Puntigrus tetrazona (Sumatra barb): 122326241
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Entry
122326241 CDS
T08985
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122326241 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122326241 (nup98)
03036 Chromosome and associated proteins [BR:
ptet03036
]
122326241 (nup98)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122326241 (nup98)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122326241 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
122326241
NCBI-ProteinID:
XP_043076905
LinkDB
All DBs
Position
21:12313638..12327805
Genome browser
AA seq
1810 aa
AA seq
DB search
MFNKSFGAPFGGGTGGFGTTSTFGQQNTGFGATGGFGSSAFGTTNNTGGLFGTTQNKPGG
LFGSSTFSQPVTSSTSSGFGFGATSGTSNSLFGSTNTGGGGLFSQQNNAFGANKPATFGT
FGTSTSSGGLFGTTNTTSNPFGGTSGSLFGSSSFTAAPPGTTIKFNPPTGSDTMVKGGVT
TSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPSNPMAAGTGGLFGAAAAATPSTGT
GLFGSSTPNTGFSFGQNKTSFGTSTGAFGTTTGSLFGQSQQQQQQQQQQQQQQQQGSSLF
KPFGSATTTQNNTFSFGNSNSMGLFGNTAASQAGGLFGNTNTSTATGFGTGIFGQTNTGF
GNVGTQNLFGNKPAGFGATTTSAPSFGTGTGLFANKPTLTLGTNTNTSTFGFGATGTGGG
LFGNKTATTGLGTGLGTAFGGAVGTGQTSLFGNNQNKLGSTLGSVGTFGTGGFNTGANTL
NFGAPQQPVALTDPNASAAQQAVLQQQINALAYSPFGDSPLFRNPLSDPKKKEERLKPTN
PAAQKALTTPTQYKLTPRPATRVRPKALSSSGSSKSQLFDGLDDDEPSLNNGAFMPRKSI
KKLVLKNLNNSSLYNSSVNREADDLASPSEYPQNGLSLSIDEGETREVTVERSGEDDLEV
SKFYTNPITKPIPHAQPSPLLQDTISEFNMRGSASHRNGLEASSEDISLAEDSIQEERDE
ELEAQKPPHPAGIVLGRVGYYTIPSMEELGRMLNENGECIVENFTVGRKGYGSVFFSGEV
NLTNMNLDEIVHFRRKEIIVYPDDKDKPPVGEGLNRRAEVTLDGVWPNDKTTCSQIKSPE
RLTEMNYEGRLEAASRKQGARFLEYRPETGSWVFEVAHFSKYGLQESDEEEEVPPAKLDL
KKLKTGVPPGIPQLPLTQQQMAPQAQSTAVLELLSRVSELDSDMADITQEHLADSVLGEE
DGERTLEDKLRSETPAEHEPVSASSQIASSMGINPHTLQIMKASLFAEDDECDLFQEHGS
SKLIQDVASPKALLSGVGRQSIGALLQTKFTSGGGLFSQFPESPFSGIPQKLSKSLASES
PWPSLGPSFLLPALPPEPTLRTVGARRLGGPVPLESSITLGKGRLLMDAALFRGRSFRVG
WGPNWTLVHCGDQLSVTEAMKEHSTEIMGFGFLPKPTKSKPITESPFKVHVEQVVGLEPK
KSVESLALYHRPLEIGLKHSTINTEDYCPFIQPAKGVEALHGYAEWIVEVNKDIGGGDAC
LAHWRQVWTLCAALWGRLGDRDVEIEQCSDYQQQLERRRSFSHWLSECASECIEEEVGRA
LQRSHAEAIFSYLTGHCISKACKLSQKSGDHRLALLLSQAVGSQFCRDLLTLQLSDWNSM
QTDSFIEEERLRIFALLAGKPVWLSTDSCINVCSELDWKRCVAVHLWYMLPPTASVADAL
VKYESAFQGSEEVKRYACPPLPPYVDELELLGLDEEMDETESKKPLYDICFHLLKLYSDR
HYSLQQLLDPNTVTADHLDYRLSWHLWNVLQALNYNHLSTSCQGLLHASYAAQLESAGLW
EMAIFVLLHIPDSGRRESAVREMLNLHCSLEETEESVEKEQFLTEKLLIPIQWIHQAKAI
RACREGDKRSEALHLYKAGHWNHCHRLVIQHLASDCIINDNHKYLLEFLEGLAVPERSVK
IQDWDTSGRVYLDYIHVIQTLQDIQQTESPGYELERLHTEVTSLCSRIERLPCSKAKDRL
AQSEMAKRVANILRVVLSLQQGGEGTPDPRHIPLCQLAPHIGRLPMPEDYALEELRSLTQ
SYLQEYVISH
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaatcttttggtgctccctttgggggagggacaggaggatttgggactact
tcaacatttgggcaacaaaatactggatttggagcaaccgggggctttggatcttcagca
tttgggacaacaaacaacacagggggactgttcgggaccacccagaacaaacctggtggc
