Puntigrus tetrazona (Sumatra barb): 122326934
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Entry
122326934 CDS
T08985
Symbol
cacna1bb
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04010
MAPK signaling pathway
ptet04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122326934 (cacna1bb)
04020 Calcium signaling pathway
122326934 (cacna1bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptet04040
]
122326934 (cacna1bb)
Ion channels [BR:
ptet04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
122326934 (cacna1bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
122326934
NCBI-ProteinID:
XP_043078085
LinkDB
All DBs
Position
21:complement(2233571..2336643)
Genome browser
AA seq
2455 aa
AA seq
DB search
MIRSARRNSDWKERKSTVIYAARLATLGTWRMLTLGTEFSSWAQSPEPPENKRDRRAAFT
ELSSKEMQAAGDDQNTAECSRYDTVVELERPRKLRNMDVISTHEMCPWEERMARFGDDLP
TRYGGPAGAGRGGARAGGPSGGQRMYKQSMAQRARTMALYNPKQTKQNCFTVNRSLFIFS
EDNVFRKYAKRITEWPPFEYLILTTIIANCIVLALEQHLPAMDKTPMSERLDDTEPYFIG
IFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILTTVGSQFDLRTLRAVRVLRP
LKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGVEFYMGKFHFTCFKLDTG
EKVGDYPCGFERPSRVCPVGTECRQYWTGPNFGITNFDNILFAILTVFQCITMEGWTDVL
YHANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKRQEFLKLRRQQQ
IERELTGYLEWICKAEEVLLAEEDQNAEEKSPLDGAWYRRKQNNPVLKRTKSRKGRNDLI
SAEEGEEHFTDISSVAPPGSPFARASLKSSKNDSSSYFRRKEKRVRFFIRRMVKAQSFYW
IVLCLVGLNTMCVAIVHYDQPEWLTKALYLAEFVFLGLFLTEMTLKMYGLGPRNYFHSSF
NCFDFGVIVGSIFEVVWAAIQPGASFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSM
KSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDSFPAAIMTVFQILTGEDWN
AVMYHGIESQGGVRGGMFSSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEQE
VAAKKNMALQKAMEVKEVSPMSAANISIATFVKQNRDAISRRSSVCSVHSPKEQQRSLQK
LSIWEQRTNQLRRHNVRNSSEALYSELEPEERMRVSSALHLRPDMKAHHDRPLVVEHQDG
SVDNSKNDRDGDTPDCQLSSGHPRKHHRCRGENGDAGEGRHHRHHSRNRELQSGMEHSSN
QDGGNRNHHSAGSPEEGIGMEEREHRHHHSRRSREVNGNGNGNGNGTISNGGRGEGRIRG
HREGEGGNGDRRRHRPRVKAQSTLDGEECRENGGKHRGRPTGTDSLATSPLQSPTEEKPE
DKDNLKNSTRVGPTGVNIPVTITAPPGDTTVIRMNNIDGDSLLLNEEKKDLDELNQNAPK
HILPYSSMFVFGPTNPVRRLCHYVVNLRYFEMCILTVIVMSSITLAAEDPVQANAPRNDV
LKYLDYIFTGVFTFEMVIKMIDLGLLLHPGSYFRDPWNILDFIVVTGALVAFVCLSFMGS
QQSVTRGTKGKDFSTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYIL
FMFIFAVIAVQLFKGKFFHCTDESKALEKDCRGAFLEYGSDGLAMTQPRVWKKYDFHYDN
VLWAFLTLFTVSTGEGWPTVLKHSVDATYEDQGPSPGYRMETSIFYVVYFIVFPFFFVNI
FVALIIITFQEQGDKAMSECSLEKNERACIDFAINAKPLTRYMPQDKQSYQYKIWKFVVS
TPFEYSILTMIAINTVVLMMKFHEAPYLYEEMLKWLNIIFTALFTLECILKVIAFGPLNY
LKEAWNVFDFVTVLGSITDILVTEIKMDKRINLSFLRLFRAARLIKLLRQGYTIRILLWT
FVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIMLSEESAINIHNNFQTFFQALMLLFRS
ATGEAWHEIMLACLSEKPCANDYENTECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNF
EYLTRDASILGPHHLDEFIRVWAEYDPAACGRISYLDMYEMLRHMSPPLGLGKKCPPRIA
