Puntigrus tetrazona (Sumatra barb): 122326364
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Entry
122326364 CDS
T08985
Symbol
grin1a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1a isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04020
Calcium signaling pathway
ptet04080
Neuroactive ligand-receptor interaction
ptet04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
122326364 (grin1a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122326364 (grin1a)
04082 Neuroactive ligand signaling
122326364 (grin1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptet04040
]
122326364 (grin1a)
Ion channels [BR:
ptet04040
]
Ligand-gated channels
Glutamate (ionotropic)
122326364 (grin1a)
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GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
122326364
NCBI-ProteinID:
XP_043077147
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Position
21:1023624..1048011
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AA seq
951 aa
AA seq
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MRLLLLAALFSCSCVRGGCEPKIVNIGAVLSQKRYEQVFKDAVTQANQVYGRDKFKLTAI
SVTHKANAIQMALSVCEDLISSQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDMMREFRWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENQDQLSYDNKRGPKAEKVLQFNQETNLTALLLEAKELEARVIILSA
SEEDAAAVYKTARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHISD
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYSILNYQKSRLIQVGIYNGTQVVMNKQRKIIWPGGETERPRGFQMSTRLKIVT
IHQEPFVYVKPTMLDGTCKEEFTPNGVLIKKVICTGPNETIPGNTSGRPIVPQCCYGFCI
DLLIKLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTIN
NERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLL
DRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFA
MIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELS
TMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGI
GMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLV
AGGIAAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQPSSSVETQDDRKSGRAD
SDPKKKPSFRSISTTLASSIKRRRSSKDTQYPPTDITGQLNLSDPSVSTVV
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgcttctgctggccgcgttattctcctgctcctgcgtgcggggcggctgcgag
cccaagattgtgaacatcggggccgtcctgagccagaagagatatgagcaggtgttcaag
gatgcggtcacgcaggcgaaccaagtgtacggaagggataaattcaagttgaccgccatc
tccgtcactcacaaagctaatgcgattcagatggcgctgtctgtgtgtgaggatctcatt
tccagtcaggtgtacgccatcctggtgagccatccaccgcagtccaatgaccatctgacg
ccgactccggtctcctacactgcagggttttatcgaataccagtggtagggctcaccacc
aggatgtccatttactcagacaagagcatccatctctcatttctccgcacagtgccaccc
tattcccaccaggcacatgtgtggtttgacatgatgcgggagttccgctggaatcacatc
attctaatcgtcagtgacgaccacgaaggcagagcggcgcagaaaagactagaaactctt
ctggaggagagagagaccaagaataaaaaaaggaactatgaaaaccaagaccaactgtcc
tatgacaacaagagaggacctaaggccgagaaagtgcttcaattcaaccaagagactaac
ttaactgccctgcttctggaggccaaagagctggaggcccgagtgatcattctctctgcc
agcgaggaagatgcagccgccgtgtacaaaacagcacgcttcctcaacatgacaggctca
ggctatgtatggctggtcggggagcgtgagatgtccggtaaagctttgagcgaggcccct
gacgggcttattggcctccagctcatcaatggcaagaatgagtcggcacacatcagtgat
gccgttgctgttgtagcccagtccatccaagagctctttgagaaagaaaacatcacagaa
cctccaaggggctgcgtgggcaataccaacatctggaagactgggccactctttaaaagg
gtactaatgtcttccaagtacccagagggcctaactggacgtgttgagttcaatgatgac
ggtgacagaaaatatgctcattacagcattctcaactaccagaagagcagactgattcaa
gtcggcatttacaatggaacacaagtggtgatgaataaacagaggaagattatttggcct
ggaggtgaaacagaaagaccgagaggattccagatgtctactcgtttaaagatagtgacc
attcatcaggaaccctttgtgtatgtgaagccaactatgctggacgggacctgcaaagaa
gagttcacacctaatggagtcttaattaaaaaggtgatctgcactggaccaaatgagacc
atcccaggtaacacatcaggacgcccaattgttccccagtgttgctacggattttgcatt
gaccttctgatcaaattggcaatgaccatgaacttcacctacgaagtacacctggtggca
gatgggaaatttggaacacaagaaagggtaaataacagtaacaagaaggaatggaacggt
atgatgggcgaactcctgggtggccttgctgatatgattgttgcacctttgacaatcaac
aatgaacgagcccagtacatagaattctccaagcctttcaaataccagggattgactatc
cttgttaaaaaggaaatacctcgcagtacactggactcattcatgcagccttttcagagc
acactgtggctactggtgggtctatcggtgcatgtggtggcggtgatgctttacctacta
gaccggttcagcccatttggaaggtttaaagtaaacagtgaagaagaagaggaggatgcc
ctcaccttatcttcagctatgtggttttcctggggcgtcttgttaaactctggaattgga
gaaggtgccccacgtagtttttcagcgagaatcttgggaatggtgtgggctggctttgct
atgatcatagtagcatcctatactgccaacctggctgccttcctagtgttggaccggcct
gaggagcgcatcaccggcatcaatgacccaaggctgaggaacccatcagacaagttcatc
tatgccacagtgaagcaaagttcggtggatatttacttccggcgacaagttgagctgagc
accatgtaccgccacatggagaagcacaactatgaaagcgccgctgaagccatccaggct
gttcgggacaacaagctgcatgctttcatctgggactctgcggtgctggagtttgaagcc
tcgcagaagtgcgacctggtgaccacgggagagctgtttttccgttcgggctttggcata
ggcatgcgcaaggacagcccctggaaacagaatgtgtccctggctattctcagttcccat
gagaatggcttcatggaggacctagataaaacctgggtgagataccaggagtgtgactca
aggagcaatgccccagccacactcacctttgagaatatggcaggtgtcttcatgttagtt
gctggaggcattgcagctgggatcttcctcatcttcatcgagattgcatataagcgccat
aaagacgcccgcaggaagcagatgcagctagcctttgcggccgtcaatgtttggaggaag
aacctacagccctcttcctctgtagagactcaggatgatagaaaaagtggtagagcagac
agcgacccaaaaaagaaaccctcttttaggtccatcagtaccaccctggcctccagcatc
aagagacgtaggtcctccaaagacacgcaatacccacccacagacattacgggccaactc
aacttgtccgacccgtctgtcagcacggtggtgtga
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