Puntigrus tetrazona (Sumatra barb): 122326732
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Entry
122326732 CDS
T08985
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptet03021
]
122326732 (supt6h)
03036 Chromosome and associated proteins [BR:
ptet03036
]
122326732 (supt6h)
Transcription machinery [BR:
ptet03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
122326732 (supt6h)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
122326732 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
S1
HHH_3
S1_RRP5
HHH_9
SH2
Tex_N
Tex_YqgF
DUF7798
Motif
Other DBs
NCBI-GeneID:
122326732
NCBI-ProteinID:
XP_043077785
LinkDB
All DBs
Position
21:8544916..8556781
Genome browser
AA seq
1718 aa
AA seq
DB search
MSDFIESEAEESEEEFEEKDLKPKKQQRFMEDDEEEEEENTEDQDEHGNLRGLIDDGDVE
EEEPQSAAEDSDSGEEVRHRRRKRSYDDYLDDDDLDLIEENLGVKVKRRKKKYSRVKTMD
DEGEDDEKDLIADQIFTGEDGDGEVEDGEAVDTLHPRDDEEEEDDEESDIDDFIVDDDGQ
PITKKKGKKFSGYTDAALQEAQEIFGGDFDFAEFDTEAYDHAEEEEEDQEDESWDRPKKQ
TKRRVGRRSIFEIYEPSELESSHMTDQDNEIRSTDMPERFQLRAIPVKPAEDDELEEEAE
WIYRNAFSTPTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRNQHFEVPFIAFY
RKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFQRMQSYQFEQISADPDKPLADS
TRPLDTTDMERLKDVQSLDELGDVYNHFLLYYGRDIPKMQNAAKASKKKLKKIKEVSEED
GEEAEVEEEEEEEQKGPDLKQASRRDMYSICQSAGLDGLAKKFGLTPEQFGENFRDSYQR
HETEQFPAEPLELAKDYVCSQFNTPEAVLEGARYMVAMQIAREPLVRHVLRQTFQERAKI
NIKPTKKGKKDVDEAHYAYSFKYLKNKPVKELNGDQFLKMCLAEDEGLLAIDICIDLVGV
KGYGGDQTYFDEIKQFYYRDEFSHQVQEWNKQRTLAIERSLQQFLYPQMAKELKNKLVAE
AKDNIVKSCCKKLYNWLKVAPYRPDQQVEEDDDLMDESQGKGIRVLGVAFASGRDTPVFC
SLINGEGEVVDFLRLPYFLKRRNAWREDEREKKLQDIENLKKFLLSKKPHVVAVAGENRD
AHMVMEDIKRTISELEQDSSLPAVGVELVDNELAVLYMNSKKSEADFRDYPPLLRQAVSV
ARKIQDPLVEFAQVCSSDEDILCLKLHPLQEHVVKEELLGALYCEFINRVNEVGVDVNRA
IAHPYTQSLVQYICGLGPRKGSHLLKILKQNNTRLENRTQLVTMCHMGPKVFINCAGFIK
IDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALEEILENP
ERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRAPYRPPNTEEVFNMLTKE
TPETFYIGKLITCVVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHF
DSGSCPGQAIGVRTRLDNAVTGFIPTKFLSDKVVKHPEERVKVGMTVHCRIMKIDIEKFN
VDLTCRTSDLSDKNNEWKLPKDTYYDFDAETDDVKQEEEQKKKQQRTTYIKRVIAHPSFH
NINFKQAEKMMESMDQGDVVIRPSSKGENHLTVTWKVADGIYQHVDVREEGKENAFSLGH
TLWINTEEFEDLDEITARYVQPMAAFARDLLGHKYFQECNGGDRKKMEELLVRTKKEKPT
FIPYFVSACRDLPGKFLLGYQPRGKPRIEYVTITPDGFRYRSQMFPTVNGLFRWFKDHYQ
DPVPGVTPTSSRTRTPASVNATPANINIADLTRAVNALPRNMTSQMFNAIAAVTGQGQNP
NTTPAQWASSQYGYSGGSSAGGGGSSSAYHVFATPQQPMATPMMTPSYSYTTPGQQQAMT
TPQYPSSTPQSSHGHHQHSSSTPSSSSSRVRTPQPKTSSHTAVDWGKMAEQWLQEKEAER
RKQKTPRMTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacttcatcgagagcgaggctgaggagtcagaagaggagttcgaggagaaagac
