Puntigrus tetrazona (Sumatra barb): 122325505
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Entry
122325505 CDS
T08985
Symbol
abcf2a
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family F member 2a
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptet03009
]
122325505 (abcf2a)
Ribosome biogenesis [BR:
ptet03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
122325505 (abcf2a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_15
MMR_HSR1
AAA_28
AAA_22
RsgA_GTPase
AAA_24
AAA_16
AAA_33
VapE-like_dom
NACHT
AAA_30
Dynamin_N
AAA_23
Motif
Other DBs
NCBI-GeneID:
122325505
NCBI-ProteinID:
XP_043076481
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Position
2:complement(15127984..15133761)
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AA seq
613 aa
AA seq
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MPSDLAKKKAAKKKEAAKARQRTKKPEDGVNGDAEKPENQQNGAAEFNGVASLTKELDEF
ELKKTEARAVTGVLASHPNSTDVHISSLSLTFHGQELLSDTSLELNSGRRYGLIGLNGTG
KSMLLSAIGHREVPIPEHIDIYHLTREMAPSEKTALECVMEVDEERIKLEREAERLAHED
SECEKLMELYERLEELDADKAEMRASRILNGLGFTTAMQQKKLKDFSGGWRMRVALARAL
FLKPFMLLLDEPTNHLDLDACVWLEEELSQFKRILVLISHSQDFLNGVCTNIIHLHQRKL
KYYTGNYDQYVKTREELEENQMKRFNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTL
QKMVASGLTERVVNDKTLSFYFPPCGKIPPPVIMVQNVSFRYSENTPHIYKNLEFGIDLD
TRVALVGPNGAGKSTLLKLLTGELLPTDGMIRKHSHVKIGRYHQHLTEQLELDLSPLEYM
MKCYPEIKEKEEMRKIIGRYGLTGKQQVSPIRNLSDGQKCRVCFAWLAWQNPHMLFLDEP
TNHLDIETIDALAEAINEFEGGMMLVSHDFRLIQQVAQEIWVCEKQTITKWSRDILAYKE
HLKSKIDKQMHDL
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgccatctgatttagcaaagaagaaggcagcgaaaaagaaagaagcagccaaagctcgt
caacgtacaaagaaaccagaggatggagtgaatggtgatgcagagaaacccgagaaccag
cagaatggagcagctgagttcaacggggttgccagtttgactaaggagctggatgagttt
gaactgaagaaaaccgaggcccgagcagtaactggtgtgctggcgtctcatcccaacagc
actgatgtgcacatcagcagcttgtctcttacctttcacggacaggagctgctcagcgac
actagtttggagctcaattctggccgtcggtatggtcttattggactcaatggaactggc
aaatccatgctgctgtcagcgattggtcacagggaggtgcccattccagagcacattgat
atttaccacctgacccgtgagatggctcccagtgagaagaccgctttggagtgtgtgatg
gaggtagatgaagagaggatcaagctggagagagaggctgaaaggctcgcacacgaggac
tctgaatgcgagaagctgatggagctgtatgagcgtttggaggagctggatgctgataaa
gctgagatgagggcctcgcgtatccttaacggtctgggcttcactactgctatgcagcag
aagaaactcaaagacttcagtggtggctggaggatgcgtgttgctcttgctcgggcactg
tttctcaagcctttcatgttgctgttggatgagccaacaaaccaccttgacttggatgca
tgtgtgtggctggaggaggagctcagccagttcaaaagaattctggttttaatatcccat
tctcaggacttccttaatggcgtttgtaccaacatcattcacctgcaccagcgcaagctg
aaatattacacgggtaactacgaccagtatgtaaagacccgagaggaactggaggagaat
cagatgaagcggtttaactgggagcaggaccagatagcacacatgaagaactacattgct
cggtttggtcacggttctgccaagctggccagacaagctcagagcaaagagaagactctt
cagaagatggttgcctcaggtcttactgagcgtgttgtgaatgacaagaccctgtcattt
tattttcctccctgtgggaagatccctcctcctgtcattatggttcagaatgtcagcttc
aggtattcggaaaatacgccacatatttataagaacctggagtttggaattgacttggac
acacgagtggcccttgtagggcccaatggagcaggaaagtctactttgctgaagctcctc
actggagagctcctgcccacagatggtatgattagaaaacactcccatgtgaagattgga
cgatatcatcagcatctgacagagcaactggagcttgacctttcacctttggaatacatg
atgaagtgttaccctgagatcaaggagaaagaagaaatgaggaaaatcattggacgctat
ggactcactggcaaacagcaggtgagccctattaggaatctgtccgatgggcagaagtgc
cgtgtctgctttgcctggctggcctggcagaatccccacatgctctttcttgatgagccg
accaatcaccttgacattgaaactattgacgctctggctgaggctattaatgaatttgag
ggtggaatgatgctggtcagccacgacttcaggcttattcagcaggtggctcaggagatc
tgggtttgtgaaaagcagaccatcacaaaatggagcagggacattctggcctacaaggaa
catctaaaatcaaaaatcgacaaacagatgcatgatttatag
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