Puntigrus tetrazona (Sumatra barb): 122328013
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Entry
122328013 CDS
T08985
Name
(RefSeq) LOW QUALITY PROTEIN: rootletin-like
KO
K16469
rootletin
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ptet03037
]
122328013
Cilium and associated proteins [BR:
ptet03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
122328013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
INO80F
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
122328013
NCBI-ProteinID:
XP_043079676
LinkDB
All DBs
Position
22:complement(565879..584661)
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AA seq
1996 aa
AA seq
DB search
MSESENPSESKLEAVIQRLEESVLSEEKRLTVRGSSPDEPVSSLPARVREIVSRSLGDGG
MSSGLSLQDENRVLQVELSRVEDLLAHSRAERDELAIKYSAISERLEQVLHLETGEEGRG
SPESRSLAQQNVDLRRRLDEEQAAYKRKLTAYQEGQQRQAQLVQKLQAKVLQYKKKCADL
EQTLLERSTGQCDGSSNGQRRDEDEPSSELESALIRLEEEQQRSSGLSAVNAMLREQLEQ
AGLANEALSQDIRRLTADWTKAREELEQRESDWRREEESFHSYFSSEHSRLLALWRQVVG
FRRHVCELKSATERDLSETRNELASVAQSVQLQCVSVCADLRSREDGSALLLERETAQRQ
QLEQQLRETVTEMMTLQAKSDSERAELNTRLVDAVRELERLKARVEDREQEVITLRRKLQ
EQRSLEETEVHSLKKHTAALQNTLRDITQMVLSDSDGVDGNTEESLLPLIHSSSSSSSSI
LPDSCLSALLSTLTSRQIQLQDLRERLQSAQSSVQQLRRRQEEAESGRREAELRAQALQA
ERDEAQRERESTVRERHRLRQERDTLSSEKDVAEKTAQTVQTQTQLLQLECERLQLAAPS
SGAAGRERRGSERKRESVITTAETGETERSSXERAQQLWEESERRASSLRAELASLRESL
QQETADRQMMETENRQLSDTLNRSGSSHTELSLALSKLHSEDSSLRDSLVKMSSINESLA
QDKSDLNGLIVQLEEEKNALLSQRREAEQEKLTIRDELVRSEQDRLELDAVRLALHQSLQ
ESELARAGLEAELQSLRADRAKLQDRITQLIGEVGGLEAELSSARGEGDRQSTALEEAGR
GRAELVRERAGLLVQLTASERENAALTEEIAAFRTERESLETSVFELQQQINQIESRCEQ
LESENQSLRLRTDGMMAELKRSRAERETLVSQSEKEKEALRDALTDAHQEAQRCLRSALS
DHQEELEALSQQKEALRCGLEAEQEAALASLRELLEEQTARLEKEREQLQEELRSLQRDR
DRSLLQAESDKQQALSLKEAEKAVLLEKLSALQAERSTAALELERLNRDTALLRDQQRTT
VASLNAELQELRGEQQDAAGAHGRELRRLQESCADQQTRADTALREVEECRALLVSCEES
RDSARRELLELEKRLSQARDAGEGLRREGAELRHSLCDVTKERDALSQSNAQLREALRSA
ESERISVKRVCEEQQQKRSLLDESLASAQTEACDLRSCLREVERSRLEARRELQELRRQL
KVLDAERQQKTKQLSEVQSRLSLDEQKDEERSRELTSLRQRLADAETSRSSLQKELCGLQ
RRLSDSEASRLERERELAAQLQESRGSEKKLQDEARKLCLRAQEACEASAQTQLQLSEAQ
GRLAATEAELSRAEAGRRDLEFRLSSLQSALTRTLGIGAGGRSSSRGRSPAGSSPSSLSS
GRLSRHRSVSPLHCSLSPPKDAAGNVSPDNSALSPERTDAPLPLALQDLDPETLRSGLRD
FLQELRGAQRERDEARGQLGSLQRELEEVTGERDSAHQRLLQLHSTLQESQDDKRALDEK
LSASQALQQQQEESLRRAERDRRALNERIKELERVTLNTESERKRVEEQCSKLRAGEARL
EAERRRLREALEAAEGRGTRVELGRRSLEGELQRLRLSLSERETEIQTLRERHDSALRQV
TEGEARVASLQREVERLAALLSKAQDGEAVQKERALALSQSLQEASAAHSATQGRLAALQ
RTLGQAESERRQLQERVDGLRASVSDGKRNITVLAERVQTLQSELSQSQLRRSELETELQ
NTQEALRQKAESLSEAQRSLQSAQTERASAEERLRSLQRAVALLETEKRDAERQAVRLEK
DKAALRSTLDKVERQKLKTEESSMRLCAEKGRLDRSLSSAEQELQDAQRQIVLLQAQLAE
MEQAHSAGEQALRERDDQRLRDSQREAERTLAARERAHRQRVKGLEEQVFTLKEQLQQEI
RRRTPADLRPETGSRS
NT seq
5991 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagtcggaaaacccgagcgagtctaaactcgaggcggtgattcagaggctggag
gagagcgtcctgtccgaggagaagcggctgacggttcgagggtcttctccagatgaacct
gtgtctagtttaccggcccgtgtgcgagagatcgtctccaggagcctgggtgacggcggt
atgtcgtcgggtctgtctcttcaggacgagaaccgggttcttcaggtagaactgagtcgt