ctgaagcccaaaaagcagcaaagatttatggaagatgatgaagaggaggaagaagagaat
actgaagatcaggatgagcatggtaacctgagaggactcattgatgatggagatgtggaa
gaggaagaaccgcaaagtgcggcagaggatagtgactctggtgaagaggtccgtcatcgc
cgcagaaaacgaagttatgatgactatctggatgatgatgatctggacctcattgaggag
aatttaggagtaaaagtgaagagaaggaaaaagaaatactcgcgtgtgaaaaccatggat
gatgagggggaagacgatgagaaagacctgatcgcggatcagatctttactggtgaagat
ggagatggagaggtggaggacggagaggctgtggacacacttcacccgagagatgatgaa
gaggaggaagatgatgaggaatctgatattgatgatttcattgtggatgatgatgggcag
cccatcactaaaaagaagggaaagaaattctctggctacactgatgctgccttgcaagaa
gctcaagagatatttggtggtgactttgactttgctgagttcgacactgaggcgtatgat
catgcagaagaggaagaggaggatcaggaggatgagtcatgggatcggccaaagaaacag
accaagagaagagtcggccgccgtagcatatttgagatctatgaacccagtgagctggag
agcagccacatgaccgatcaggacaatgagatccgctctacagacatgccagaaagattc
caattgagggccattcctgtaaagcctgctgaggatgatgaactggaggaggaagctgaa
tggatttacaggaatgccttctctacgccgaccatctccatgcaggagagcacagactac
ctagatcgtgggacaaccactaatttcagcagaaagggccccagtactattgctaaaatc
aaagaagctctcaacttcatgaggaaccaacactttgaggttcccttcattgcattctac
aggaaggagtatgtggaaccagagctgaacattaatgatctgtggaaggtgtggcagtgg
gatgagaagtggactcagctgaagaccaggaagcagaacctgacacgtcttttccaaagg
atgcagtcttaccagtttgaacagatctccgcagaccctgacaagccactggctgactcc
actcgtcctctagacactactgatatggagagactgaaagacgtccagtctcttgatgag
ctgggagatgtctacaaccacttcctgctctactatggccgagacattcctaagatgcag
aacgcagccaaggccagcaaaaagaaactgaaaaagatcaaggaagtgtcagaggaagat
ggggaagaggcagaggtggaggaggaggaagaagaggagcaaaagggtccagacctaaaa
caagcttcccgtagagatatgtacagcatctgtcagagcgcaggccttgatggtcttgcc
aagaagtttggtttgactccagagcagtttggagagaactttcgagacagttatcagagg
cacgaaaccgagcagtttcctgcagagcccttggagctggccaaggactatgtgtgcagt
caatttaacaccccagaggcggttctggaaggcgctcgctacatggtggccatgcagatt
gcccgtgaacctcttgttaggcacgtgctcagacagaccttccaggagagggccaagatt
aacatcaagccaactaagaagggcaagaaggatgtggatgaagcacactatgcttattcc
ttcaagtacctgaagaacaagcctgtgaaagagctcaatggagatcagttcttgaagatg
tgccttgctgaggatgaaggcctgctcgctatagacatctgcattgaccttgtgggagtc
aaagggtatggaggggatcaaacctactttgatgagattaagcagttctactacagggat
gagtttagtcaccaggtgcaggaatggaacaagcagagaactcttgctattgaacgctcc
ttgcagcagttcctttatcctcagatggccaaggagctgaaaaacaagcttgttgctgaa
gccaaggacaatattgttaagtcttgctgcaagaagctgtataactggctgaaggtggct
ccttatcggcctgaccagcaggtagaggaggacgatgacctcatggatgagtcacaagga
aagggtatccgtgttcttggggtggcatttgcttccggcagagatacaccagtgttctgc
tccctcattaatggtgaaggagaggttgtggacttcctcaggcttccttatttcctgaag
aggagaaatgcatggagggaggatgaaagggagaaaaagcttcaagatattgaaaacctc
aagaaattcctccttagtaagaagccacatgttgttgctgttgctggagagaatcgtgat
gctcatatggtgatggaggacatcaagcgcaccatcagtgagctagaacaggactcctct
ctgcctgcggtgggtgtggagctggtggacaatgagctggctgtgctttatatgaacagc