YKRLVRMNMPIAEDSTVHFTSTLMALIRTALEIKLASGVLAQRLCDAELRKEINKIWSNL
SSKTVDLLVTPHKHNELTVGKVYAALMIFDYYKQNRAKRLQQQQTAPGTQSKVGVLFRPM
LPLTHLHDQVPLVLKASSQSDTTPQPDAPPTSFHLTNGDAVQSQSSAMKKSPSGDIPQEV
TQEVNRRPIQRGQSEDVPNTYRSQELVEMTDMENDSDGGGYPVLEGHGRAASMPRLNAGF
QRSHLRHTAGTYLAPIADVSPMRRSTSSLTPQRGVREVTLSDYDLERPKMAPGQTLAQER
ERERAHHHHHHHHHRCQRRRDKKHKSLDRAISEEQPPPAADSNTESLPRERARERDRGRS
HERKHHSSSAVERTQRYYSCDRYGGHEQGHSVSAGPSRSTSPGEPHDPNRLKQGVNTAKG
TSVVHTSGTSTPCRGRRQLPQTPLTPRPAVAYKTANSSPVQLNTAQSTGPCPTRLSRGLS
EHDTLLSGSTHRQSPVPVTRIGSDPNLGPLQQDSHLSESDDFHDALSTYGTGRSPRTAAS
IAHTSSGAAPTSTLLSRSQSGVPNGYHYSLGVNAAPGSSGRASGSYQETERDDWC
NT seq
7368 nt
NT seq
+upstream
nt +downstream
nt
atgataagatcggcacggcgcaactctgactggaaggagagaaaatccactgttatctat
gccgcccgactggccacactgggaacatggcggatgttaactctgggcacagagttcagt
tcctgggctcagtctcctgagccacctgagaataagagggacagaagagcagcttttaca
gaactgtccagcaaagagatgcaggcagcgggagatgaccagaatactgcagaatgcagc
agatatgacaccgtggtagagctggagagacccagaaagctgaggaacatggatgtcatc
agcacccatgaaatgtgtccatgggaggagaggatggctcgctttggagacgatctgccc
acccgctatggaggtccagcgggcgccgggagagggggtgcccgggcaggaggtccctcg
ggcggtcaaagaatgtacaaacagtcgatggctcagagagccaggacaatggctttatat
aatcctaaacaaaccaaacagaactgcttcactgtcaaccgctctttgttcatcttcagt
gaggacaatgtcttcaggaaatacgccaaaagaataaccgaatggcctccatttgagtac
ctgatcctcaccaccatcatcgccaactgcatcgtactggccctcgaacagcatctcccc
gccatggacaaaacccccatgtctgaacgcctggacgacacagagccctactttatcgga
atattctgttttgaggccggcattaagatcatcgccttgggctttgtgtttcacaaaggc
tcttacctacgcaacggctggaacgtaatggactttgtggtcgttctgacagggatttta
acaacagtgggttcgcagtttgacttgaggacattgcgggccgtcagagtgctgagaccc
ctcaaactggtgtcaggaatcccaagtcttcaagtagtattaaagtccattatgaaggcc
atggttccccttcttcagatcggactgctgctcttctttgccatcgttatgtttgccatc
atcggtgttgagttctacatgggcaaattccacttcacctgctttaaattggatacagga
gaaaaagttggtgattacccatgtggattcgaacgtccttcaagagtgtgtcccgtaggg
accgaatgtaggcagtactggacaggacccaacttcggcatcaccaatttcgataacatc
ctcttcgccatcctcacagtcttccagtgcatcaccatggaaggatggaccgatgtactt
taccatgccaatgatgcctcgggcaacacctggaactggttgtactttatccctctcatc
atcattggctcctttttcatgcttaacctcgttctgggtgtcttatcaggggagtttgcc
aaagaaagagagcgagttgagaaaaggcaggagttcttgaagctccgcagacagcagcag
attgagagagagcttacaggatacctggagtggatctgtaaggcagaggaggtattgctg
gcggaagaggatcagaatgctgaggagaaatcccctctggatggtgcgtggtacaggagg
aaacagaacaacccagtcctgaagcgtacgaagagcagaaagggtcgaaatgatcttatc
agtgctgaagagggagaggaacatttcacagacatctcctctgtcgcaccacctggatca
ccttttgcacgggctagtttgaagagcagtaaaaacgatagctcctcatacttccgtaga
aaggaaaagagagtacgctttttcattcggcggatggtaaaggcacaaagtttctactgg
attgttctgtgtttggtgggattgaacacaatgtgtgtggctatcgtccattatgaccag
cctgagtggctcaccaaggccctgtacctggcagagtttgtattcctgggtctgtttctg
acagagatgactctgaagatgtacggcctggggcccagaaactactttcactcctcgttc
aactgttttgactttggggtaattgtgggaagtatatttgaggtggtgtgggcagcgatc
