Puntigrus tetrazona (Sumatra barb): 122325560
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Entry
122325560 CDS
T08985
Symbol
afdna
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04517
IgSF CAM signaling
ptet04520
Adherens junction
ptet04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122325560 (afdna)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
122325560 (afdna)
04530 Tight junction
122325560 (afdna)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
RA_2
PDZ_6
PDZ_2
RASSF8-10_RA
RA_3
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
122325560
NCBI-ProteinID:
XP_043076544
LinkDB
All DBs
Position
20:complement(22917664..23019738)
Genome browser
AA seq
1938 aa
AA seq
DB search
MSGSREEERRKLADIINHWNANRLDLFEISQPTEDLEFHGVMRFYFQDRVAGNFATKCIR
VSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERKLDLDEKPLVVQLNWNKD
DREGRFVLKNENDIIPKRTLSNGPEKEKEGVIQNFKRTLSKKEKKKEKKREKEAFSRIPD
GDDHTLNREDGENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRSGDG
RPDSGGTLRIYADSLKPNIPYKTILLSTTDMADFAVAEALEKYGLEKENPRDYCIAQVIH
ANDKPVKETILDDTDCPLQILRDWTSDKEALVFQLKKRPPDYVSRKGRKPDNRMLPHGSI
PPEKLPYLVELSPGRGSHYAYYYRHHEDGSDSRDKPKLYRLQHSVTEVGSDRSEDGNIQL
FGPGILPHHCDLMHADGLVTVTPVSLDAETFVDGQRISDTTVLRSGVTVQFGATHVFKFV
DPSYDHSMSKRDPGPMMKARHKSGSVPETTFDLHGDIHSGSALPTSKSSGKLEMERSGNS
ERGLVKPMIRGEQQDFNKHDGRSQDGPELTLPASIEFRENSEDAFLSAIINYTNSSTVHF
KLSPTYVLYMTCRYVMSSQYRPDISPSERTHKVIAIVNKMVSMMEGVIQEIAEGDQKQKN
IAGALAFWMANASELLNFIKQDKDLSRITLDAQDVLAHLVQMAFKYLVHCLQSDLNNYMP
AFLEDPDEQNPQRPKIEDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNKLV
TEADSGLCSHYWGAILRQQLSHIEAWAEKQGLELAADCHLSRIVQATTLLTMDKYSMQDV
QNINNTCFKLNSLQLNALLSNYHCAPDEPYIPPELIDHVVAVAENTADELARSDGREVQL
EEDPDLQLPFLLPEDGYSCDVVRNIPNGFQEFLEPLCQRGFCRLTPHPRSPGTWTIYFEG
ADCDSHFSADTSELPMRKEPEIVTVTLKKHNGMGLSIVAAKGAGQDKLGIYIKSVVKGGA
ADMDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTGSVVTLEVAKQGAIYHGLATLLNQ
PSPMMTRASDRGRVDKGKMRPKSEGFELYNNSVQNGSPESPQGTWDTYPEPKKEDRLLKN
RADHRSSPNVANQAQSPGGKPVYPGAPGKITSVSTGNLCPDEEPSPPRPEAYPIPTQTYP
REYFTFPASKSQDRMGPGQPWQNNEQEPLPPMDNHSNNSMAMQRVARSQEELCEMPGGYP
GERLRQEDLMHLQQQQRDAEYRGGGEHWNHQISSSVESSTSSQEHLNYSSSSGSRIQGNH
KSGPGRWKTPIVPHSGPVSVSQPSRSDLPPPPPPPPAHYDYEPQTDLPLPPPPSITQQAA
AAAATADRKKREEQQRWYEKEKARLEEERERKRRDQERKLVQIRNPPGPVMHNNQHGPLP
PAPQHQQMPHPQPPMQVPQPYLPPVQQPQPPQPQPARPDKLSSLPRQPPQDTVIRDLLPQ
QQPRTIERRDLQYITISKEELSASDSLSPDPWKRDAREKLEKQQQLHIVDLLDKEIQELQ
AKPERTAEENDRLRKLMLEWQFQKRLQESKQNEEDEEEEDDEDVDTTLIMQRLEAEKRAR
QTAVPAISVLDLLQDEERRRKQQLEEIRKREAEERAKQEEERRWREEERARREAEEKRRQ
EEEYYTRLEAERRRQHEEAERKLLTPDEPGLYRPPLPRDYQPPSPASTPATNNNSAPPPP
PQRNTSYLKTQVASPDTIYTAKFVSYNDEEEEEEDEEDAGLTGQVKLSATRKSYGDLPPA
PKPQPPPTARKPRPVSDGIFLSNSFQLPAAANANSTVPKAGQAPLPPAKPSFMSSANSKG
FNSYTGNTTGLGSGEIYKDPREKWTKGSPDQENTIGGAPENLTFKERQRLFSQGKEVSNK
VKASRKLMELENELNIKQ
NT seq
5817 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggagccgagaggaggagcggcggaaactcgccgacatcatcaaccactggaac
gccaaccggctcgacctgttcgagatcagccaaccgaccgaggacttggagttccatggc
