Puntigrus tetrazona (Sumatra barb): 122327310
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Entry
122327310 CDS
T08985
Symbol
zfr2
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger RNA-binding protein
KO
K13203
zinc finger RNA-binding protein
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptet03041
]
122327310 (zfr2)
Spliceosome [BR:
ptet03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122327310 (zfr2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_C
DZF_N
zf-met
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
122327310
NCBI-ProteinID:
XP_043078513
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All DBs
Position
22:complement(3017470..3034197)
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AA seq
1007 aa
AA seq
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MMAASNYYGFTHAAAAAAAAAGPQYSAQPPPAYSHPTTGSYSVQAAPGVAHAVTASYPAA
AQPASPAVTAPYPAYQPHPGPNYGYRQPETSPQLTTTPQTYQVLAEPENYNYGRPPPVSS
YENKQYFQTSIAPAQRTATEAYFQTGLKSGYSPTSTAYSQPPVQRQVAALKPPPAVSSVS
SSYTIYPTSTSVQQTPAPISTYTPSSSFNSTAATSYSAGLSYSSYESSGYTSAPXYFQPA
QLAPPQPQALQQPQQQPPPPQQTQQPPKQIANSSWSSAASPAVASPALNTYKKPVFHQNK
IQKPKGPPKQPQLHYCDICKISCAGPQTYREHLEGQKHKKKEAAQKSGSQVTNGPRGVQT
QLRCELCDVSCTGADAYAAHIRGSKHQKVVKLHTKLGKPIPSTEPVFVSSAPAAVTMTAS
KTAAAATTTPTPTSLAQKTPAAALSKPVVSPAKKPATTKAAIIGSRTITPAQVKLEETKP
PVAKTDTLSDDDDGDGAGAQGDIQPVGHDYVEEVRNDDGKVIRFHCKLCECSFNDPNAKD
MHLKGRRHRLQYKKKVNPDLPVEIKPSNRARKLLEVKLRKQKQKSVLKRQQEDEQRWHIE
MSRRYEEDMYWRRMEEEQLYWVEMRHRMAPPPLMGRPSIPVPPLLPVRRPDSPDDRHIMA
KHSAIYPVEEELQAVQRIVSHSERALKLVSDSLLEKEACPADDDDDNDSTDKQSQESQAR
ILKGVMRVGILAKGLLLRGDRNVQLILLAAKKPTASLLRTVAEQLPKQLATFSEDQYEVQ
VHPEEANIVIFSSKEPKMQVTISLTSPVMREDPVPNMEKASEKEPPDVLNRTKCLEYLAS
LRHAKWFQARANGLQSCVIIIRVLRDLCQRVPTWGKMPDWAMELLVEKAISSASGPLSPG
EALRRVLECIASGILLPDGPGLLDPCEKGQTDALGNMSKQAREDVTASAQHALRLLAFRQ
IHKVLGMGSLPVSKAGARNRKRRRDGSDPGEGEADGKKDKKDDSHDS
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggccagtaattattatgggttcacgcatgcagccgccgccgccgccgccgcc
gccggtccgcagtacagcgcccagccgcctcctgcgtattcccacccgaccacgggcagc
tatagcgtccaggccgcccccggagtggcccacgcggtgacggcctcgtaccccgccgcc
gcccagccggcgagccctgcggtgaccgccccttaccccgcctaccagccccaccccggc
cccaactacggctaccggcagcccgaaacgtccccccaactcaccaccacccctcaaacc
taccaggtgttggccgaaccggagaattacaactacggccgcccgccgccggtcagcagc
tacgagaacaagcagtactttcaaacgagcatcgcacctgcgcagagaaccgccaccgag
gcctacttccagacagggctgaagagtggctacagccccacgagcacggcctacagtcag
ccgcctgttcaaagacaggtcgccgctctgaagccccctcccgctgtgagctcggtgtcc
tccagctacaccatctacccgacatcaaccagcgtgcagcagactccggcccccatatcc
