Puntigrus tetrazona (Sumatra barb): 122327197
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Entry
122327197 CDS
T08985
Symbol
trmt13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptet03016
]
122327197 (trmt13)
Enzymes [BR:
ptet01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
122327197 (trmt13)
Transfer RNA biogenesis [BR:
ptet03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
122327197 (trmt13)
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Ortholog
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GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
CpG_bind_C
Motif
Other DBs
NCBI-GeneID:
122327197
NCBI-ProteinID:
XP_043078345
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Position
22:complement(8752424..8757018)
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AA seq
471 aa
AA seq
DB search
MEESVADGVSAPLPGRCAFYVAKKKRYCKMLVGRGKTLCGEHANAGEESEKKRIPCPLDP
KHTVFEDNLAKHLKKCNSKEKPKPIYYMKDINAGSGSEDETKEEITIAERSKEELDELII
KLKTALKGLNTKLIENSLSHSALHEPLNDPKNGDSAFKHLKQQASILGNMELLELLKPNR
CYIEFGAGKGKLSHWIHIALKEAENVHFLLVERSSTRFKVDGKHKNADSTFDRLQVDIQH
LDLRKAPLLREKGLPVIGVGKHLCGAATDLALRCLFEHNCSEEDDEPPTKRVKLHQNEGA
CGDIKPASSTKGRETGKKLIVSGLAIALCCHHRCDWRHYVGKEFFRQKGLGPEEFAAFQR
MSSWATCGMRKFASKIREKPSELKTDEEEEHEMSEKALPDTLSGLMSVEDREQIGWLCKR
LIDHGRLYYLQKKGFETSLKYYTSRDVSLENVLLTAVPAANQNRDESQQTS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtctgtggcggacggcgtgtcggcgcctttacccgggcgatgtgctttttat
gtagcaaaaaagaaaagatactgcaagatgcttgttggacgtgggaagaccttatgtgga
gaacacgcaaacgctggtgaagagagtgagaaaaaacgaataccctgtcctttggacccg
aaacacactgtatttgaagataatttggctaaacacctgaagaaatgtaactctaaggag
aaaccaaaacctatttattatatgaaagacatcaatgcaggttctggaagtgaggatgaa
accaaagaggagataaccatcgctgaacgatctaaagaggaactggatgagctaatcatc
aaactcaaaactgcattgaaaggtctaaataccaaacttattgaaaactcactgtcacat
tctgctctacacgagcctctaaatgacccaaagaatggagattctgcctttaaacacctc
aagcaacaggcctcgattcttggaaacatggagcttttggaactgctcaaaccaaataga
tgctacatagagtttggagcagggaagggaaaactgtcccactggattcacattgctctt
aaagaagctgaaaatgtccattttttacttgtggaaaggtccagtactcgctttaaggta
gatggcaagcacaaaaatgcagactcaacttttgataggcttcaggttgatattcagcac
cttgatttacggaaggcccctcttttgagagaaaaaggacttcctgttattggtgttggg
aagcacctgtgtggtgcagcaactgatctagcccttcgttgtttattcgagcacaactgc
tccgaggaagatgatgaacctccaaccaagcgtgtaaaactccatcagaatgagggtgct
tgtggtgatattaagcctgcttcctcaaccaaaggccgggaaactggtaaaaagctcata
gtgtcaggactggctattgcgctttgctgccaccaccgctgcgactggagacactatgtg
ggaaaagagttcttcaggcagaaaggtcttggaccggaagagtttgctgcctttcagcgc
atgtcgagctgggccacatgtgggatgagaaaatttgcctctaagataagagaaaaacca
agtgaactcaaaacggatgaagaggaagagcatgagatgagcgaaaaagctttacctgat
accctcagtggtttgatgtcagttgaagatcgggaacagatcggatggctttgtaaacgt
ctgattgaccatggcagattgtattacctccagaaaaaaggctttgaaaccagcctgaaa
tattacacaagcagagacgtttcgttggagaatgtgttactaactgctgttcccgcagcc
aatcagaatagagatgaatctcaacagacttcttaa
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