cagcctggcgcatcttttgggatcagtgttctgagagccctgcgtcttctccgtatcttt
aaagtaaccaagtattggaactctttgcggaatcttgtggtttcactgttaaactccatg
aagtctatcatcagcttgctcttcctccttttcctcttcatcgtggtgtttgccctgcta
ggcatgcaactcttcgggggccagtttaattttgaagatgaaactcccactacaaacttt
gacagcttccctgcggccataatgacagtcttccagattttgacaggagaggattggaat
gcggtgatgtatcatgggatagagtcccagggaggtgtccgaggtggaatgttctcctcg
gtctacttcattgttctcacactctttggaaactacacacttctcaatgtattcttggcc
attgctgttgataaccttgccaatgcacaggaattgacaaaggatgaagaggaacaagag
gtggcagctaagaaaaacatggctcttcagaaggccatggaagtgaaggaggtcagccca
atgtctgctgccaacatctcaatagcaacttttgtaaagcaaaatcgagatgcaatctct
cgcaggtcttcagtctgcagcgttcactcacctaaagagcagcagaggtcactgcagaag
ttgtcgatatgggagcagcgcaccaaccaactgcgcagacacaacgttcgcaacagcagt
gaagccctttacagcgaactagagcctgaagagcgaatgcgcgtgtcatcggcgctccat
ctacggcccgacatgaaggcccaccatgaccggccgctggtagtagagcaccaagatggt
tctgtggacaattccaagaatgacagagatggagacacaccagactgtcaactgtcctcc
ggccacccaaggaagcaccatcgatgcagaggagaaaatggagatgcaggagaggggcgg
caccatagacaccacagccgaaatagagagctgcagagcgggatggagcacagcagcaat
caagatggaggaaacaggaaccaccactcggctggttctcctgaggagggcatagggatg
gaggagagagaacacagacaccaccattctcgccgatctagagaggtcaacgggaacggt
aatgggaatgggaatggcacgatcagtaatggaggcagaggtgagggaaggatacgaggt
cacagagagggtgaaggagggaatggagataggaggagacaccggccacgtgttaaagcc
cagtccacactggatggagaagaatgcagggagaatggtggaaaacacaggggcagacca
acaggaacagacagcctagccaccagccctctccagtctccaacagaggagaaaccagaa
gacaaagataatctaaaaaacagcaccagagtgggtccaactggagtcaacattccggtc
acaataacagccccaccaggagatactaccgtcattcgcatgaacaatattgatggtgac
agtctactgctgaacgaggaaaagaaagatcttgatgagctaaatcagaatgcacccaaa
cacattctgccatacagctccatgtttgtcttcggtccaactaacccagtgaggcgactg
tgtcattatgtggtgaacctgcggtattttgagatgtgtatccttacagtcatcgtcatg
agcagcatcaccctcgcagctgaagaccctgtgcaggccaatgccccacgcaatgatgtg
ctgaaatacctagattacatcttcactggtgtgttcacgtttgagatggttataaagatg
atcgatcttgggctgctgttgcatcctggatcgtacttcagggacccatggaatatactg
gacttcattgtagtcaccggtgctttggtggccttcgtctgcttgagcttcatgggatcg
cagcaaagcgtgaccagaggaactaaaggcaaggacttcagcaccatcaagtccctaagg
gtccttcgagtcctgagaccattgaagactattaaacgtttgcctaaactaaaggccgtg
tttgactgcgtggtgaactctctcaagaatgtgctaaacatcctcatcgtttacatcctc
ttcatgttcatcttcgctgttattgctgtgcagcttttcaaggggaagttttttcactgc
accgatgagtccaaagccctggagaaggactgcaggggtgcgttcctggaatacggcagt
gatggactggccatgacacagccgcgcgtgtggaagaagtatgattttcattatgacaac
gtcctgtgggcctttctgaccctgttcactgtctctacaggagagggctggccaacagtg
ttaaaacactctgttgatgccacatatgaagaccaaggtcccagtccgggttatcgcatg
gaaacctccatcttctacgtggtctacttcattgtcttccccttcttctttgtcaacatc
tttgtggctttgatcatcatcactttccaggagcagggagataaagccatgtcagagtgc
agcttggaaaagaatgagcgagcttgtatcgactttgccatcaacgccaaacctctgact
cgctacatgccgcaggacaagcagtcttaccagtacaagatttggaagtttgtggtgtca
actccatttgagtactccattctgaccatgatcgctatcaacacagtggtcctcatgatg
