Puntigrus tetrazona (Sumatra barb): 122326293
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Entry
122326293 CDS
T08985
Symbol
gbp1
Name
(RefSeq) guanylate-binding protein 1
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122326293 (gbp1)
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Motif
Pfam:
GBP
GBP_C
MMR_HSR1
RHD3_GTPase
Motif
Other DBs
NCBI-GeneID:
122326293
NCBI-ProteinID:
XP_043076987
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Position
2:complement(20477038..20481444)
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AA seq
619 aa
AA seq
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MSKAGLMSSPVCLVENVNGSLGVCKPAIEFLSQINEPVVVVSVVGLYRTGKSYLMNRLAG
HQSGFALGNTIESKTKGIWMWCVPHPFKDGHTLVLLDTEGLGDVAKGDSKNDSWIFCLAV
LLSSTLVYNSRGTIDNTAVEKLHYVVELTEQIKIRSTEAADEEDEDCKFVQFFPSFTWVV
RDFTLELEIEGKRVTEDEYLEFALQLKKGVNKKVSDYNLPRQCIRSYFPSPRKCFVFPTP
TSPEKMSRLESLQERDLVPDFLKATERFCQHIFYNTVVKTVKGGHRVTGKLLGHLVEIYV
NTIRSGNVPCLDNAVVALANLENKTAVQEALKVYQNGLDKVKNMFPVGVDNISSEHQKFS
SLATAEFMKRSFKDEKGEYMKKLVEEINMYYAVLLQENEMSSEKKCRGLLNSLSSDMNKR
LQDGEYSQPGGYELYCRDRDTIVEKYRREPNKGVSAEAVLNEFLNERQPEANSIRYTDTK
LTENDRKIEEEKERNALLQQKFKEEEEKRIESERMMQVERERQNDQIRQMQEKFNKELEQ
QQQEMGRAIESKLKEQEDLLKKGFSEKADLLNEEITNLKKEKDNSGGFMKEIVTPILGAV
AEILPTFLNYRLMMKGLKL
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagctggactaatgtcttcgcccgtatgtttggtggagaatgtgaacggatca
cttggtgtctgtaagcctgccattgagttcctgagtcagatcaatgagccggtggtggtg
gtgtctgtggtgggactctatcgtacggggaagtcttaccttatgaaccgcctggcagga
caccagtctggttttgctctcggcaacactattgagtcaaagaccaaaggcatttggatg
tggtgtgtccctcatccctttaaagatggacacactctggtgctgctggacacagaggga
cttggtgacgtggccaaaggagactctaagaatgacagctggatcttctgtctggctgtt
ctgctcagcagcactctggtgtacaacagccgaggcacaatcgataacactgcagtggag
aaactgcactacgttgttgagctcacagagcagatcaagatcaggtcgacagaagcagca
gatgaggaagatgaggattgtaagtttgtgcagtttttcccatcattcacctgggtcgtg
agagatttcaccttggaattggaaattgaaggaaagagagtgactgaggacgagtacctt
gaatttgccctccagctcaagaaaggtgtgaacaagaaagtcagtgactacaacctgcct
cgtcaatgtatccgaagctatttcccttcccccaggaagtgttttgtgttccctactcca
acatcaccagaaaaaatgtcacgtttagaaagtttgcaagaacgggaccttgtacctgat
tttctgaaggccacagaacgtttttgtcaacacatcttttacaatactgtggtgaaaaca
gtgaaaggaggacacagagttactggcaaattactcggacacctggttgagatttatgta
aacacaatcagaagtggtaatgtgccctgtctggacaatgcagttgttgctctggcaaat
ctagaaaacaagacagctgttcaagaagctttgaaagtgtatcagaatgggttggacaag
gtaaagaacatgttcccagttggtgtggataatatttcctcagagcaccagaagttcagc
agtcttgccaccgctgagtttatgaaacgctcctttaaagatgaaaaaggggagtatatg
aaaaaactggtggaagaaataaatatgtactatgcagtactgctgcaagagaatgagatg
tcgtcagagaaaaagtgcagaggtctgctgaacagtctgtcctctgacatgaataaacgt
ctgcaggatggagaatacagtcaacctggaggatatgaactctactgcagagacagagac
accattgttgaaaagtaccgcagagaacccaacaaaggtgtatcggccgaggctgtgctc
aatgagtttctaaatgagaggcaaccagaagcaaatagcatccgctatactgacacaaaa
ctcacagaaaatgacagaaaaattgaagaggaaaaggagaggaatgctctgctgcaacag
aagtttaaagaagaagaagagaaacgcattgagagtgagcgaatgatgcaggtagaaaga
gagcgacagaatgaccaaataagacagatgcaggagaagttcaacaaggagctggagcag
cagcagcaggagatgggcagagccattgagagcaagctgaaggagcaggaggatttgcta
aagaaaggctttagtgagaaagctgatctcctgaatgaagagataacaaatctaaaaaaa
gaaaaggataattctggtggttttatgaaggaaattgtgacgcctattttaggagctgtg
gcagaaatacttccaactttccttaactatagactgatgatgaaaggactgaaattgtga
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