aagaagtcagaggcggacttcagggactatccacctctgcttcgccaggctgtgtctgtg
gctcgcaagatccaggaccctctagtagagtttgcccaagtctgcagcagcgatgaggac
atcctgtgtttgaaactgcatcccctgcaggagcatgttgtgaaagaggagctgctgggc
gctctttactgtgagttcataaaccgggtgaatgaggttggtgtggatgtgaaccgggcc
attgcgcacccctacactcaaagcctggtccagtacatctgtggccttggacctagaaaa
ggctcacacctgctcaagattcttaaacagaataacactaggttagagaaccgaacccag
ttggtcaccatgtgccatatgggacccaaagtcttcattaactgtgctggcttcatcaag
atagacactgcttctcttggagacagcactgactcctatatagaggtcctggacggttct
cgagtacaccctgaaacatacgagtgggctcgtaaaatggcagtggatgctctagagtac
gacgagtctgcagaagatgccaacccagccggagcactagaggagatccttgagaaccca
gagaggctcaaggacctggatctggatgccttcgctgaggagctggagagacagggttat
ggtaataagggaataacattgtatgacatccgagcggagctcagctgtagatataaagat
ctaagagccccgtacaggcctcctaacacggaggaggtctttaacatgctcaccaaggag
actcctgagaccttctacattggtaaactgatcacctgtgtggtgactggcattgctcac
agacggccacaaggtgagagttacgaccaggccatccgtaatgatgagactggtctctgg
cagtgtccattttgccagcaagacaacttccctgagctcagcgaggtgtggaatcacttt
gacagcggctcttgccctggtcaagccatcggagtgagaactaggttggataacgctgtc
acaggcttcataccaacaaagtttcttagtgacaaggtggtgaagcaccctgaggagaga
gtcaaggttggcatgacagtgcactgccgcatcatgaagattgacatcgagaagttcaac
gtggatcttacttgtaggacgtctgacctgagtgacaagaacaatgaatggaagcttccc
aaagatacctactacgattttgatgccgagacggatgatgtgaaacaggaagaggagcaa
aagaagaaacagcaaagaaccacttacattaagcgtgtaatcgctcacccgtccttccac
aacatcaacttcaaacaagcggagaagatgatggaatccatggaccaaggtgatgtggtg
attcgacccagcagtaaaggggagaatcacctgactgtcacatggaaggtggctgatggg
atttatcagcatgtggatgtccgtgaggagggcaaagagaatgcattcagccttggacat
actctttggatcaacactgaggagtttgaggatctggatgaaatcacagcaaggtacgtt
cagcccatggctgcattcgcacgagatctgctcggccacaagtacttccaggagtgcaat
ggaggtgataggaagaaaatggaggagcttcttgtaaggaccaaaaaagagaagccaaca
ttcatcccctacttcgtttcagcttgtagagacctaccaggcaaatttctgctgggttac
cagcctagagggaagccaaggatcgagtatgtaaccatcactccagatggctttaggtat
cgctctcagatgttccctacagtcaatggtctcttccgctggttcaaggaccactaccaa
gatcctgtgccaggcgtcaccccaaccagcagcagaacgagaacaccagcatccgtgaac
gccacacctgccaacatcaacattgccgacttgactcgagccgtcaacgctctcccacga
aacatgacgtctcagatgttcaacgctatagcggcagttacaggccagggccagaatccc
aacacgactccagcccagtgggcctccagtcagtacgggtacagtggtggcagcagtgca
ggaggtggcggcagcagcagcgcttaccacgtgtttgcaacaccacagcagccaatggcc
acgccaatgatgactcccagctactcttacaccacccctggccagcagcaggccatgacc
acgccccagtatcccagcagcaccccacaatcctcacacggacaccatcagcattcgtcc
tccacaccatcgtcctcgtcatcaagagtgcggaccccacagcctaagacaagttcccac
accgccgtggattggggtaagatggctgaacagtggctgcaggagaaagaagccgagagg
agaaagcaaaagacgccccgcatgacaccccgaccttcacctagccccatgatcgagagc
acccccatgtccatcgctggagacgcgactcccctcttggacgagatggaccgatag
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integrated database retrieval system
