Puntigrus tetrazona (Sumatra barb): 122327940
Help
Entry
122327940 CDS
T08985
Symbol
rbbp5
Name
(RefSeq) retinoblastoma-binding protein 5 isoform X1
KO
K14961
COMPASS component SWD1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptet03036
]
122327940 (rbbp5)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
122327940 (rbbp5)
COMPASS/SET1 complex (yeast)
122327940 (rbbp5)
MLL-HCF complex
122327940 (rbbp5)
MLL3/MLL4 complex
122327940 (rbbp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
ANAPC4_WD40
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_LRRK2
Beta-prop_NUP159_NUP214
WDR54
Beta-prop_WDR75_2nd
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_TEP1_C
Beta-prop_WDR11_1st
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
122327940
NCBI-ProteinID:
XP_043079570
LinkDB
All DBs
Position
22:complement(871947..878948)
Genome browser
AA seq
536 aa
AA seq
DB search
MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAK
IISAHIHPVCSLSWSRDGHKLVSASTDNIVSQWDVLTGDCDQRFRFPSPILKLQYHPRDM
DKVLVCPMKSAPVLLTLSDSKHVVLPVDDDSDLNVVAAFDRRGEYIYTGNAKGKILVLNT
NTQDLVASFRVTTGTSNTTAIKSIEFARKASCFLINTADRIIRVYDGREILTCGRDGEPE
PIQKLQDLVNRTPWKRCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLD
VAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDRS
EPEQTGADAAEDEEVDVTSVDPIPAFCSSDEELEDYKALLYLPIAPEVEDPEENPFGPPP
DAAGQNATPDDGSAHSGPGDKKQRQPSSDGGPPKKKIRTTTIELQGVPSDEVHPLLGVKG
DSKSKKKAAGRPKGSKGKDKDSPFRPKVCRDRAEGLGTPGNLVSAAYKQHEVQGLD
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgaatctggagttgctcgagtcgttcgggcagaattatccagaggaggccgatggcacc
ctggactgcatcagtatggctctgacctgtacgtttaaccgctgggggacgctgctcgct
gtcgggtgtaatgacggacgcatcgtcatctgggactttctgacgcgaggaatcgccaag
atcatcagcgcacacatacacccagtctgctcactcagctggagcagagacggacacaag
ctggtcagtgcgtccacagataacatcgtgtctcagtgggacgtcctgacgggggactgt
gaccagcgcttccgcttcccctcacccatcctcaagctgcagtaccacccccgagacatg
gacaaggtgctggtgtgtcccatgaagtctgctcctgtcctgctgacgctgtctgactcc
aaacacgtggttctgccggtggacgacgactccgacctcaacgtggtggcggccttcgac
cggcgcggagagtacatctacaccggcaacgccaagggcaagattctagtgctgaacaca
aacacacaggacctggtggcgtcgttcagggtgaccacaggaaccagcaacaccaccgcc
atcaagtccatcgagttcgcacgcaaggccagctgtttcctcatcaacacagcggaccgc
atcatccgtgtgtatgacggccgcgagatcctgacctgcggcagagacggagaacctgag
cccatacagaaactacaggacctcgtcaacaggacgccgtggaagcgctgctgtttctcg
ggggatggtgagtatatcgtagcaggttctgcccggcagcatgcgctctacatctgggag
aagagcatcgggaacctggtgaagatcctccacgggactcgaggagagctgctgctggac
gtcgcttggcatccggtgcgtccgatcatcgcctccatctccagcggagtcgtgtccatt
tgggcccagaaccaagtggagaactggagtgcgtttgcgccggactttaaagagctggac
gagaacgttgagtacgaggagagagaatcagagtttgacatcgaggacgaggacaggagt
gaaccggagcagaccggagcggacgctgctgaggacgaggaggtggacgtcacttcagtt
gatcccatcccagcgttctgcagcagtgacgaggagctggaggactataaggcgctgctg
tatttgcccatcgctccggaggtggaggaccctgaggagaacccgttcggccctcccccc
gacgccgcgggtcagaacgccacgcccgacgacggctccgcccacagcggccctggagac
aaaaaacagcggcaaccgtcgtccgacggagggccccccaagaagaagatccgcaccacc
accatcgagctgcagggcgtccccagcgacgaggtccatccgctgctgggcgtgaaggga
gacagtaagtccaagaagaaggcggcggggcggcccaagggatcgaaaggtaaagacaaa
gactctccgttcagacccaaagtctgccgggacagagcagaggggctggggacgccagga
aacctggtgtcggcggcgtacaagcagcacgaggttcagggtctggactga
DBGET
integrated database retrieval system
