Puntigrus tetrazona (Sumatra barb): 122326001
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Entry
122326001 CDS
T08985
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptet04040
]
122326001
Ion channels [BR:
ptet04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122326001
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XRCC1_N
Ion_trans
TRP_2
PKD_channel
Ank_2
zf-C2HC_2
Zn-C2H2_12
Motif
Other DBs
NCBI-GeneID:
122326001
NCBI-ProteinID:
XP_043076610
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All DBs
Position
21:10969176..10981949
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AA seq
1425 aa
AA seq
DB search
MAPIKIKHIVSFTSQDSKNGVNNLCEDGNSSRPWLCSVQDRSGVLRVELQMERASAIGFI
DVGNCGSAFIQVDVGRSSWSSDHPYVTLLPTATLMSPVDSKQGTGRQNVRMFKKADFLLQ
AAEESWDRLRVTCTQPFDKRSQFGLSFLRVRTTEDEAEDSSVQHDDISAENLSTPEKMTS
VMEWLSSPAIQSTFFGQITGDVSSDRQRNAGSLSRAERMVKAAHSNRRSSSTSPSSSTSS
TTPPREDNVKSPTGGFRTSSERPLKAPRVQRKKSKARQSLINSGAPQKRSRPTASTHEPN
SISPHSSVHQAPQGSPETRCPLCGESFSPDYLPFHASTCLESDSAELMGVRETEVMSSQY
SSVFGSGADEHMVPCPLCSFRFPPDRIQRHASTCGDAVEPGTVWLNPEQWREIVNKKFRF
PPELLGAIREGNVNMVSSLLKTGDGIIRQLDDSEDRLWREALNLSIRLGNEDTMDTLLQG
VKFDFRQIHESLLVAVDTNQPRVVKRLLDRLDLEKGNKMDVRSFSMAIFDHSIDDSQFAP
GVTPLTLACQKDLYDIVTMLNQKGHEIPWPHKISCTCLECRNGRQYDLLKFSLSRINTYR
GIASRAYLSITAEDAMLSAFRLSRDLRKLSKKEPEFKPQYISLEELCQEFAVELLGMCRN
QSEVTTILNSLGDQDEDSEDELEQQTFEEGIPNLARLRLAVNYNQKQFVAHPICQQVLSS
IWCGNLSGWRGSRTAWKLLVSFGIFLTMPILCLIYWIAPKSKLGKTLRIPVIKFLLHSAS
YMWFLITLLGESIAMEVYRDSFASRQQTILHNSFHMVWVVGFFWFECKEIWIEGLRSYFL
DWWNCLDVMVLSMYLASFALRVVIMLKVHFLCQLPDKQEECVYFTETLREEWHQEDPQFI
AEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFMFILVIIGTAFLCGVNN
VYVPYMISPNLGRLNETFSFLFWTMFGMADQTYVDMPEFVLAEFVGRILYGIYTLIIVIV
LLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPVPFNIIPSPKAVFYLLR
GICRRICCCCFNCNSAPDYPPLASMKNDGSPGESRISYRQQVIRALVQRYIESARREFEE
AKRKDVGNRITELSKVIGTLHTEMKHIQTDLFGQSDNPTGDPSGGSSFLGKYILGAKNNF
RGFSNERKTVPLHEPILHEEPAEESVEEDEESPAADTEPEPESIDEQKNDNAVEDVNETE
EGEDEGDEQTGNDDLTEMSMEGDGEKNTESTSETVIDIESTTDTESEAGGKTEDEMIAEE
ASDNVEDYATGGEDLDETETEENSNETTDETNEDVVEVIEENAGEGIKIDLNQTNLVSFL
AKRIEEKLEKNFTLIGNKASSPTGSADSQDTGFGSQEFDLSTSGP
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atggctcccatcaaaataaaacacatcgtctcgtttacatcacaggatagtaagaatggt
gtgaataatctgtgtgaagacggtaacagcagcagaccgtggttgtgcagcgtccaggac
cgcagtggagtcctcagggtggagctacagatggagcgagcatctgctataggattcatt
gatgttggcaactgtggctctgcattcatccaggttgatgtcggccgctcctcgtggtca
tcagaccatccatatgtcaccctactgcccactgcaacactcatgagtccagtggactcg
aaacagggcactggccgccaaaatgtgcgcatgtttaaaaaagctgattttctccttcag
gctgctgaggagagctgggacaggctgcgagtcacctgcacgcagcctttcgacaaacgc
tcacagtttggtctgtcttttctgcgcgtccgcaccacggaagacgaggctgaagattcc
tcagtgcaacatgacgatatttctgccgaaaatctgagcacaccagaaaagatgacatcc
gtgatggagtggctttccagtccggctatccaaagcacattttttggacaaatcacgggg
gatgtctcctcagatcggcaaagaaatgctgggagtttgagtcgggcagagcggatggtc
aaagccgcccactctaacagacgctcttcgtcaacatcccccagcagttctacatccagc
acaacacctccgagagaagataacgtcaaatccccaacaggtggatttaggacttccagc
gaaaggccactaaaggcccctcgtgtgcaaaggaagaagtctaaggcacggcagagcctt
ataaacagtggtgctccacagaagagatccagacctacagcatccacccatgaacccaac
tcaataagcccacacagtagtgtccaccaggcccctcagggctctcctgagacgagatgt
cctctttgtggagaatccttcagtcccgattatctacctttccatgcctccacctgcctg
gagtctgattcagcggagctcatgggagtcagggaaacagaggtcatgagctcacagtac
