Puntigrus tetrazona (Sumatra barb): 122326548
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Entry
122326548 CDS
T08985
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122326548 (ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122326548 (ndc1)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122326548 (ndc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Curto_V3
Motif
Other DBs
NCBI-GeneID:
122326548
NCBI-ProteinID:
XP_043077444
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All DBs
Position
2:complement(12319670..12327438)
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AA seq
671 aa
AA seq
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MFSLKQNSWFIRKVVIWRAVASIAWSVLLLPMTTAVFVLLSRFSLLHPIQWISDCTSLLT
ASSTIFSLVVLCGVVLITGFFNLEFYTLVPSIPCSRMALLGTVLHPRQCVHSLVYCTMGM
LVMWCASVTIGGRYSTLGSPCRQSESGEAVTCLNEYHLFLLLAGAFMGYSHSFLGVVQNM
YYVSFQPIQQYKYPRFKGCLPMVVKCSVIQALYSARNFAALYFFFGYVPKTWISSTLNLQ
IDSSLQPLDSLTGLLDFSLLYHLSISGAFLYLTWYLTVLLFRIYVTEAYSFPVQSTFTED
AEQCLPKVLAEKNTLVMKFLALQDLALLSQHSLSRRLEVFSLSQPGGHPHNWNAISRECL
SLLSELTQRLVAHQDAVASNGRVKSQSASSNTRSASSSSSVGSGTEEIAETPRLSVPLRT
PGSVFKSSVGGVNSALTAPFTPDVDSPFSSPAIRRLVGQQDPQSPWFGTVQSPHIMRRGP
KLWSASTESQSNGSPPASPATVPSPPAESQKPSFLAQWLQNRREQVKSFLAKRVLIMYLF
NKLPEASSQALFADSQSHIWALQGLSHLVAASFSEDQFGVVQTTLPSILSCLVVLLEAVD
RHFKLPHASSKPVRTICSMGDSTHKTLRFALRAALKTAIYKITTTFGEHLNAVNISTEHR
KRLQQFLEFKE
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgctgaagcagaattcatggtttataagaaaggttgtgatatggagggctgtg
gcgagtattgcttggtcggtgcttctcttgccaatgacaactgcagtttttgtgctcttg
agtagattcagcctgttgcaccccatccaatggatttcagattgcacaagccttcttaca
gcctcaagcaccatcttttctcttgtggtgctgtgtggggtggttctgatcactggcttt
tttaacctggagttctacactttggttccctctataccatgttcacgcatggctctcctg
gggacggtgctccacccgcgacagtgtgttcattctttggtctactgcaccatgggcatg
ctggtaatgtggtgtgcttctgttaccatcggtggacgttacagcactctaggaagtccc
tgcaggcaaagcgagagtggtgaagcagtgacctgtctgaacgagtatcatctctttcta
cttctggctggggccttcatgggatacagtcatagtttcttgggagtggttcagaatatg
tactatgtgtcctttcaacccatacaacaatacaaatatccgcggttcaagggctgtctg
ccaatggtggtgaagtgcagtgttattcaggccttatattcagccaggaattttgctgct
ctttatttcttttttgggtatgttcctaagacctggatctccagcacacttaatctacag
atagacagttctcttcaaccactggattcattgactggactactagacttctccctcctt
taccacctgtcgatcagtggcgctttcctgtacctaacctggtatctcaccgtgcttctc
ttcaggatttatgtcacagaggcctacagttttccagtgcagtccacgtttactgaggat
gcagagcagtgtcttcccaaagttttggctgagaaaaacactttagtcatgaagtttttg
gctctgcaagacctggctctgttatcacaacattctctctcacgcagactagaagtcttc
agtctgagtcagccaggtggtcaccctcataactggaatgccatcagtagggaatgtctg
tctttgctgagtgaactgacacagagactggtggctcatcaggatgcggttgcctctaac
ggccgagtcaagtctcagtctgccagcagtaacaccagatctgcctcttcaagcagctca
gtggggtctggaacggaggagattgctgagacccctcgactcagtgtcccactaaggacc
cctggttcagtctttaagtcttcagtgggaggtgtgaatagcgctttgacggctcctttc
accccagatgtggacagccctttctcttcacctgctattcgacgtctggttggccaacag
gatcctcagtctccctggtttggtacagtacaaagcccccatatcatgaggagagggccc
aaactgtggagtgcctccacagagtcccagtccaacggcagcccccctgcctcccctgcc
actgttcctagtcctcctgcagagagtcagaaacccagcttcctggcccagtggctacag
aacaggagagagcaggttaaaagctttttggcaaagcgggtgctgataatgtatttattt
aacaagcttccagaagcctctagccaagccctgtttgctgacagccagtctcatatctgg
gctctccaaggactatctcatctggtggcagcctctttctctgaggatcagtttggagtc
gtgcagaccacattacccagcattcttagctgcttggtagtcttgctcgaggcggttgac
agacacttcaagctgccccatgcctccagcaaacctgtgaggactatctgcagcatggga
gactccacacacaaaactctaaggtttgcactcagggctgctctgaagaccgccatctac
aagataactaccacttttggagagcacttgaatgctgtgaatatttcaacagaacataga
aaaagacttcagcagttcttggaattcaaggaatag
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