Puntigrus tetrazona (Sumatra barb): 122326312
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Entry
122326312 CDS
T08985
Symbol
gabra1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04080
Neuroactive ligand-receptor interaction
ptet04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122326312 (gabra1)
04082 Neuroactive ligand signaling
122326312 (gabra1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptet04040
]
122326312 (gabra1)
Ion channels [BR:
ptet04040
]
Ligand-gated channels
GABA-A
122326312 (gabra1)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
122326312
NCBI-ProteinID:
XP_043077025
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Position
21:18381413..18408393
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AA seq
518 aa
AA seq
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MKSARELRALGGSSIIISSSSSSLELKFSTARISEHHLLASRQKRRVQKFDDKWGFVLWR
MMRGGRGAAWLWIWACLMVTSVLAGKSSSQTADEQKDNTTVFTRILDSLLDGYDNRLRPG
LGERVTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMAVLRLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTVRAECPMHLEDFPMDAHAC
PLKFGSYAYTRAEVVYVWTRGAAQSVVVADDGSRLNQYDLMGQTVDSGVVQSSTGEYVVM
TTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKQKKKKES
LLKKNNTYTAATATAFAPNIARDPGLATIAKSAPPPPTEPKEEPKPKPPEAKKTFNSVSK
IDRIARIAFPLLFGTFNLVYWATYLNKKPKIQGALQPH
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcgcgcgagagctgcgcgcgctcggcggcagcagcatcatcatcagcagcagc
agcagcagcctcgagctcaaattcagcacagcgcgcatctcagagcatcatctcctcgca
tccagacagaaaagacgtgtgcaaaagtttgacgataagtggggtttcgtcctttggaga
atgatgaggggtggaagaggagcagcttggctttggatttgggcctgtttaatggtgacc
agtgttctggctgggaaaagctccagtcagacggcagatgagcagaaagacaacaccacg
gtcttcaccaggattctggacagcctcctcgacggctacgacaaccgtctcaggcccggg
ctcggagagcgtgtaaccgaagtcaagactgacattttcgtgacgagtattgggccggtc
tcggaccacgacatggagtacaccatcgatgtgttcttcaggcagagctggaaggacgag
aggctgaagttcaagggtcccatggcagtgctccgtctcaacaatctcatggccagcaaa
atctggacccccgacacgtttttccacaacggaaagaagtcagtcgcccataacatgacc
atgccgaataaactgctgcggatcacagaggaaggaactctgctttacaccatgaggctt
acagtgagagctgaatgtccgatgcatttggaggacttcccaatggacgcccatgcctgc
cctctcaaattcggcagctatgcctacacgagggctgaggtggtgtatgtgtggacgcga
ggagcggcgcagtccgtggtggtggcggacgacggctctcggctcaatcagtatgacctg
atgggacagacggtggactcgggtgtggtgcagtccagcactggagagtatgttgtcatg
acaacacatttccacctcaaaaggaagatcggttactttgtcatccagacatacttgccg
tgcatcatgaccgtgatcctgtcccaagtgtctttctggctcaacagggaatctgtcccc
gccaggactgtgtttggagtgaccactgtcctgaccatgaccaccctgagtatcagcgcc
agaaactctctgcccaaggtggcctacgccacggccatggactggttcatcgctgtctgc
tacgcctttgtcttctcggctctcattgagttcgccacagtaaactatttcaccaagaga
ggttacgcctgggatgggaaaagtgtggtgccagaaaagcaaaagaagaagaaggagtca
ttgctgaagaagaacaacacgtacacggccgcgacggcgacggcgttcgctccgaacatt
gccagagaccctggtttggcgactattgctaaaagtgccccccctccgccaaccgagccc
aaggaagagcccaaacccaaaccccccgaggccaagaagaccttcaacagcgtgagcaag
atcgacaggatcgccagaatagccttcccgctgctcttcggaacctttaacttggtgtac
tgggccacctacttgaataaaaaacccaaaatacagggcgccctccagccacactaa
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