acttacacccccagctcttccttcaactccacagctgctacgtcctactccgccggtctc
agctattccagctatgagtctagcggctacacgtccgcgccgtagtactttcagccggct
cagctggcgccccctcagcctcaggccctccagcagcctcaacaacagcctccgccgccg
cagcagacgcagcaacctcccaaacagatcgccaactcctcctggagcagcgcggccagc
cccgccgtcgccagccccgccctcaacacgtacaagaaacccgttttccatcagaacaag
atccagaagcccaaaggcccgccgaaacagcctcagctgcactattgcgatatctgcaag
ataagctgtgctggtccgcagacgtatcgagaacatctggaaggacagaagcacaagaag
aaagaggcggctcagaagagcggcagtcaggtgacgaacggacctcgcggcgtccagacg
cagctgcgctgtgaactgtgcgatgtctcgtgcaccggcgcagatgcgtacgccgcgcac
atccgaggatccaagcaccagaaggtggtgaagttgcacaccaaacttggcaaacccatc
ccttccacggagcccgttttcgtgagctctgcccctgctgccgtgacgatgactgctagc
aagacggcggcggcggcgacaaccactcccacccctacatcacttgcgcagaagacgccg
gcggcggctctttccaaacccgtggtgtctcctgcgaagaaacctgccactactaaagct
gccattatcggcagcagaacgattacaccggctcaggtgaagctggaggagacgaagccg
cccgtggcgaagacggacactttgagcgacgatgacgacggtgatggcgctggagctcaa
ggagacattcagcccgtgggacatgattacgtcgaagaggttcgaaatgacgacggaaag
gtgattcgttttcactgtaaactgtgtgaatgcagtttcaatgatcccaacgctaaagac
atgcacctgaagggacggagacaccggctgcagtacaagaaaaaagtgaacccggatctg
ccggtggagatcaagcccagtaatcgagctcggaaacttctggaagtcaaactgcgaaag
cagaagcagaaatctgtgctgaagagacaacaggaggacgaacagcgctggcacatagaa
atgagcaggaggtacgaggaggacatgtactggaggagaatggaggaggagcagctgtac
tgggtggagatgaggcacagaatggccccgccccctttaatgggccggcccagcattcca
gtgccacctctgttgccagtgcgccggcccgattcgcccgacgatcgccacatcatggct
aaacactcggccatctaccccgtggaggaggagcttcaggccgtccagcgaatcgtctcg
cattctgagcgtgcgctcaaactggtgtccgattcgctgctggagaaagaggcgtgtccc
gcggatgacgacgacgacaacgactcgacggacaaacagtcccaggagtcccaggcccgt
attctcaaaggagtcatgcgtgtgggaatcctggctaaaggtctcctcctgcgcggcgac
cgcaatgtccagctcatcctgttggcggccaagaagccgaccgcctctctgttgagaacc
gttgcagagcaactgcccaaacagctagcgaccttttctgaagatcagtatgaggtgcag
gtacaccctgaggaagccaacatcgtcattttttcaagcaaggaaccaaaaatgcaggtc
accatctctcttacctcgccagtgatgcgcgaagaccccgtccccaacatggagaaagcg
tcagagaaagaacctccggatgttcttaacaggaccaagtgccttgagtatttagcatct
ctgcgacatgctaaatggtttcaggctcgggcgaacggtcttcagtcttgcgtcatcatc
attcgggttctgcgggatctgtgtcagcgcgtacctacctggggcaagatgcctgactgg
gccatggagctgcttgtggaaaaggctataagcagtgcatcaggtccactcagccccgga
gaagctctgcggagggtcctcgaatgcatcgctagcgggattctcctgcccgacggtcca
ggtctgctcgacccctgtgagaaaggtcaaacggatgctctggggaacatgtccaaacaa
gcccgggaggacgtgaccgctagtgcccagcacgccctgcgactcctggctttccgtcag
atccacaaggtcctcggcatgggctctctgccggtctccaaggccggcgctcgaaaccgc
aagaggcggcgcgacggcagcgaccccggcgagggagaggccgacggaaagaaggacaaa
aaagacgattctcacgactcctga
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