Puntigrus tetrazona (Sumatra barb): 122325285
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Entry
122325285 CDS
T08985
Name
(RefSeq) SNW domain-containing protein 1
KO
K06063
SNW domain-containing protein 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03040
Spliceosome
ptet04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122325285
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
122325285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptet03041
]
122325285
Spliceosome [BR:
ptet03041
]
Complex B
Other components
Prp19-related factors
122325285
Complex C
122325285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
122325285
NCBI-ProteinID:
XP_043076200
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All DBs
Position
20:3999639..4006286
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AA seq
536 aa
AA seq
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MSLASFLPAPTQLSQDQLEAEERSRLQRSQSTALVSTRREPPPYGFRKSWVPRSLEDFGD
GGAFPEIHVAQFPLEMGRKKRTSNALAVQVDAEGKIKYDAIARQGQSKDKVIFSKYTDML
PKEVLNVDDPELQKPDEEAVQELTEKTRAALEKQVSQKIAAAMPVRAADKQAPAQYIRYT
PSQQGLAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVEKKMAQKEKEKKEEKLRELAKMARDRRAGIKAHGDKGGEDTEVRERDEIRHE
RRKERQHDRNISRAAPDKRSKLQRDQDRDISELIALGQPNPRTSSEAQYDQRLFNQSKGM
DSGFAGGEDEMYNVYDQPFRGGRDMAQNIYRPSKNADKDMYGDDLDTLMQSNRFVPDREF
SGADHGPGRDGPVQFEEDPFGLDKFLEEAKQHGGSKRASTSGRSKDYDHEKKRRKE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctggcgagttttctccctgcaccaacccaactgtcccaggaccagctggaggca
gaggagagatctcgtcttcagaggtcccagtccactgctttggtctccacccgcagagaa
cctcctccttatggcttcagaaaatcatgggtgccccggtcactggaggactttggagat
ggaggagcttttccagagatccatgtggcccagtttcccctggaaatgggtaggaagaaa
aggacctccaatgctctggcagtgcaagtggatgcagagggcaagatcaaatatgatgcc
attgctaggcaaggtcaaagcaaagacaaggtcatattcagtaagtacacagacatgctt
cctaaggaagtgctaaacgtagatgatcctgagctgcagaaacctgatgaagaggccgta
caagagcttacagaaaagaccagagcagctttggagaaacaggtctcacagaaaattgca
gccgccatgccggtacgtgctgcagacaaacaggccccagcgcagtatatcaggtatacg
ccttcacagcaaggactcgcatttaactctggagcaaaacagagagtcatccgtatggtg
gaaatgcagaaggacccaatggaacccccacgtttcaaaatcaataagaaaattcctcgt
ggacctccatcccctcctgctccagtcatgcactctccaagcagaaagatgacagtgaaa
gaacagcaggagtggaagattccaccttgtatatcaaactggaagaatgcaaagggttat
accattccactggacaagcgtttggctgctgacggacgaggacttcaaactgtccacatc
aatgagaactttgccaagctggctgaggctttgtacattgcagacagaaaggccagagag
gctgtggagatgagagctcaagtagaaaagaagatggcccagaaggagaaagaaaagaaa
gaggagaagctgagagagctggctaaaatggctagggacaggagagctgggatcaaagcc
catggtgacaaaggtggtgaggacacagaagtcagggagcgtgacgagatccgccacgag
aggaggaaagaaaggcagcatgacaggaacatctccagagccgcccctgataagaggtcg
aaactacaaagagatcaggacagggacatcagtgaactcattgcccttggccagccgaac
cctcgtacctccagtgaggctcagtatgaccagagactctttaatcaaagcaaggggatg
gacagtggttttgctggtggagaggatgagatgtataatgtgtatgatcagcccttcaga
ggtggcagagacatggcacaaaatatttacaggcccagtaagaatgcagataaggacatg
tatggggatgacctggacacactcatgcaaagcaacaggtttgttcctgatagggagttc
tcaggtgctgaccacggccccggccgggacggccctgtgcagtttgaggaggatcctttc
ggtctggacaagttcttggaagaagccaaacagcacggcggctccaaaagggcgtccact
agtgggcgctccaaagactacgaccatgagaagaaacgcaggaaggagtga
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