Puntigrus tetrazona (Sumatra barb): 122327377
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Entry
122327377 CDS
T08985
Symbol
rad23ab
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein b
KO
K10839
UV excision repair protein RAD23
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03420
Nucleotide excision repair
ptet04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122327377 (rad23ab)
09124 Replication and repair
03420 Nucleotide excision repair
122327377 (rad23ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ptet03051
]
122327377 (rad23ab)
03400 DNA repair and recombination proteins [BR:
ptet03400
]
122327377 (rad23ab)
Proteasome [BR:
ptet03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
122327377 (rad23ab)
DNA repair and recombination proteins [BR:
ptet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
122327377 (rad23ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
UBA_3
Crinkler
Rad60-SLD_2
Dsc3_N
UBA_2
Radical_SAM
CUE
Ubiquitin_4
Motif
Other DBs
NCBI-GeneID:
122327377
NCBI-ProteinID:
XP_043078634
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Position
22:complement(2880554..2887494)
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AA seq
419 aa
AA seq
DB search
MLTITLKTLQQQTFKVQIDEELTVKALKEKIEEEKGQDAFPAVGQKLIYAGKILNDDIPL
KEYKIDEKNFVVVMVTKSKPAAPSQAPAPAPAAAATVSATVDETPEHTPSTPAAPPAAST
VPVSAPAPAPIEPAASAEPAPPVTAPPAASEPAEDKPEPVSATPAPISEEENQEAQEEQA
IAQSEASITDDLGLLEAAASILVTGQAYENLVAEIMSMGYEREQVIAALRASYNNPDRAV
EYLLMGIPTESEQPPQEVVRPTPVSNPTPPAPQRPQPPPAAAGAESGAAQASANPLEFLR
NQPQFQQMRQIIQQNPALLPALLQQLGRDNPQLLQQITQHQERFVQMLNEPHGGEAGAAE
APSAPHTNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQNFDDE
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgatcactctgaagaccctccagcagcagacgttcaaagtgcagatagacgag
gagctgacggtaaaagctcttaaagagaagatagaggaagaaaaggggcaagatgctttt
ccagctgtcggtcaaaaactaatctatgcaggcaaaattttgaatgacgatatacctcta
aaagaatataagatagatgagaagaacttcgtcgtggtgatggttacaaagtccaaacct
gcagcaccttcacaagctcctgctcccgcgccggcagctgccgctaccgttagcgcaact
gtcgacgagacccctgaacacacgccctcaactcccgctgcgcctcctgctgcatctaca
gtgcctgtatcggcccccgctcccgctcccatagaaccggcggcatcagcggagcccgca
ccacccgtcacagcgccccctgctgcgtcggagcccgctgaggacaaacctgagcctgtt
agcgcgactcccgctccgatctcagaggaggagaaccaggaagcccaagaggagcaggcc
atcgcccaatcagaggccagcattacagatgatttgggtcttttagaagcagccgcctcc
atactagttacaggtcaagcgtatgagaatttggttgcggaaatcatgtcaatgggttat
gagagagagcaggtgatcgccgctttacgagcgagttataacaatccggacagagccgtg
gagtacctgcttatgggtattcccacagaatcggagcagccgccgcaggaagtagtgcgg
cccacgccggtgtccaaccccacccctccagcaccacagagacctcagccgccgcccgcc
gcagccggtgcggagtcgggagcggcgcaggcctcggcgaacccgctggagttcctgagg
aaccagcctcagttccagcagatgcgtcagatcatccagcagaacccggctctgctcccg
gcgctcctgcagcagctcggccgagacaacccccagctcctgcagcaaatcacgcagcat
caggagcgattcgtgcagatgttgaacgagccgcacggaggcgaggccggagccgctgaa
gctcccagcgcaccacataccaactacatccaggtcacgccgcaggagaaggaggccatc
gagaggttaaaagctctggggtttccagagggactcgtcatccaagcctacttcgcctgc
gagaagaacgaaaacctcgccgcaaacttcctgctccagcagaactttgacgatgagtga
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