tcttctgtttttggctctggcgcagatgagcatatggttccatgtcctctttgctccttc
cgattccctccagaccgtattcagcggcacgccagcacctgtggcgacgcggtagaacca
ggtactgtgtggttgaacccagaacaatggcgcgagattgtgaacaagaagtttcgcttc
cctccggagctcctcggcgccatccgagagggcaacgtgaacatggtctcttcgctcctg
aagacgggtgacggcatcatccgccagctggacgactctgaggacaggctatggagagaa
gcgctgaacttgtccatccgactggggaatgaagacaccatggacacccttctccaaggg
gtcaagtttgacttccggcagattcacgaatctcttctggtggccgtggacaccaaccag
cctcgtgtggtcaagcgcctcctggaccgcctcgatctagagaagggaaataagatggat
gttcgctctttctcaatggccatttttgaccattccattgatgattcccagtttgctcct
ggagtgacacctttgacactggcctgtcagaaggatctgtatgacattgtgacaatgctc
aatcagaaagggcacgaaattccttggccgcataaaatctcctgcacctgtctggagtgc
aggaatgggcggcagtatgatttgctcaagttctcgttgtctcgtatcaacacctaccgg
ggaattgcaagcagggcttatctatccatcaccgcagaagatgccatgctcagtgccttt
cgactcagccgggatctacgcaagctgtctaaaaaggaacctgagtttaagcctcagtat
atttccctggaggaactgtgccaggagtttgccgtggagctgctcggaatgtgccggaac
caaagtgaggtcaccaccatcctgaacagcctcggggatcaggatgaggacagcgaggac
gagctggaacagcagacgtttgaggagggcattccaaacctggctcgcttaaggcttgct
gtcaactataatcaaaaacagtttgtagcccaccccatctgccagcaagtgctctcctcc
atctggtgtggaaacctttcaggctggaggggcagtagaacagcctggaagctcctggtg
tcttttgggatcttcctgaccatgccgatcctttgcctcatctactggatcgcaccaaag
tcaaagctggggaagactctgaggatcccagtgattaaattcctcctccattcggcttca
tacatgtggttcctgatcacgcttctgggggaatccattgccatggaggtgtatcgagac
agctttgcctctcgtcagcagaccatcctgcacaactccttccacatggtctgggtggtt
ggttttttctggtttgagtgtaaagagatctggatcgagggcttgaggagttatttccta
gactggtggaactgtctggatgtgatggttcttagcatgtacctggcttccttcgccttg
agagtagtcatcatgctgaaggtccacttcctctgccagttacctgacaaacaggaggag
tgcgtctacttcaccgagactttgcgtgaagagtggcatcaggaggatccccagttcatc
gctgaggtgctgtttgcggtaaccagcatgctgagtttcactcgcctggcttacatccta
ccagcacacgagtctcttggtaccctgcagatctccatcggaaagatgattgacgacatg
atgagatttatgttcattttggtgatcattggaaccgccttcctgtgtggcgtcaacaat
gtctatgtcccatacatgatttctcctaatcttggaaggttaaatgaaaccttcagcttt
ctcttctggaccatgtttggtatggccgaccagacctacgtggacatgcctgagtttgtt
ttggctgagtttgttggccgaatcctttatggcatctacactctcatcattgtcattgtt
cttctaaacatgcttattgctatgatcaccaactcttttcagaagattgaggatgatgct
gatgtagagtggaaatttgcccgttctaagctctacttgagttacttcagagaaggactg
actatgcctgtcccattcaacatcatcccctctccaaaggccgttttctatctgttaaga
ggaatttgcagacggatctgctgctgctgcttcaactgtaactctgctccagactaccct
cctcttgcatctatgaagaatgatgggagtccaggggagagccgcatttcatacagacag
caggtaatccgtgctctggttcagcgctacatcgaatctgccaggagagagtttgaagag
gcaaaacgcaaagatgttgggaacaggatcacagagctgagcaaagtgattggcacgctg
cacactgagatgaaacacattcaaacagatctgtttggccagtcagacaaccctacagga
gacccgtcaggcggatcttctttcctggggaagtacatccttggagccaaaaacaacttc
aggggcttcagcaatgagagaaaaactgttccattacatgagcctatactccatgaagaa
ccagcagaagagagcgtagaagaagatgaagagtcaccggccgctgacacagagccagag
ccagagtcaatcgacgagcaaaaaaacgataacgctgtggaagacgtgaatgagacggag
gagggagaagatgaaggggacgagcagacaggaaatgatgatctcactgagatgagtatg
gagggagacggtgaaaagaatacagagagtacaagcgagacagtcatagatatagagtcc
actacagatactgaaagtgaagctggtggaaaaacagaagatgagatgatagcagaggaa
gccagtgataacgtggaggattacgccacaggaggagaggatctcgatgaaacagaaact
gaggaaaacagtaatgaaacaacagatgaaacaaatgaggatgtagttgaagtcatcgag
gaaaatgcaggtgagggaatcaagatcgacctgaatcagacaaacctagtgagtttctta
gcaaagaggatagaggaaaagctagagaagaatttcactttaattggaaacaaagcatca
tctccaaccggcagcgctgactctcaagacaccggttttggttctcaagaatttgatctc
tcgactagcggcccttaa
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