ctatttggctcaagcaccttcagtcagcctgtcacatcctccaccagtagtgggtttggg
tttggtgctaccagtggcacatcaaacagcctttttggaagcaccaacactggaggtgga
ggattgttttcccagcagaataatgcctttggtgccaacaaaccagccacttttggcact
tttggtaccagcaccagtagtggtggattattcgggacaaccaacacgacatcaaaccct
tttggaggaacatcaggctctttgtttggatcttcaagtttcactgctgcaccccctggc
actacaatcaaattcaatccaccaactggaagtgacacaatggtaaaaggaggtgtgaca
accagcatcaacaccaaacaccagtgtatcactgccatgaaggaatacgagaacaaatcc
ctagaggaattaaggcttgaggattaccaggcaggaaggaagggtccttcaaaccccatg
gcagctggcacgggaggcctctttggagcagcagccgcagctactcccagtactggcact
ggactctttggttcctcaactccaaacactggcttcagctttggccagaacaagacctca
tttggcacaagcactggggcctttggtacaactacaggaagtttgtttggccagtcacag
cagcagcagcagcaacaacaacaacaacaacagcagcagcagcaaggttccagtctcttc
aaaccatttggctcagctaccaccacccaaaacaacactttctcctttggcaacagtaac
agcatggggctttttggaaatactgctgcctctcaggctggaggattgtttggaaacact
aacacaagtacagccacaggcttcgggacaggaatctttggccaaactaacactggtttt
gggaatgtgggtacacagaatctttttggtaataagcctgctggatttggtgccaccacc
actagcgcaccctcttttggaacaggcactggtctgtttgcaaataagcctacacttact
ctagggactaacacaaacacatcaacctttggatttggtgcaactggtactggtggaggt
ctctttgggaacaaaactgctacgacaggcctgggaacaggactgggaactgcctttgga
ggagctgtaggaactggtcagacatcattatttgggaacaaccagaacaagctgggctca
accctagggtcagtgggcacatttgggactggaggcttcaacactggagcaaacactctg
aattttggtgctcctcaacaacctgtggctctgactgaccccaatgcatcagctgcacag
caggctgtcctccaacagcagatcaatgcactggcctactctccttttggagactcaccc
ctcttcagaaatccactgtcagacccaaagaagaaggaagagcgactgaaacccacaaat
ccagctgcacagaaagccctgactacccctactcagtacaaactgacccctcgtcctgcc
acccgtgttcgtcccaaagctctgtcctcctcaggctcctccaaatctcagctcttcgat
gggcttgatgatgatgaaccctctcttaacaatggagccttcatgcctaggaagagcata
aagaagcttgttttgaagaatctgaataacagcagtctgtataacagctccgtaaacaga
gaggctgatgacttggcctcaccttcagaatacccacaaaacggacttagtctgagtata
gatgaaggagagaccagagaggtaactgtggagagaagtggggaagatgatctggaggtt
tccaagttctacaccaacccaatcaccaaaccaattccacatgcccagcccagccccttg
ctacaggacacaatctcggagttcaacatgcggggaagtgctagtcatcgaaatggcttg
gaggccagcagtgaggacatctctctagcagaggattccattcaggaggagagagatgag
gagctggaggctcagaaacctcctcacccagctggtatagttcttggccgcgtgggctac
tacaccatcccatcaatggaagagctgggaaggatgttgaatgagaatggggagtgcatt
gtggagaacttcacggtcggcaggaaaggctatggatcagttttcttctctggtgaggtg
aatctaactaacatgaacctggatgagattgtccacttcaggcgcaaggagataattgtg
taccctgatgacaaagacaagccacctgttggagagggactaaacagacgcgctgaggtg
actctagatggagtgtggcctaatgacaagacaacgtgctctcagattaagagtccagaa
aggctgactgagatgaactatgagggccggcttgaggcagcctcacgaaaacagggcgct
cgcttcttggaatatcgacctgaaactggctcctgggtttttgaggtggcacacttctca
aagtatggactccaggaatctgatgaagaagaggaagtcccccccgcaaagcttgacctg
aagaagctgaagactggtgttccacctggaatcccacagcttccactgacccagcagcag
atggcaccacaggctcagagtacagcagttcttgagctgctcagccgtgtgtcggagttg
