Puntigrus tetrazona (Sumatra barb): 122326773
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Entry
122326773 CDS
T08985
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03030
DNA replication
ptet03410
Base excision repair
ptet03420
Nucleotide excision repair
ptet03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122326773 (rfc2)
03410 Base excision repair
122326773 (rfc2)
03420 Nucleotide excision repair
122326773 (rfc2)
03430 Mismatch repair
122326773 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptet03032
]
122326773 (rfc2)
03036 Chromosome and associated proteins [BR:
ptet03036
]
122326773 (rfc2)
03400 DNA repair and recombination proteins [BR:
ptet03400
]
122326773 (rfc2)
DNA replication proteins [BR:
ptet03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
122326773 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
122326773 (rfc2)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
122326773 (rfc2)
DNA repair and recombination proteins [BR:
ptet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
122326773 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
122326773 (rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
AAA_16
RCF1-5-like_lid
Mg_chelatase
Viral_helicase1
AAA_24
AAA_11
Rad17
RuvB_N
AAA_assoc_2
MipZ
AAA_19
nSTAND3
AAA_18
DNAX_ATPase_lid
ABC_tran
AAA_5
AAA_28
AAA_23
AAA_25
AAA_30
MeaB
NTPase_1
SLFN-g3_helicase
RNA_helicase
FtsK_SpoIIIE
DUF815
Motif
Other DBs
NCBI-GeneID:
122326773
NCBI-ProteinID:
XP_043077847
LinkDB
All DBs
Position
21:complement(8221342..8224320)
Genome browser
AA seq
353 aa
AA seq
DB search
MDVEMKEADGEQSQADRPPKKDDAAPKSSSNAYELPWVEKYRPLKLNEIVGNEETVSRLE
VFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAMKDAVLELNASNDRGIDVVRNKIK
MFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPI
QSRCAVLRYSKLRDDQIMMRLTEVVEKESLHVTNDGLEAIIFTAQGDMRQALNNLQSTNS
GFGYINSENVFKVCDEPHPLLVKSMLEHCVNANIDEAYKIIEQLWSLGYSPEDIIGNIFR
VCKTFQMAEYLKLEYIKEIGYTHMKVAEGVNSLLQMAGLLGRLCSKTAAPDAS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgaaatgaaagaggcggacggtgagcaaagtcaagctgacagaccgcctaaa
aaggatgatgctgcaccaaaatcctcatcgaatgcttatgaactaccatgggttgaaaaa
tacagacctctgaagctgaatgaaatagttggaaatgaagaaactgtcagcagactggag
gtgtttgcaagagaaggaaatgtgcccaacataatcattgctggtcctcctggcactgga
aaaacgaccagcattttgtgtttggctcgagctcttcttggtccagctatgaaggatgct
gtgctcgagctgaacgcctcaaacgaccgtggaattgatgttgtgagaaacaaaatcaaa
atgtttgcccagcaaaaggtcaccctccctaaaggtcgccacaagatcataatcttggat
gaggctgacagcatgacggatggagcccagcaggctctcagaagaaccatggagatctac
tccaaaaccacacgctttgctctggcatgtaatgcgtcggataagatcatagagcccatc
cagtcccgctgcgcagtgctgcgttacagcaaactccgagacgaccagatcatgatgcgc
ctgacggaggtggtagagaaggagagcttgcatgtgaccaacgacggccttgaggccatc
atcttcaccgcccaaggagacatgcgacaggctctgaataacttgcaatcaacaaattct
ggatttggttacatcaacagtgaaaatgtgttcaaggtgtgtgatgagccacatcctctg
ctggttaaaagcatgctggaacactgtgtcaatgccaacatcgatgaagcctacaagatc
attgagcagctttggtctctcggatactcaccggaggacatcataggaaacatctttaga
gtgtgtaagacctttcagatggcagagtatttgaagctggaatatatcaaggagattggc
tacacgcatatgaaagtggcagaaggagtgaactctctgttacagatggcagggctcttg
ggtcgcctgtgcagcaagacggctgcgcctgacgcaagctaa
DBGET
integrated database retrieval system