gtggaggatcttctggctcacagtcgagcagaacgagatgaactggccatcaaatacagc
gccatcagcgagagactggagcaggtgctgcatctggagacgggtgaggagggacgcggc
tctccggagtctcgcagtctggcgcagcagaacgtggatctgcgcagacgcctggacgag
gagcaggcggcgtataaacgcaagctcacggcctatcaggaggggcagcagagacaagcg
cagctcgtgcagaaactacaggccaaggtcctgcagtacaagaagaagtgtgcggatctg
gagcagacgctgctggagagatccaccggtcagtgtgacggcagcagtaacggtcagcgg
cgggacgaggacgagccgagcagtgagctggagagcgccctcatccggctggaggaggaa
cagcagaggagcagcggcctgtccgccgtcaacgctatgctgcgggagcagctggagcag
gccgggctggccaatgaggcgctgagccaggacatccgcagactcacggctgattggacc
aaagccagggaggagctggagcagagggagtctgattggaggagagaggaggagtctttc
cacagctacttcagcagcgaacacagccgtctgctggcgctctggaggcaggtggtgggc
ttccgcagacacgtgtgcgagctgaagagcgccaccgagagggatctgagcgagacgcgc
aacgagctggcgagcgtggcgcagagcgtgcagctgcagtgcgtcagcgtctgcgcagat
ctgcgcagtcgtgaggacgggtctgcgctgctgctggagagagagacggcccagaggcag
cagctggagcagcagctcagagagacggtgaccgagatgatgaccctgcaggccaagagc
gactcggagagagccgagctcaacacacggcttgtggatgcagtgagagagctggagcgt
ctcaaagctcgcgtggaggacagagaacaggaagtcataacactccgcaggaaactgcag
gaacagaggagccttgaggagacagaagtccattcactgaaaaaacacactgcagcgctg
cagaacacactccgagacatcacacagatggtgttgtctgacagtgacggtgtggacgga
aacactgaagagtctcttctgccactaatacactcttcatcatcatcatcctcctccatc
cttcctgacagctgtctgtctgctttactctctactctgaccagcagacagatccagcta
caggatcttcgtgagcggctgcagtctgcacagtcttcagtgcagcagctgcgcaggcgg
caggaagaggcggagtcaggccggcgggaggcagagctccgagctcaggcgctgcaggcc
gagagagacgaggctcagagagaaagagagagcacggtgagagagagacaccgactgaga
caggagagagacacactgagcagcgagaaggatgtggcggagaagactgcgcagacggtg
cagacgcagacacagctgctgcagctggagtgtgagcgtctgcagctggcagctccgagc
tcaggcgctgcaggccgagagagacgaggctcagagagaaagagagagagcgtgatcacg
acagctgagacaggagagacggagcggagcagctgagagagagctcagcagctgtgggag
gagtctgagcgccgggcgtcttctctccgagctgaactagcatctctgagagagtctctc
cagcaagagacagcagaccgacagatgatggagaccgagaacagacagctgagtgacaca
ctaaacaggagcgggagcagtcacactgagctctctctagctctctctaagcttcactcg
gaggactcgtctctcagagattctctggttaagatgagcagcatcaatgagagtctggcg
caggacaaatctgacctcaacggcctcatcgtacagctggaggaggagaagaacgctctg
ctgtctcagagaagagaagcggagcaggagaagctgaccatcagagacgagctggtccgc
tccgagcaggaccgactggagctggacgctgtccgtctcgctctccaccaatcgctgcag
gagtctgagctggccagggcggggctggaggcggagcttcagtcgctgcgggccgaccga
gccaaactccaggacaggatcacgcagctgattggtgaggtgggcggcttggaggcggag
ctgagctcggcgcgtggagaaggagacaggcagagcaccgccctcgaggaggcggggcga
gggagggcggagcttgtgcgggagagggcggggcttttggtccagctgacggcgtccgag
agagagaacgccgccctgacggaggagatcgccgccttcaggacggagcgggagagtctg
gagacgagtgtgttcgagctgcagcagcagataaatcagatcgagtctcgatgcgagcag
ctggagtcagagaaccagagcctgagactacgcacagacggcatgatggcggagctgaag
cgttcacgcgccgaacgagagacgctggtgtctcagagcgagaaggagaaggaggcgctg
agggacgctctgacggacgctcatcaggaggctcagcggtgtctgcgctcggctctgtct
gaccaccaggaggagctggaggcgctgagccagcagaaggaggcgctgcgctgcgggctg
gaggcggagcaggaggcggcgctcgcgagtcttcgtgaactcctggaggagcagacggca
cgcctggagaaagagcgcgagcagcttcaggaggagctccgttcccttcagcgtgacaga
gaccgaagtctgctgcaggccgagagcgacaaacagcaggctctgtcgctgaaggaggcg