aagttccatgaagctccttatctgtatgaggagatgttgaagtggctgaacatcatcttc
acggctctcttcacgctggagtgcattctcaaggtcattgccttcggccctctgaactac
ctgaaggaggcatggaatgtttttgactttgttactgtgctgggtagcatcactgacatc
ctggttactgagatcaagatggataagaggattaatctgagtttcctgagactcttccgg
gccgctcgtcttattaaactcctccggcagggctacaccattcgcatcctgctctggacc
tttgttcagtcctttaaggctctaccgtacgtgtgtctccttattgcgatgctcttcttc
atatacgccatcatcgggatgcaggtttttggtaacatcatgttgtccgaggagtcagct
atcaacatccacaataacttccaaacattttttcaggccctcatgttgttgttcaggagt
gctacaggggaggcttggcatgaaattatgctggcttgtctgagcgagaagccatgtgcc
aatgattatgaaaatactgaatgtggcagtgatttcgcttatttctactttgtctctttc
atcttcctttgttccttcctgatgctgaatctgtttgtcgccgtcatcatggataacttt
gagtacctgacacgtgacgcctctattcttgggcctcatcacctcgacgagttcattcgt
gtttgggctgagtacgaccctgccgcctgtggacgcatatcctacctcgatatgtatgag
atgcttcgccacatgtcccctccactaggtttgggaaagaaatgccctccaagaatcgcc
tataagcggttggtgaggatgaacatgcccatagcggaagacagtacggttcactttacc
tctactttaatggctctcatccgaacggccctggagattaaactggcatcaggagttctg
gctcagcggctttgcgatgctgaattaaggaaggaaataaataaaatatggagtaacttg
tcttcaaaaacagtagacctacttgtgacacctcataaacataatgaattgactgtaggg
aaggtctatgctgctctcatgatttttgactactataagcagaaccgagccaaaagactc
caacagcagcagactgcaccaggcacacagagtaaagttggagtcctcttcagaccaatg
cttcctctaacacacttgcacgatcaggtgcccctagtgctaaaagcctcttctcaatca
gataccacaccacagccagatgccccgcccacatcctttcacctgaccaatggggatgca
gtacaaagccagagcagtgccatgaaaaagtctccatcaggagacatacctcaggaagtc
acacaggaagtaaacaggagacctatccaacggggccaatcggaagacgtgccaaacaca
tacagatctcaggaattagttgagatgactgacatggagaatgactctgatggtggtggg
tatcctgtgctggagggtcacggcagagctgcctccatgcccaggctcaacgctggcttt
cagcggagccacttacgccacaccgccggaacgtatctagcacctatcgcagacgtgagt
cccatgcggcggtctacgtcctcgttgactcctcagagaggggtgcgagaggtcactctg
agcgattatgacctagagagacccaagatggccccgggccagaccctcgctcaggaaaga
gagagggagagagctcatcatcatcatcaccatcatcatcaccgctgccagcggcgtaga
gacaagaagcacaaatcgctggatcgagccatcagtgaggagcagcctccgccagcagca
gattcaaacactgagtcactgccaagggaacgagcacgggagcgagaccgaggccgttcc
catgagaggaagcaccattcatcctcagcggtggaacggacgcagcgatactactcttgc
gaccgctacggcggccacgaacaaggccacagcgtgtccgccgggcccagcagatccaca
tcaccaggagaaccccatgacccaaacaggcttaaacagggagttaacacagctaaagga
acttcagtcgttcatacctcaggcaccagcacaccctgccgcgggcgtagacagctccca
caaacgccccttacccctcggcctgctgttgcctacaagactgccaactcctctccggtc
cagctcaacactgcccagtctacagggccctgccccactcgccttagtcgtggcctgtca
gagcacgataccctactcagcggtagcacccaccgccaatctcccgtgcctgtcactcgt
atcggctctgaccccaacttaggtcccctccagcaagactcgcacttgtctgaatcggac
gacttccacgatgccttgagcacgtacggcacgggccgctctcccaggactgcagcctcc
atcgctcacacttcatcaggtgcagccccaacttccacgctgctctcccgcagccagagc
ggagtccccaacgggtatcactactccctcggagtgaacgcggcacctgggtcgagcggt
agagcatctggaagctaccaggagactgagagagatgactggtgttag
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integrated database retrieval system
