Puntigrus tetrazona (Sumatra barb): 122326341
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Entry
122326341 CDS
T08985
Symbol
cldn30
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein cldn30
KO
K06087
claudin
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03272
Virion - Hepatitis viruses
ptet04382
Cornified envelope formation
ptet04514
Cell adhesion molecule (CAM) interaction
ptet04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
122326341 (cldn30)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
122326341 (cldn30)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
122326341 (cldn30)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122326341 (cldn30)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ptet03037
]
122326341 (cldn30)
04147 Exosome [BR:
ptet04147
]
122326341 (cldn30)
Cilium and associated proteins [BR:
ptet03037
]
Other cilia and associated proteins
Stereociliary proteins
122326341 (cldn30)
Exosome [BR:
ptet04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
122326341 (cldn30)
Exosomal proteins of colorectal cancer cells
122326341 (cldn30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
TMEM_230_134
DUF1453
Motif
Other DBs
NCBI-GeneID:
122326341
NCBI-ProteinID:
XP_043077090
LinkDB
All DBs
Position
21:8466369..8471035
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AA seq
484 aa
AA seq
DB search
MPSSGCQILGICVATVGFLGSIVICGLPNWKVSAFIGANIVTSQVIWEGLWMNCVVQSTG
QMQCKVYDSLLALPQDLQGARALVIVAIIAGVVGILLSIVGGKCTNFVEEEASKAKVAIA
SGVTFIIAGLLVLVPVCWTANTIIRDFYNPLLVEGQKRELGDCGRGXLNLSEMVSLGMHM
LASALALLGWVGALLSCIMPMWRVTAFIGTTIVTSEIMWEGIWMSCVIQSTGQMQCKPYE
STLALGTDLQAARALTVMTVLLGAVGLVLAFIGGKCTIFMDRSKRSKARIATAAGVTLIV
AGVLCMIPVSWSAGIVVRAFYNPQMADSQRREIGGAIYLGWGASIVLILGGGMLCTTICK
EKAEDDSGRSVKYLIVRSSQAGSSRAGSQRMRPVSVRSLQSAAPSVRSQWSQKAPLNHGG
PPSVGSQQSRPSTTKSQLARVEMMPESEQDEGASTKSQLINEGLDQTLAASEPTETEDAP
KTYI
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcttcgggatgccaaatcttgggaatctgcgtggccacggtcggcttcttggga
agcatcgtcatctgtggcttgcccaactggaaggtgtctgccttcatcggagccaacatt
gtgacctcgcaggtcatttgggaaggattgtggatgaactgcgtggtccagagcacagga
caaatgcagtgtaaggtctacgactctctgctggctcttcctcaagatctgcagggcgcc
agagccttggtgatcgtcgccatcatcgctggggtcgttggaatcctcctgagcatcgtg
ggaggaaagtgcaccaactttgtggaagaagaggcgtctaaagcgaaggtcgctatcgcc
agtggcgtcaccttcatcattgctggacttcttgtcctcgtccctgtctgctggaccgcg
aataccataatcagggacttctacaaccctttgttggtggaaggtcagaagagggagctt
ggggactgtggacgtggctaactgaatctcagcgagatggtttctctgggcatgcacatg
ctagctagcgccttggcgttactgggatgggtgggagccctcctgtcctgcatcatgcca
atgtggcgtgtgacggccttcattgggaccaccattgtaacttcggagatcatgtgggag
ggcatttggatgagctgcgtgatccaaagcacaggtcaaatgcagtgcaaaccgtatgaa
tcaacgctcgcgctaggcacggatctacaggcggctcgggccctcacggtgatgacggtc
cttttgggagcagtgggccttgttttagccttcatcggaggaaagtgcaccatcttcatg
gaccgctccaaaagatccaaagccaggatagccacagcagccggcgtcacgctgattgtc
gccggagttctctgcatgatccccgtctcctggtcggccggcattgtggtgagagcgttt
tacaacccacagatggcagattcgcagcgaagggagatcggtggtgccatttacctcggt
tggggtgcgtccatcgtcctcattttgggaggaggaatgctctgcaccactatctgcaaa
gaaaaagcagaagacgacagcggccgctcagtcaagtacctgatcgtgcgctcttcgcag
gcggggtccagcagggcgggctcccagaggatgcggcccgtctctgtgaggtcgctgcag
agtgccgctccatctgtgaggtcccagtggagtcagaaagctcctttgaatcatggcgga
cctccttctgtgggctcccagcagagcaggccgtcaactacaaagtctcagcttgccaga
gtcgaaatgatgccagaatctgagcaggatgagggggcgtcaactaagtcccagctgatc
aatgagggtttggatcagacgctggctgcctctgaacctaccgagactgaagatgctccc
aagacatacatttaa
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