gagaaggcggttctgttggagaagctgagcgccctgcaggcggagcggagtactgcagcg
ctggagctggagcgactgaaccgagacacggccctgctccgggaccagcagcggaccacg
gtcgcgtctctaaacgcagagctgcaggagctgcgcggtgagcagcaggacgcagccgga
gcacacggccgggagctgcgcagactgcaggagagctgcgcagaccagcagacgcgagcc
gacacggcgctccgagaggtggaggagtgtcgcgcgctgctggtgtcctgcgaggagagt
cgcgactccgccagacgagagctgctggagctggagaaacggctgagccaggcgcgggac
gcgggggaggggctcaggcgagagggggcggagctacgccactccctctgtgacgtcacc
aaggagcgggacgctctcagccaatcaaacgcgcagctgagggaggcgctgagatcggcc
gagagcgagagaatcagcgtgaagcgcgtgtgtgaggagcagcagcagaagcgctctctg
ctggacgagagcctggcgtctgcgcagacggaggcgtgtgatctgcgcagctgtctgcgt
gaggtggagcgctccaggctggaggctcgcagggagctgcaggagctgcgcagacagctc
aaggtcctggacgccgagcgccagcagaagaccaagcagctgagcgaagtacagtctcgt
ctgtcgctggacgagcagaaggacgaggagcgcagccgagaactgacctcactccgacag
aggctcgcagacgctgagaccagcagaagctctcttcagaaggagctgtgtggtctgcag
cggcgtctgagcgacagcgaggcgtctcgactcgagcgggagcgggagctagcggcgcag
ctgcaagagtcccgcggctcggagaagaagctgcaggacgaggctcgtaagctgtgtctg
cgcgctcaggaggcctgcgaggcgtctgcgcagacgcagctgcagctgagcgaggcccag
ggccgcctggctgcgacggaggcggagctatcccgagccgaggcgggccgcagggacctg
gagttcaggctgagcagtctgcagtcggccctcacccggaccctgggcatcggggccggc
gggcggagcagcagcagggggcggagcccggcaggctcctccccttcctcgctcagctca
gggaggctgtctcgtcaccggagcgtgtctccgctgcactgctctctgtcgccacctaaa
gacgcggcgggtaacgtgagtcctgataacagcgcgctgtctccggagaggaccgacgcc
ccgctgcccctcgccctgcaggacctggaccccgagaccctgcgcagcggcctcagagac
ttcctccaggagctccgcggggcccagagagagcgggacgaggcccggggtcagctgggg
tcactgcagagggagctggaggaagtgaccggcgagagagactccgcccaccagcgcctg
ctccagctgcacagcacactgcaggagagtcaggacgataagcgagcgctggacgagaag
ctgtctgcgtctcaagctctgcagcagcagcaggaagagtctctccgaagagcagagcga
gatcgacgagcgctcaacgaacgaatcaaagagctggagagagtgacgctgaacaccgag
agcgagcgcaagcgtgtggaggagcagtgcagcaagctgcgagcgggcgaggctcgtctg
gaggcggagcgtcggaggctgagggaggctctggaggcggctgaggggcggggcacacgg
gtggagctggggaggcggagtctggagggagagctgcagagactgagactgagtctgtcc
gagagagagacggagatccagacgcttcgagagcggcacgacagcgccctcagacaggtg
acggagggcgaggctcgggtggcgtctcttcagcgagaggtggagcggctggcggcgctg
ctgtctaaagctcaggacggagaggccgttcagaaagaacgagcgctcgctctctcacag
agcctgcaggaagccagcgccgcccacagcgccacccaggggcggctcgcagcgctgcag
aggactctgggacaggccgagagcgagcgccggcagctgcaggagcgtgtggatggtctc
cgagcgtccgtgtcggacgggaagcgtaacatcacggtgctagcggagcgcgtgcagacg
ctgcagtcggagctgagccagagccagctgcgcagatctgagctagagacggagctgcaa
aacacacaggaggccctgcgacagaaggccgagagtctgagcgaggcccagcgcagcctg
cagtctgcgcagacggagcgagcgtctgcagaggagcgcctgcgcagcttacagagagcc
gtggccttgctggagaccgagaagagagatgccgagagacaggccgtccggctggagaag
gacaaggcggctctgagaagcactctggataaggtggagcgtcagaagctgaagacggag
gagagcagcatgcgtctgtgtgcggagaaaggtcgtctggatcgatcgctcagctcggcc
gaacaggagctgcaggacgctcagagacagatcgtgctgctgcaggctcagctggcggag
atggagcaggcccacagcgctggagagcaggccctgcgcgagcgagacgaccagcgcctg
cgtgacagccagagggaagcggagcggacgctagcggcccgagagagagcgcaccggcag
cgcgtcaagggtctggaggagcaggtcttcacgctcaaggagcagctccagcaggagatc
cgccgcaggacgccagctgatctcaggcctgaaacaggaagcagatcttaa
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integrated database retrieval system
