Puntigrus tetrazona (Sumatra barb): 122327688
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Entry
122327688 CDS
T08985
Symbol
hnrnpm
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M isoform X1
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122327688 (hnrnpm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptet03041
]
122327688 (hnrnpm)
Spliceosome [BR:
ptet03041
]
Common components
Common spliceosomal components
hnRNP proteins
122327688 (hnrnpm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_MARF1
RRM_3
RBD_DEAH11
HnRNP_M_NLS
RRM_5
DUF7552
Motif
Other DBs
NCBI-GeneID:
122327688
NCBI-ProteinID:
XP_043079124
LinkDB
All DBs
Position
22:9465508..9472502
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AA seq
687 aa
AA seq
DB search
MSSEVKSEKPEKQEQGNAVNGKSNHESRKERPQKRGGGGRFEPYGNPNKRYRVFVSNIPY
DVKWQTLKDLMKEKVGEVTYVEHLMDGEGKSRGCAVVEFRTEELMKKAVEKVNKHVMNGR
PLKVKEDPDGVIAQREANRAHGGGGGGGGGPPGMGGGMGGGMGGGMGMGMGPGPGGPSMV
NIPPSLMNNPNIPNEIIHGLQAGKIGSTIFVANLDYKVGWKKLKEVFGMAGAVVRADILE
DKDGKSRGMGTVTFEMPIEAVQAVSMFNGQLLFNRVMHVKLDEKSLPKGDFAPPDRPPAL
PRGLSGVGLGLGPGGQPIDATQLNRGGMGNMGPGGMDGMGFGGMGRMGGMDNFGGGMNNM
DRFGPSGMGRMNDMDRGIGGGFDRDFGGRNDMGMSRSNFGDSFDRGMGNSMGMDRMNSGM
DRLGGGGGGGGGGGGGGGGGMDRMGGLDRMGMDRMDRMSDLDRLGSGFDRMGSGLDRLGP
SMDRLGSGLDRMSSSVDRMGPGGFDRLGPSGMDRMSGGMDFASPMGMDRMNTGLDRMGSN
FDRMGSGGMDRFPSSGLDRMGSGMDRMGSGGVGGQFDRPADMDRGNFGTPFSGSGQGGPG
SGGANARKGCQIFVRNLPFDFTWKMLKDTFNSCGIVQYADIKMENGKSKGCGVVRFDSPE
TAERACRTMNGYRLNGREIDVRIDRNA
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgaggttaaatcggagaagccagagaaacaagaacaaggaaatgcggtgaac
ggcaagtccaaccatgagtcgagaaaggagaggccccagaagcgcggtggagggggccgc
tttgaaccttacgggaaccccaacaagagataccgtgtgtttgtcagcaacatcccctat
gatgttaaatggcaaaccctcaaagatctcatgaaggaaaaagtgggtgaggtaacgtac
gtggaacacttaatggacggagaaggcaaatcaaggggttgtgcggtggttgagttcaga
actgaagagctcatgaaaaaggcagtagagaaagtcaacaaacatgtcatgaacggtcgt
cctctcaaggtcaaagaggatccagacggcgtgattgcccagcgtgaagctaatcgggct
cacgggggtggaggtggaggcggcggtggacccccaggcatgggtggaggcatgggagga
ggtatgggtgggggaatgggcatggggatgggcccagggcctggcggtccttccatggtc
aacatcccacccagtctcatgaacaaccccaacatccccaacgagatcattcacggactc
caggctggaaaaatcggaagcaccattttcgtggccaatctggactacaaggtcggatgg
aagaagctcaaggaggtgtttggaatggctggagcggttgtgcgtgcagatattctggag
gataaagatgggaagagcaggggaatgggaacggtcacatttgagatgcccattgaagct
gttcaagcagtctcaatgttcaacggacagcttctcttcaacagggtcatgcacgtcaaa
ttggatgagaaatctcttcccaaaggtgactttgcacccccagaccgtcctccagcgctt
cctcgtggtttgagtggtgtcggtctcggtttgggacccggcggtcaacccatcgatgct
acccagctcaaccggggtggaatgggcaacatgggaccaggaggaatggatggaatggga
tttggtggcatgggtagaatgggagggatggataattttggaggtggcatgaacaatatg
gatcgtttcgggccttctggaatgggaagaatgaatgatatggaccgtggaattggtggt
ggctttgatagagatttcggtggccgtaatgacatgggtatgtcccgtagcaactttgga
gactcatttgaccgaggaatggggaactccatgggaatggatcgcatgaactctggcatg
gaccgtcttggtggtggtggtggaggtggtggtggtggtggtggaggcggtggcggcggc
atggaccgtatgggaggcctggatagaatgggaatggatcgcatggaccgaatgtcagat
ctggatcggttgggatccggcttcgaccgaatgggttcagggcttgaccgtcttgggccc
agcatggatcgtctaggatcaggccttgaccgcatgagctccagcgtggaccgcatgggt
cctggtgggttcgaccgcttgggcccgtctggtatggatcgcatgagcggcgggatggac
tttgcctctcctatgggcatggacaggatgaacacaggcctcgaccgaatgggttcaaac
ttcgaccgcatgggctccggtggcatggaccgcttcccctcctcgggtctggaccgcatg
ggctccggcatggaccggatgggctctggtggcgtcggtggccagtttgacagacctgct
gatatggatcgtggcaattttgggactccttttagtgggtctggacaaggagggccaggg
tctggtggagccaacgccaggaaaggctgtcagatttttgtcagaaatctgccctttgac
ttcacttggaagatgttgaaggacactttcaattcatgtggcattgtgcagtatgcagac
ataaagatggagaacggcaagtccaagggctgcggtgtggtgcgctttgacagtcctgag
accgccgagcgggcctgtcgcaccatgaacggctaccggctcaacgggagagagatcgac
gtcaggattgacaggaatgcataa
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