gacagtgacatggctgacattactcaagaacacctggcagacagcgttttgggtgaggag
gatggagaaagaactttggaggacaagctaagatctgagacacctgctgagcacgagcca
gtgtccgcatcaagtcagattgcttcctcaatgggcatcaaccctcataccttacagatc
atgaaggcctctctttttgcagaggatgatgaatgtgacttgtttcaagagcacggttct
tcaaagctcatacaggatgtggcttctcccaaagccttgctttctggagttggtcggcag
tcaattggagcccttttacaaaccaagttcacctcaggaggaggacttttttcccagttt
ccagagtctccatttagtggaatacctcagaagcttagtaagtcactagcatcagaatct
ccatggccatcattgggtccttccttcttgttgccggcccttcccccagaacctactctt
cgaactgtaggggcccgcagactaggagggccagtacctctggaaagctcgatcactcta
ggaaaaggccgtctgctaatggatgctgctttgttcagaggtcgatctttcagagtgggc
tggggtcccaactggacattggtgcactgtggagatcaacttagtgtcacagaggcaatg
aaggagcattcgacagagatcatgggatttggcttcttacccaaacctaccaaaagcaaa
ccgatcactgaaagtccgtttaaagtacatgtggagcaggtggtcggcctggagcccaaa
aagtcagtggagagccttgctctgtatcacagaccactggagattggtctaaagcacagt
acaattaacacagaggactactgtcccttcatccagccagcaaaaggagtggaagcacta
cacggttatgctgagtggattgtggaagtcaacaaagatataggaggaggggatgcttgt
ctggcccattggcgccaggtttggaccttgtgtgctgctctttggggtcgtcttggagac
cgggatgtggagattgagcaatgttcagattatcagcagcagcttgagaggcggaggagc
ttctcacactggctctctgagtgtgcatctgaatgcattgaggaggaggtgggccgagcc
cttcagcgcagccatgctgaggccatatttagttaccttaccggtcactgcataagcaag
gcctgcaaattgtcccagaagagtggggaccatcgccttgctctgttgctgtctcaggct
gttggctctcagttttgtagagatctattgactctgcagctcagtgactggaacagcatg
cagactgactccttcatagaggaggagaggctacgaatttttgctttgcttgctggaaaa
ccagtgtggctgtcaacggatagttgtataaatgtgtgctccgagctcgattggaagcgg
tgtgttgctgtccatctctggtacatgctgcctcccactgcatctgtagctgatgcactc
gtcaaatatgaatctgcatttcagggttcagaggaggtgaagaggtatgcttgccctcct
ttacctccttacgtagatgaactcgagttgttgggtttggatgaagagatggatgagact
gaatccaaaaagccactgtatgacatctgcttccacctgctcaaactttacagtgacagg
cactatagcctacaacagctacttgatcccaacaccgtaactgctgatcacctggattac
cggctgagttggcacctgtggaacgtattgcaggctcttaactacaaccacctgtccacc
tcatgccagggcttgctgcatgccagttatgctgcccagctggagagtgcgggattatgg
gagatggcaatctttgtgctgctgcacatacctgactctgggcgtagagagagtgcggtg
agagagatgctcaacttgcattgctcccttgaggagactgaagagtcagtggagaaagag
caatttctcactgaaaagttgctgatccccattcagtggatccatcaggccaaggccatc
cgtgcatgtagagagggagacaaacgtagcgaggctttgcatctttacaaggccggccat
tggaatcactgccatcggcttgtcatccagcacctggcctcagactgcatcattaacgat
aatcataagtaccttctggaatttctagaggggttagcagtgccagagcgtagtgttaag
attcaagactgggacacgtcaggacgagtctaccttgattacattcatgtcattcagaca
ctgcaggatatccaacagacggaaagcccaggttatgagctggagcgactgcatacagag
gtgacttctctctgcagtagaatagagcgccttccctgctccaaagctaaagaccgactt
gcacaatcagagatggccaaacgtgtggctaacatccttcgggtggtcttgagtctgcag
caaggtggtgaagggaccccagatccccgacacatccctctttgccagcttgcaccacac
ataggacgtctacccatgccagaggactatgctttagaggaactccgcagccttactcag
tcgtacctgcaagagtatgttatcagtcactga
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