Puntigrus tetrazona (Sumatra barb): 122325318
Help
Entry
122325318 CDS
T08985
Symbol
si:dkey-183n20.15
Name
(RefSeq) RING-HC_RNF170 domain-containing protein
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptet04121
]
122325318 (si:dkey-183n20.15)
Enzymes [BR:
ptet01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122325318 (si:dkey-183n20.15)
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122325318 (si:dkey-183n20.15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_2
zf-C3HC4_2
zf-RING_5
DUF1232
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
122325318
NCBI-ProteinID:
XP_043076262
LinkDB
All DBs
Position
20:complement(13322659..13326578)
Genome browser
AA seq
226 aa
AA seq
DB search
MPTFHNRSPLLSKIRSQGQPHNPHVNKREDLPTMWLPAGNRDNHCPVCLQIASYPVETNC
GHLFCAPCLISYWKHCSWLDAISCPLCRQTVNKMCHLFRETRADCKETEVLKHVRDYNKR
YSGAPRQVKDYLCDTPLFLLFLVRWLGNMGGLVWLFLLRVAVCGFGAAMSLASPLETLPG
PLSSVLGMLDDFVVVFLLLICIININQQMGPQRTRTHSQGVLTDTL
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccttccacaacaggtctcctctgctctcaaagataaggagtcaaggccagcca
cacaaccctcacgtgaacaaaagagaggatttacctacaatgtggttgccagcaggcaac
agggacaatcactgtcctgtctgtttacagatcgccagctatcctgtagagaccaactgt
gggcatcttttctgtgctccatgtctgatatcttactggaaacactgctcctggttagat
gccatcagctgtcctttgtgcagacagacggtgaataagatgtgccatctcttcagagag
accagagctgactgtaaagagacagaagtgctcaaacacgtcagagactataacaagcgc
tactctggagcaccaagacaggtgaaggactacctgtgtgatacacccctcttcctgctc
tttctggtgcgatggctggggaacatgggtggcctggtgtggctgtttctcttgagggtg
gccgtctgtggttttggcgctgccatgtctttggcctccccgctggagactcttcctggg
ccgctgagcagcgtgctgggcatgctggatgattttgtagtggtcttccttcttctcatc
tgcattataaacatcaaccagcagatggggccgcagaggacaagaacacactcgcagggt
gtgctgaccgacacgttgtaa
DBGET
integrated database retrieval system