gttatgcgcttttacttccaggatcgagtggcggggaacttcgccacgaagtgcatccga
gtgtccagcacggcgaccacgcaggatgtgatcgagacgctggcggaaaagttcagaccg
gatatgaggatgctgtcttctcccaaatactccctctatgaggtccacgtcagtggcgaa
gagaggaaactggacttggacgagaaaccactggtcgtacagctgaactggaacaaagac
gacagagagggccgcttcgtcctcaagaacgagaacgacatcattcccaagagaacactg
tcaaatggcccagagaaagagaaggagggggtgatccagaacttcaaaagaacactgtcc
aaaaaggagaagaagaaagagaagaagagggagaaggaggccttttccagaataccagat
ggagatgatcacacactgaaccgcgaggatggggagaactccagattggcggctgaagta
tataaagacatgccggagaccagtttcacgaggaccatttcaaaccccgaggtggtgatg
aagaggagaagacagcagaagctggagaagagaatgcaagagtttcgcagcggagacggt
cgaccagactcaggagggactctgaggatctacgccgatagtctgaagccaaacattcct
tacaagaccatcctgctctcaactactgatatggctgactttgctgtggccgaggctctg
gagaaatatgggctggagaaggaaaatcccagagattactgcatcgcccaggtgattcat
gcaaatgataaaccagtgaaggagaccatactagacgacacagattgccctctgcaaatc
ctcagagactggacaagcgataaagaggccttagtattccagctgaaaaagcgccctccg
gactacgtttcaaggaaaggacgtaaacctgacaacaggatgctgccacacggatccatt
cctcccgagaagctaccctaccttgttgaactgagcccagggcgagggagtcactatgcc
tactactaccgccatcatgaagatgggtcagactcccgggataaacccaaactttaccga
ctacagcacagcgtgactgaggtcggatctgaccggagtgaagatggtaacatccagctg
tttgggcctgggattctgcctcaccactgtgacctgatgcatgcggacgggctggtgacc
gtgacccctgtcagtttggacgccgagacgttcgtggatggacagaggatctccgacact
acggttctgcgcagcggcgtgacggtccagttcggagccactcacgtcttcaaattcgta
gaccccagctatgaccacagcatgtccaaaagagacccagggcccatgatgaaggccagg
cacaaatcgggaagtgtcccggagacgacctttgaccttcacggagacatccacagcggc
tccgctctccctaccagcaagagctcagggaagctggagatggagcgctctggaaacagt
gaaagaggcctggtgaaacccatgattagaggagaacagcaggactttaacaaacatgac
ggaaggtcccaggatggcccagaactcactctgccggccagcatcgagttcagggaaaac
tccgaggatgccttcctgtccgccatcattaactacaccaacagctcaacagtgcacttc
aagctgtctcccacctatgtgctgtacatgacctgccgctacgtcatgtccagccagtac
cggcccgacatcagcccctccgagcgaacgcacaaggtcattgccattgtcaacaagatg
gtgagcatgatggaaggagttatccaggagattgctgaaggtgatcagaaacagaagaac
atcgccggggctctggccttttggatggctaacgcttcagagctgctgaacttcatcaag
caggacaaggatctgagtcgcatcacgctagatgcccaggatgtcctcgctcacctggtt
cagatggcttttaaatacctggtgcactgcctgcagtcggatctgaataactacatgccg
gctttcctggaagatcctgatgaacagaacccacagaggcccaaaatagaggacgttctg
cacacgctaacgggcgccatgtctcttctgcggcggtgccgcgtcaatgcggcccttaca
attcagcttttttcgcaactcttccattttatcaacatgtggctctttaacaagctggtg
acggaggccgactcgggcctgtgctcgcactactggggcgccatcctgcgacagcagctc
agccacatcgaggcttgggctgagaagcagggtttggagctggccgcagactgccatctc
agtcgcatagtccaggcaacgactcttctcaccatggacaaatactccatgcaagatgtg
caaaacatcaacaacacctgtttcaagctcaactctctgcaactcaacgctctgctgagc
aactaccactgtgctcctgatgaaccctacattcctcctgagctaattgatcacgtggtg
gctgtggctgagaacacggcggacgaactggcccgaagcgatgggcgggaagtacagctc
gaagaggaccctgacctccagctgcctttcttactgcccgaggatggctactcatgcgac
gtggtgcggaacattcccaatggattccaagagttcctagagccgctttgccagagaggt
ttctgtcgattgacacctcatccacgctctccgggaacttggaccatctattttgaagga
gctgattgcgacagtcacttctcagctgacacgtcagaactgccaatgcggaaggaaccg
gaaattgtgacagtaactttgaagaaacacaatgggatgggtctcagtattgtggcggcc
