase 1-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet00310
Lysine degradation
ptet00514
Other types of O-glycan biosynthesis
ptet01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
122325173
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
122325173
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ptet01003
]
122325173
Enzymes [BR:
ptet01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
122325173
Glycosyltransferases [BR:
ptet01003
]
O-Glycan biosynthesis
O-linked Gal type
122325173
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
122325173
NCBI-ProteinID:
XP_043076092
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Position
1:28679575..28688871
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AA seq
649 aa
AA seq
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MVTARVSLASRRSASLLPLLLLSPRRRFLVSPAMRLLSLFVLLLWTGPARGYFPEERWSP
ESALLAPRVLLALVCRNSAHSLPHVLGAIDRLDYPKDRVAVWVCVDHNSDNTTACVCARD
XVRVCELYHYVEWRPVRSVCETVAYEDESGPKHWTNLRYEHVMKLRQAALDTAREMWADY
FLMVDCDNLLTNRDVLWKLMRENKTIVAPMLESRAAYSNFWCGMTSQGYYKRTPAYMPMR
RQERRGCFAVPMVHSTLLLDLRKEASRELAFFPPHPDYSWAFDDIIIFAFSARMADVQMY
ICNRETYGYFPVPLRSHNTLQDEADSFLHSLLEVSVRNPPLEPSVHLSLPPKHPDKIGFD
EVFMINLLRRSDRRERMLRTLYEQEIACKIIAAVDGKALNVSQIDARGDPDDAADTALGI
QMMPGYSDDHXGRSLKLGCFLSHFNIWTEIVDRGLQASLVIEDDLRFEVFFKRRLQNLMQ
EIESQRLDWDLIYIGRKRMQVDRPEKAVPRIHNLVEADYSYWTLGYAISLQGARKLLRAE
PLRNMLPVDEFLPVMYNKHPIEDYMSHFKRRDLRAFSAEPLLVYPTHYTGDAGYISDTET
STVWDNETVLTDWDRARSRKSREQEELSSEAQNSDVLQSPLDSAARDEL
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggtcactgctcgcgtgagtctcgcgtctcgccgctccgcttcccttcttccgcttctg
cttctttcgccccgccggaggtttctcgtttctccagccatgcgtctgctgagcctcttc
gtgctgctgctctggaccggaccggcccgcggttacttcccggaggagcgctggagcccg
gagtccgcgctgctcgcgccgcgggtgctgctcgcgctggtctgccgcaactcggcgcac
tctctcccgcacgtcctcggagccatcgaccgcctcgactaccccaaggaccgcgtggct
gtatgggtgtgtgtggatcataattcagacaacaccaccgcgtgtgtgtgtgcgagagat
ngtgtgcgtgtgtgtgaactctaccattacgtggagtggagacctgtgaggagtgtgtgt
gagactgtcgcctacgaggacgagagcggcccgaagcactggacgaacctgcgctacgag
cacgtgatgaagctgcggcaggcggccctcgacacggcgcgcgagatgtgggccgactac
ttcctgatggtggactgtgataacctgctgaccaaccgggatgttttgtggaagctgatg
cgggagaataagacgatcgtggctccgatgctggagtccagagcggcctactccaacttc
tggtgcggcatgacctctcagggttattacaagcgtactccggcctacatgccgatgcgc
aggcaggagcgccggggctgcttcgccgtacccatggtgcactccaccctgctgctggac
ctgaggaaggaggcgtcccgagagctggccttcttcccgcctcatcccgactacagctgg
gccttcgacgacatcatcatcttcgccttctcggcgcgcatggccgacgttcagatgtac
atctgcaacagagagacgtacggctacttccccgtgcccctgcgctcccacaacaccctg
caggacgaggccgacagcttcctgcactcgctgctggaggtctcggtgcgcaatcctcct
ttagagccgtccgtgcatctctctcttcctccgaaacacccggataaaatcggcttcgat
gaggtgtttatgataaacctgctgaggcgttcggatcgcagagagcgcatgctgaggact
ctgtacgaacaagagatcgcctgcaagatcatcgcagccgtagatggcaaggcgctgaac
gtcagtcagatcgatgcgcgtggggatccagatgatgccgcggatacagcgctggggatc
cagatgatgcccgggtacagcgacgatcactaaggccgctcactaaagctgggctgcttt
ctgtcgcacttcaacatctggacagagatcgtggatcgggggctccaggcgtctctggtg
atcgaggacgacctgcgcttcgaggtgttcttcaagcggcgtctgcagaacctgatgcag
gagatcgagtctcagcggctggactgggacctgatatacatcggccgcaagcggatgcag
gtggaccggccggagaaagcggtgcccaggatacacaacctggtggaggccgactactcg
tactggacactgggatacgccatctccctgcagggcgcccggaagctgctgcgggccgaa
ccgctcaggaacatgctgccggtggacgagtttctgcccgtcatgtacaacaaacacccc
atcgaggactacatgtctcacttcaagcggcgggatctgagggcgttctcggccgagccg
ctgctggtttaccccacgcactacacgggcgacgcgggctacatcagcgacaccgagacc
tccaccgtctgggacaacgagacggtcctcaccgactgggaccgagcgcgatcgcgcaag
agccgggaacaagaggagctgagcagcgaggcgcagaactcagacgtgcttcagtctcct
ctggacagcgccgcccgagacgagctctga
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