Puntigrus tetrazona (Sumatra barb): 122326605
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Entry
122326605 CDS
T08985
Symbol
rab39ba
Name
(RefSeq) RAB39B, member RAS oncogene family a
KO
K07925
Ras-related protein Rab-39B
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122326605 (rab39ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122326605 (rab39ba)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
ptet04031
]
122326605 (rab39ba)
Membrane trafficking [BR:
ptet04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
122326605 (rab39ba)
GTP-binding proteins [BR:
ptet04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
122326605 (rab39ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
GTP_EFTU
AAA_22
TniB
Motif
Other DBs
NCBI-GeneID:
122326605
NCBI-ProteinID:
XP_043077561
LinkDB
All DBs
Position
21:complement(10908034..10912910)
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AA seq
213 aa
AA seq
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MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEEARSHVQPHSIVFLL
VGHKCDLEQQRQVSQQEAEKLAAAYGMRYVETSARDAINVERAFTELTRDIYDLVKSGEI
TIQEGWEGVKSGFVPNVVHSSEEVTKSDRRCLC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggaagctatatggctgtaccagttccggctgattgtcattggcgactcgacggtgggg
aagtcttgtttgatcaggcgcttcacagaaggacgttttgcacaggtgtctgatcctact
gttggcgtagacttcttctcccgtctggtggagattgaaccaggcaaacgcatcaagctt
cagatctgggacacggcaggccaagagagatttagatctatcacaagggcttattatcgt
aattcagtgggtggccttttgcttttcgacatcaccaaccgccgctccttccagaatgtc
cacgagtggctggaggaagcgcgcagtcacgtgcagccgcacagcattgtcttcttactg
gtgggccacaagtgtgacctggagcagcagaggcaggtgagccagcaggaggccgagaaa
ctggcagccgcttacggcatgcgctacgtggagacctcggcccgtgacgccatcaacgtg
gagagggccttcacggagctgacgcgcgacatctacgacctggtcaaaagcggcgagatc
accatccaggagggctgggagggcgtcaagagcggcttcgtgcccaacgtggtgcactca
tccgaggaggtgaccaagagcgaccgccgctgcctctgttga
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