Puntigrus tetrazona (Sumatra barb): 122325476
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Entry
122325476 CDS
T08985
Name
(RefSeq) cadherin-2-like
KO
K06736
cadherin 2, type 1, N-cadherin
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122325476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptet03036
]
122325476
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ptet04515
]
122325476
04090 CD molecules [BR:
ptet04090
]
122325476
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
122325476
Cell adhesion molecules [BR:
ptet04515
]
Cadherins
Major cadherins
122325476
CD molecules [BR:
ptet04090
]
Proteins
122325476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_3
Stevor
CD34_antigen
DUF4381
DUF5385
Motif
Other DBs
NCBI-GeneID:
122325476
NCBI-ProteinID:
XP_043076457
LinkDB
All DBs
Position
20:complement(11141945..11182183)
Genome browser
AA seq
938 aa
AA seq
DB search
MVTARDRAGNYIWETTVKLALAGHLLSPPVNQFAGDGIYGGSSHNHYQNPRLITFPRQHQ
RGSSNGLRRQKRDWVIPPINVPENSRGPFPQVLVRFAVDFVDCGRGSGLRFESGDPADFR
IEADGTVFAARTLQLSDRKGRSLEIKAKDVKSQEEWLVHINFTQPKQVPEILFPRHSVVV
KGDGSVNRVKRDWVIPPVNVLENSRKQFPEELVKIQSDKDKSNTLRYSVTGPGADQNPTG
LFIIDPITGILSVTKPLDREHIPNFHLRAHAVDINGNQMENPIDIIINVIDMNDNRPEFT
HQIWNGTVDEGAKPGTFVMTVTSQDKDDPNTANGMLRYKILSQTPESPSSNMFTINNKTG
KIITVAAGLDREKVPQYTLIIQATDMEGNPTYGLSNTATAVIRLLDVNDNAPEFTRETFH
GEVPENRVNVIVTNLTVTDKDEPGTTAWNAVYRIISGDPTGRFSIPTDPVTNEGLVTVVK
PIDFEMNRSFMLTVVAENEVPLASGIHRTRQSTSTVSIRVIDVNESPNFDPNPKQVKLEE
GLPQWSMLATFTAHDPDRYMQQTIRYSKLFDPANWLEIDPNNGRISTIAVLDRESPYVKN
NLYNATFMAADNGVPPASGTGTLQIYLLDINDNAPRVFPQETEVCERPEPNAINITAVDG
DLNPNAGPYAFELPNRPSDIRRNWTLTRISGDHAQLSLKISYLESGIYELPISITDSGNL
PMSNITYLRIKVCQCDHHGDCVDMERIMAAGLGTGAIIAILICIIILLVLVLMFVMWMKR
RDKERQAKQLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPDTLEPDMIKPVGIRR
LDERPMHSEPNYPIRSAAPHPGDIGEFIHEGLKAADTDPTAPPYDSLLVFDYEGSGSTAG
SLSSLHSSSSGGDQDYDYLNDWGPRFRKLADMYGGNDD
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggtgacagccagagacagagcgggcaactatatctgggagaccactgttaaactggcc
ctcgctggacacctgctatcacctcccgttaaccagtttgctggggatggtatttatggc
ggatcctcccacaaccactatcaaaatcccagactcattacgtttccacgacaacaccag
cgaggctcgtccaatggactgcggcgacagaagcgagactgggtcattccaccaatcaac
gtgcctgaaaactccagaggacccttccctcaagttctcgtcaggtttgcagtggatttc
gtggactgtggccgaggttccggcttgcgtttcgagagcggcgacccagcagatttccgg
atagaggccgacgggacggttttcgcggcgcggaccctgcagctctctgacaggaagggg
cggagcttggagattaaggccaaggacgtgaagtctcaagaggaatggctggtgcacatc
aacttcacccaacccaagcaggtgccagagatactgtttccgaggcacagtgtggttgtc
aagggcgacggcagtgtgaatcgcgtgaaaagagactgggtcattcctcctgtcaacgtg
ctcgagaactccagaaaacaattccccgaagagcttgtgaaaattcagtcagataaggac
aagagtaacacactgcgctatagtgtgactggaccaggagcagaccagaatcccaccggt
ctgtttatcatcgaccccattacaggaatcctgtccgtcaccaaaccgctggacagagaa
cacatcccaaatttccatctacgtgctcatgctgtagacatcaatgggaatcagatggag
aaccccatcgacatcatcatcaatgtcatcgatatgaacgacaaccggcccgagttcact
caccagatctggaacggaaccgtggatgagggcgccaaaccaggtacatttgtaatgaca
gtgacctctcaggataaggatgacccaaatacagccaacgggatgctcagatacaagatc
ctctcgcagaccccagagagcccctcctccaacatgttcactatcaacaacaagaccggc
aaaatcatcactgtagctgcaggtctagatcgtgagaaggtgcctcagtacaccctgatc
attcaggctaccgacatggagggaaaccccacctatggtctgtccaacaccgccactgct
gtcatacgcctgctggatgtcaatgacaacgctccagagttcacccgagagaccttccat
ggtgaggtcccagagaaccgtgtgaatgtgatagtgacgaatctcaccgtgactgacaaa
gatgaaccggggaccactgcctggaatgcagtgtaccgtatcatatccggggacccaacc
ggacgcttctccatccctaccgatcccgttaccaacgaaggcctcgtcaccgtcgtcaag
ccaattgattttgagatgaatcgatcattcatgctgacggtcgttgctgaaaatgaggtg
ccactggcgagtgggatccatcgcacccgccagtctacatccaccgtgtctatacgtgtc
atcgacgtgaacgaaagcccaaattttgaccccaaccccaaacaggtcaaactggaggag
gggcttccgcagtggtcgatgctggcgacttttacagcgcatgatccagacagatatatg
caacagactattaggtactctaaactatttgaccccgccaactggctagagatcgatccc
aacaacggacgaatttccactattgctgtcctggacagagagtctccatatgtcaaaaac
aacctctacaacgccacattcatggccgctgataacggtgtccctcctgcgagtgggacg
gggactctgcagatctacctgctggacataaacgataacgcacctcgagttttccctcaa
gaaacagaagtgtgcgagaggcccgaacccaatgccatcaatatcacagccgtagacgga
gatctcaaccccaacgctgggccctacgctttcgagctgcccaaccgtccctctgacatc
cgcaggaactggacactgacacgaatcagcggcgaccacgctcagttaagtctaaagatt
agttacctggaaagtgggatatacgagctgcccatcagcatcacagactcgggtaacctg
cccatgtccaacatcacctacctgcgcatcaaagtgtgccagtgcgatcaccacggcgac
tgcgtggacatggaacgcatcatggcagccgggctgggcaccggagccatcatcgccata
cttatctgcatcatcattctgctggtgctggtgttgatgtttgtgatgtggatgaagaga
cgggataaagagagacaggccaagcagctgctgatcgatccagaggacgatgtgcgagac
aacatactcaaatacgacgaggagggtggcggagaggaagaccaggactatgatctgagc
cagctgcagcagcccgatactctggagccagacatgatcaagcccgtcgggatccgccgg
ctggacgagcgaccgatgcactccgagcccaactatcccatccgttcggccgcaccccat
cccggagacataggagagtttatccacgagggtctcaaggcggccgacaccgatcccacg
gcccctccgtacgactccctgctggtgttcgactacgagggcagcggctccacggccgga
tcgctcagctcccttcactcgtccagcagcggaggcgaccaggactatgactacctcaac
gactggggccctcgcttccgcaaactcgccgacatgtacggaggcaacgacgactag
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