aagggtgccggacaggacaaacttggtatttacatcaagtctgttgtcaaaggaggtgca
gcagacatggatggacgtctggctgccggagaccagttgctcagcgtggatggaagaagt
ttggttggcctctcgcaggagagggcggcagaattgatgacacgaactggctctgttgtg
acactcgaggtggccaaacagggagccatttaccacggtctggccacgctcctcaaccag
ccgtcccctatgatgacccgtgcatctgaccgtgggcgtgtagacaagggaaagatgaga
ccaaagagcgagggctttgagctctacaacaactctgtgcagaacggctcgcctgagagc
ccccagggcacgtgggacacctatcctgaaccaaagaaggaggacaggttgttgaagaac
cgtgcagaccaccgctcaagcccaaatgtggccaaccaggcccagagtcctggcgggaag
cctgtttacccaggagcccctggaaagatcacttcggtctcgacgggtaacctctgccct
gatgaggagccctctccaccccgtccagaggcgtatcctatccccactcagacgtaccca
agggaatacttcaccttcccagcctccaaatctcaggataggatgggccctggccagccg
tggcaaaacaatgaacaagagcctctccctcctatggataaccactctaacaacagcatg
gctatgcagcgtgtggcgcgctctcaggaggagctgtgtgagatgccgggtgggtaccca
ggtgaacgcctgcgtcaggaagacctgatgcacctgcagcagcagcagcgtgacgcagag
taccggggcggtggggagcactggaaccaccagatatcctcctcagtggagtccagcacc
tccagccaggagcacctcaactactcatcgtcttccggctccaggatccaaggcaaccac
aagagtggccctgggcgctggaagacccctatagtaccgcactccggccccgtgagcgtc
tcccagccttcacgttcagatcttccacctccccctcctcctcctcctgcgcactacgac
tacgagccacaaaccgacctgccgcttcctccaccgccctctattacgcagcaggcagcg
gccgccgcagccacggctgaccgcaaaaaacgcgaggagcaacagcgctggtacgagaag
gaaaaagccaggctcgaagaggagcgagagaggaagagaagagaccaggagaggaagctg
gtgcagatacgcaaccctcccggcccagtcatgcacaacaaccagcacggcccattgccg
cccgcccctcagcaccaacagatgccccatccacagccgcccatgcaggtaccccaaccg
tacctacccccggtccagcagccccaaccgccacagccacaaccggctcgacccgacaaa
ctatccagccttccccgccagccgccacaggacacggtaatccgtgacctcttgccccag
cagcagcctcgcaccatcgaaagacgtgacctgcaatacatcaccatcagcaaagaggag
ctgtccgccagcgacagcctctcacccgacccctggaagagggacgcccgagagaaactg
gagaagcagcagcagcttcacatcgtggacctcctagacaaggagatccaggagcttcag
gccaagcctgaacgcacggccgaggagaacgaccgtctgcgcaaactcatgctggagtgg
cagttccagaagagactgcaggagtccaagcagaacgaggaggatgaggaggaggaggat
gacgaagacgtagacaccacgctaattatgcagaggctggaggctgagaagagagcacgg
cagactgctgttccagcaatctctgtactagacttgctgcaggacgaggagcgacgacgg
aaacagcagttggaggaaatccgtaagcgtgaggcagaagagcgagccaaacaggaggag
gagagacgctggagagaggaggagagagccagacgagaggccgaggagaagaggagacag
gaggaagagtactacacccgcctggaggcagagcggcgccggcagcacgaggaagccgag
cgcaagctgctgacgccagacgagcccggtctgtacagaccccccctaccccgggactac
cagcccccttctcccgcaagcacccccgccactaacaacaacagcgcccctccgcccccg
cctcagagaaacacctcctacctcaaaacccaggtcgcctcccccgacaccatatacact
gccaagtttgtctcgtacaatgacgaggaggaggaggaggaggatgaggaggacgcgggc
ctaacaggtcaggttaagctctcggccacccggaagtcctacggtgaccttccgcccgcc
ccaaagccccagccgccgccaaccgcgcgcaagccccgtcccgtctcagatggcatcttt
ctgtccaactcattccagctgcccgcagcggccaatgccaacagtactgttcccaaggca
gggcaggcccctctccctcccgccaaacccagcttcatgtcatcggccaactctaaagga
tttaattcatacactggaaacacaacaggactaggatcaggagagatttacaaggacccg
cgagagaagtggacaaaaggcagccccgaccaggagaacacaataggaggagctccagaa
aacctgacgtttaaggagcgccagagactcttctcgcagggaaaggaagtgtcaaataaa
gtcaaagcgtcccggaagctcatggaactggagaacgaactgaacataaagcagtag
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