Puntigrus tetrazona (Sumatra barb): 122326325
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Entry
122326325 CDS
T08985
Symbol
sart1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122326325 (sart1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptet03041
]
122326325 (sart1)
04121 Ubiquitin system [BR:
ptet04121
]
122326325 (sart1)
Spliceosome [BR:
ptet03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
122326325 (sart1)
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122326325 (sart1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SART-1
HIND
Motif
Other DBs
NCBI-GeneID:
122326325
NCBI-ProteinID:
XP_043077066
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All DBs
Position
21:9085983..9092660
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AA seq
777 aa
AA seq
DB search
MGSSKKHKEKEKDRDPEDRHREHKKHRHKDRDKEKDREREKRKRSRSRERSSRGAEKDRS
GKSERSNAETRVKKEKLDPAFEDNSEPGPKSAGGDASLSIEETNKLRAKLGLKPLDLNEN
KKEAGTKEEPLLAEAINPVQIKQQAEMREKLAALKEKRLLNQKLGKVKALGDEEPWLDDT
AAWVERSRKLAKEKEMAEKRAKLLEEMDEEFGVSNLVEQEFAQEKRDSYSSRDLKGLKVQ
HKMDSFKEGETVILTLEDKGVLAEEEDVLVNVGLVDKEKAEKNVELKKKKPDYKPYEEEE
SVDDMVVFKPKSVLSKYDEEIEGEKKKSFRLSSGGFVGGERERELQAIRENLRNQAQSLD
MPALTIASEYYTSQEMVGFKKTKRKVKKIRKKEKSFKPDELLVDEIRSSDFGSRSRGRGR
RQDDEEEGVELGGVSMETSSKASDVLQQSDDIRMADMDISDDEDFTPPEPAVLEEDEAEQ
ELQKQLEKQRKLRQKQMLKDSGEKVAQHMNQLVKTGEDDNDPDKKNNIVFNATSEFCRTL
GDIPTYGLSGNREDQEDIMDFEKDDEKEGGGQSDSDMDDNVGWSTVNLDEEKNQADFSAT
STTILDEEPIVNSGLAAALLLCKNKGLLDTQMQKVARVKTPKAALPNDNYCIEDKMNIDD
KYSRREEYRGFTQDFKEKDNYKPDVKIEYVDESGRKLTPKEAFRQLSHRFHGKGSGKMKT
ERRMKKLEEEALLKKMSSSDTPLGTVALLQEKQKSQKTPYIVLSGSGKSMNANTITK
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgggttcatcaaagaaacacaaggagaaagagaaggaccgggatccagaggaccggcac
cgtgagcacaagaaacaccgtcacaaggatcgagacaaggagaaggaccgcgagcgagag
aagagaaagagatcccgctccagagagagaagcagtcggggagcggagaaagacaggagc
ggtaaatccgagaggagcaatgcagagacaagagtcaaaaaagagaagctcgaccctgct
ttcgaggacaacagcgagccgggtcccaaatccgccggtggcgacgcttcactcagcatc
gaagagaccaataaacttagggccaaactaggtttgaaacccctcgatctcaatgaaaac
aagaaagaggctggaaccaaggaggagcccctcctggccgaggccatcaatcctgtccag
atcaaacaacaggccgagatgagagagaaactggctgctctcaaagagaagcgtctgcta
aatcagaaactggggaaggtgaaggcgcttggagatgaggaaccgtggctggacgacaca
gctgcctgggtggagaggagtcgcaaactagccaaggagaaggagatggcggagaagagg
gccaagctcctagaggaaatggatgaagagtttggagtgagcaatctggtggagcaggag
tttgcgcaggaaaagagggattcgtacagctcacgtgatctcaaagggctgaaggttcag
cacaagatggactctttcaaagaaggggaaacggttatcttaactctggaagacaaaggc
gttctggcggaagaggaggacgtgctggtgaatgtgggtcttgtggacaaagagaaagca
gagaaaaatgtggagctgaagaagaagaagccagattataaaccttacgaagaagaggag
agtgtggatgacatggtcgttttcaagccaaagtctgtgctgtcaaagtacgatgaggaa
atcgagggggagaagaagaagagtttcaggttgagttctggaggttttgtgggaggtgag
agagagcgggagctgcaggccatcagggagaacctgcgcaatcaggcccagtctctggac
atgcctgctctcaccatcgccagtgaatactacacgtcacaggaaatggtgggctttaag
aagaccaaacgcaaagtcaagaaaatcagaaagaaagagaaatcattcaagcctgatgaa
ctcctggtggacgaaattcgaagctcagatttcggatccaggtctcgaggtagaggtaga
aggcaagacgatgaggaggagggggtggagcttggaggtgtttctatggaaaccagcagc
aaggccagtgatgtcctccagcagtctgatgacattagaatggccgacatggatattagc
gatgacgaggacttcacccctccggagcctgctgtattagaagaggatgaagccgagcag
gagctccagaaacagcttgagaaacagaggaaactcagacaaaaacagatgctcaaagac
tcgggagaaaaggtggctcagcacatgaatcagttggtgaagacaggagaggatgacaac
gatccagacaaaaagaacaacattgtctttaatgccacatctgagttttgccgcactctt
ggagacatccccacctacgggctgtcaggcaaccgagaggaccaagaggatattatggac
tttgaaaaggatgatgagaaagaaggaggtggacagtcagactctgatatggatgacaat
gtgggctggagcaccgtcaacctggatgaggagaaaaatcaggcagatttctcagcgacc
tctacgacaattctggatgaagagcccattgtgaactctggtctcgctgcagctctactt
ctgtgcaaaaacaaaggactgctggacacacagatgcagaaggtggctcgtgtcaaaacc
ccaaaagcagctcttccaaatgataactactgcatcgaagacaagatgaatattgatgat
aagtacagcaggagggaggagtacagaggcttcacccaggatttcaaagaaaaggataac
tacaagccagacgtcaaaatcgaatacgttgacgaatccggtcgcaagctcacccctaaa
gaggcgttcagacagctgtcccatcgcttccatgggaagggctctggcaagatgaagacg
gagcggaggatgaaaaagctcgaggaagaggcgctgctgaagaagatgagcagcagtgac
actcctctgggcaccgtcgctcttctgcaggaaaagcagaagtcccagaaaactccttat
attgtgctgagtggcagcgggaagagcatgaatgcgaataccattacaaaataa
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