Puntigrus tetrazona (Sumatra barb): 122326832
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Entry
122326832 CDS
T08985
Symbol
si:dkeyp-50d11.2
Name
(RefSeq) calpain-1 catalytic subunit isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04141
Protein processing in endoplasmic reticulum
ptet04210
Apoptosis
ptet04217
Necroptosis
ptet04218
Cellular senescence
ptet04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122326832 (si:dkeyp-50d11.2)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
122326832 (si:dkeyp-50d11.2)
04217 Necroptosis
122326832 (si:dkeyp-50d11.2)
04218 Cellular senescence
122326832 (si:dkeyp-50d11.2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122326832 (si:dkeyp-50d11.2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ptet01002
]
122326832 (si:dkeyp-50d11.2)
Enzymes [BR:
ptet01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
122326832 (si:dkeyp-50d11.2)
Peptidases and inhibitors [BR:
ptet01002
]
Cysteine peptidases
Family C2: calpain family
122326832 (si:dkeyp-50d11.2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_7
CAPN13-like_C_EFh
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
122326832
NCBI-ProteinID:
XP_043077949
LinkDB
All DBs
Position
21:complement(9179526..9191404)
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AA seq
724 aa
AA seq
DB search
MEPICATGVAARLRSEWDRNEGLGQNNMALKFLGQDFETLRAHCLQSGCLYEDETFPAQQ
SSLGFKELGPSSGKTKGVRWMRPTEFCTDPHFIVDGATRTDICQGALGDCWLLAAIACLT
LNEPLLHRVVPHGQSFHQQYAGIFHFQFWQFGDWVDVVIDDRLPVRDGKLLFVHSAEGAE
FWSALVEKAYAKLNGCYEALSGGCTSEGFEDFTGGVTEMYELKKAPPNLFSIIRRAVERG
SLMGCSIDITSFFDMEAITFKKLVKGHAYSITGVEEVEYRRKLTKLLRIRNPWGEVEWTG
PWSDESREWRDIDPSVRSRLHNCQEDGEFWMAFSDFMREFSRLEICNLTPDALQSSEVKK
WSTSLYPGEWRRGSTAGGCRNYPATFWINPQFKIVLKEPDTESQEECTFLVALMQKNRRK
LRQEGKDMETIGFAVYEVPEEYLGRVGVHLKRDFFLTHTSSARSELFINLREVSSRFCLP
AGEYIIVPSTFEPQKEGDFVLRVFSEKAADSQELDDEISADVPEEPALQESDIDEGFKAL
FAKLAGPEMEINVSKLQMILNRVVGKHKDIKTDGFDKEACRCMINLMDTTGTGKLGLTDF
HVLWEKTKRYLAVFRKFDLDKSGTMSSYEMRLALESAGFKLTNNLFQLIILRYAKPDLNV
DFDSFVSCLIRLETMFKTFKTMDTDEDGLVTFSFTQVCLNCSLIIKKNSIANAFLQHFVF
FLSS
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggagccaatttgtgccacaggggtcgctgctcgtttgaggagtgaatgggatagaaat
gagggattgggtcagaacaatatggccctgaagttcttgggccaagattttgaaacctta
cgtgcccactgccttcagagcggatgcctgtatgaggacgaaacatttccagcccagcag
tcttctttaggattcaaggagttgggccccagctctggaaaaaccaaaggtgttcgctgg
atgcggcccacggagttctgcactgacccacactttattgtagatggggccacacgcaca
gacatctgccaaggagctctaggtgattgttggctgctggcagccatcgcatgccttacc
ctcaatgaacccttgctgcatcgggtagtgcctcatggacagagcttccatcagcaatat
gcaggaatttttcatttccagttttggcagtttggggactgggtggatgtggtaattgac
gaccggctgcctgtcagagatgggaaactgcttttcgtccactcagctgagggagcggag
ttctggagcgccctggtggagaaggcatatgcaaagctgaacggctgctatgaggcccta
tctggaggctgcacgtctgagggctttgaggacttcaccggtggagtgacggagatgtat
gaactgaaaaaagctccacccaacctcttcagcatcatcagaagggctgtggagagaggc
tccctgatgggctgctccatagatattacaagtttcttcgacatggaggcaatcaccttt
aaaaaattggtgaaaggccatgcatactccattactggagtggaagaggtagagtacaga
agaaagctcacaaagctgttgcgcatcagaaacccttggggggaggtggagtggacggga
ccctggagcgatgaatcaagggaatggcgtgatatcgacccgtctgtaaggtcccgtctg
cataactgccaagaggatggagaattctggatggcattcagtgacttcatgcgagagttc
agcaggctagagatctgtaacctgacgccggatgcgctacagagcagcgaggtgaagaag
tggagcacatccctgtatcctggtgagtggagaagaggaagcactgcgggcggatgcagg
aactatccagcaacattttggatcaatccccagtttaaaatagtcttgaaggaaccagat
actgagagtcaagaagaatgcacttttctagtggccttgatgcagaagaatcgccggaag
ttacgtcaggagggaaaagacatggaaaccattggatttgcggtttatgaggtccctgaa
gagtatctgggccgggtgggtgtgcatctgaagcgtgatttcttcctcacccacacgtcc
agcgctcgttctgagctcttcatcaaccttcgagaggtaagctcacgtttctgcctgcca
gcgggggaatatatcatcgtcccctccacctttgagccccagaaagaaggagactttgtg
ctgagggtcttctcggaaaaggctgctgactctcaggagttagatgatgaaatttcagca
gatgtacctgaggagcccgcgctccaggagagcgacattgacgagggcttcaaggcgctt
ttcgcaaagctggcagggccggaaatggaaatcaatgtgtcaaaactccagatgatcctg
aaccgagttgttggcaaacataaagatataaagacagatggatttgacaaagaggcctgt
cgatgcatgataaatcttatggatacaactggcactggaaagctgggactgacagacttc
catgtgctctgggagaagaccaaacgatatcttgcagtgtttaggaaatttgacttggac
aagtctggcacaatgagctcttatgaaatgcgtctggcgctggaatcagcaggcttcaag
ctgaccaacaacttgttccagctgataatcctacgctacgccaagccggatctcaacgtg
gactttgacagctttgtgtcttgtctgatccgcctggagactatgttcaaaacttttaaa
acaatggacactgatgaagatggattggtaaccttcagcttcacacaggtttgtcttaac
tgctcattaataattaaaaaaaattcaatagcaaatgctttcttgcaacattttgttttc
ttcctttcttcttag
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