KEGG   Puntigrus tetrazona (Sumatra barb): 122326562
Entry
122326562         CDS       T08985                                 
Symbol
ell2
Name
(RefSeq) LOW QUALITY PROTEIN: RNA polymerase II elongation factor ELL2
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
ptet  Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ptet00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    122326562 (ell2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ptet01009]
    122326562 (ell2)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptet03021]
    122326562 (ell2)
Protein phosphatases and associated proteins [BR:ptet01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     122326562 (ell2)
Transcription machinery [BR:ptet03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     122326562 (ell2)
    Little elongation complex (LEC)
     122326562 (ell2)
SSDB
Motif
Pfam: ELL Occludin_ELL Ribosomal_60s Med3
Other DBs
NCBI-GeneID: 122326562
NCBI-ProteinID: XP_043077467
LinkDB
Position
21:1139245..1152504
AA seq 658 aa
MMAALCEDGTYGLNCGRKSDKISVLHVKLTETAFKALENYQNCKNAPSSQATIRFQGLQG
RIKIPMTDASNGCHNFDFYLSNYGKDNPQGSFECIHQCMSSSGVPHLSSLGTIQDKITVC
ATNDSYQVTKERVTKAEEDKSKNSTKFIRPGGPFRDKKVQHRKPAPSAPDPVPERKQTTP
LNPANTIRKCLTNNPVSQRPYRDRVIHLLALRSYKKLELLGRLQRDGISQKDRNSLGSTL
HQVANLNPKDNSYSLKDFIFREVHRDWPGYTEDERVQCDRILARKLGLNSESVSSSSPTK
EPTSPVKRQPETDFIDPLMSKKPRISHLSNRGPPSSSGRHSSETEDXKPAPTAACPGPSF
HPPPVTGSSSNSPSTPEGRGSQDLPLDQSSICGNSSESYAPRSHTPSPPSQPVSTTSPSS
FSTCTVSTTTITSTTTTSSGHRVSSAASPTANRDGSGSKKPKKSKKHKDKEKKREGERDK
DKDRKRNREHHKEDHCDKEVQPRKKHRNEAEQKHIPANISHESDKEAGKDKPVNSTEVPV
PTKPDYIVKYTAVISMDQRQHYKDDFNAEYDEYRILHARVESVTRRFTKLDAQCRRLAPG
TKEYQEVHEQVLQEYKKIKQHSPNYYEEKQRCEYLHNKLAHIKRLIADFDQRRAQSWL
NT seq 1977 nt   +upstreamnt  +downstreamnt
atgatggcagctctctgcgaggatggcacatatggactcaactgtggccgcaaaagcgat
aaaatatcagttttacatgtcaaactgacagaaacagcctttaaagcgctggaaaactac
caaaactgtaagaatgcaccgtcatcacaggcgacgatacgttttcagggtctccaaggg
cgcattaaaatcccaatgacagacgcttccaatggctgtcataacttcgacttttacctg
tccaactatggcaaagacaatcctcaaggaagctttgagtgtatccaccagtgcatgtct
agctctggagtcccccatctatcctccctgggaacgattcaagacaaaatcactgtatgt
gccaccaatgactcttaccaggtgaccaaagagcgagtgaccaaagcagaggaggataaa
agcaaaaacagcaccaaattcatcagacccggaggaccgttcagagacaaaaaggtccag
caccgtaaacctgccccatcagcccccgacccggttccagagagaaagcagaccacgccc
ctcaacccagccaacaccatccgcaagtgccttaccaacaaccccgtatcacaacggcca
taccgggaccgcgtcattcaccttctagccctgcgctcttacaagaaactagagttgctc
ggcagactgcaaagagacggtatcagccagaaagaccgcaactctttgggctctacacta
catcaggtggccaatctaaaccctaaggataactcctattcgctgaaggactttatcttc
cgtgaggtccacagggactggccgggctacacggaggatgaacgggttcagtgtgacagg
atcctggcacgtaaattgggcttgaattcagagtctgtatcttccagcagtccaaccaaa
gagccaacgtccccggtgaaacgccaacccgagactgacttcattgaccctctgatgtct
aagaagccccgaatctcccatctcagtaaccgaggacccccctcctcttcaggtcgtcat
tcttcagagactgaggacnaaaaacccgcacccacggcggcttgcccaggaccctctttt
caccctccccctgtcacaggctccagttcaaactcccccagtacaccggagggacggggg
tctcaggacctgcccttggaccagagctctatatgcgggaactcctcggagagctacgcc
ccccgcagccacactcccagcccgcccagccagccggtctccacaacgtccccctcttcc
ttctccacatgtaccgtctccacaaccaccattacctccaccactaccaccagcagcggc
caccgcgtttcctctgccgcatctcctacagccaaccgtgacggcagtggcagcaaaaag
cccaagaagtccaagaagcacaaagataaagagaagaaacgagaaggagagagggataag
gataaggaccgaaagaggaatagagagcatcacaaggaggatcactgcgataaggaagta
cagcccaggaagaaacaccggaatgaggcagaacaaaaacacattcctgccaacatcagc
catgaatcggacaaagaagctggcaaagacaagcctgtcaacagcactgaagttccagtc
ccaacaaagcctgattacattgttaagtacacagcagtgatatctatggatcagaggcag
cactataaggatgacttcaatgcagaatatgatgagtatcgcatccttcatgcgcgtgta
gagagtgtgactcgtcgttttacaaaattggacgcccagtgtagacgactggcaccggga
actaaagagtaccaggaagtacacgaacaggtgctgcaagaatataaaaaaattaaacaa
cacagcccaaactattatgaagaaaaacagcgctgtgagtacctgcacaacaaactggcc
cacatcaaacggctcatcgctgacttcgaccagcggagggcgcagtcctggctgtag

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