Puntigrus tetrazona (Sumatra barb): 122328023
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Entry
122328023 CDS
T08985
Name
(RefSeq) interferon regulatory factor 6-like
KO
K10154
interferon regulatory factor 6
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122328023
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptet04147
]
122328023
Transcription factors [BR:
ptet03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
122328023
Exosome [BR:
ptet04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122328023
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
122328023
NCBI-ProteinID:
XP_043079681
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All DBs
Position
22:1901766..1907032
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AA seq
470 aa
AA seq
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MSSHPRRARLKPWLVSQVDNGVFPGLVWLDREAKRFQIPWKHATRHTPQQEEENTIFKVS
EGPGGVYQEGVDEPDPAKWKAQLRCALNKSREFNLIYDGTKEVPMNPLKIYDVCDIPQTS
SNPGSVPTYETDGDEDDVPDTPEPPPPPYPPHGMSSSPLAPVWASPGPVSPLQPPSCPPP
APPPAEVWPKKEPQDVEMQPPPMEIQTPTPLDAMFATPETWISSLPMTDLEVQFYYRGKE
VCPPVTVSNPQGCRLFYGDLGPIVNQEELFGPVSLEQVRFPSTEHISNDKQRVFTSRLLD
VMDRGLILEVSGHDIYAMRLCQCKVYWSGPCAPNPNTPNLIERQHKVKLFCLESFLSGVI
AHQRGMLSSESPLFDIHLCFGEEWPDGRPRERKLIMVQVVPVVARMISEMFSGDCTRSFD
SGSVRLQISIPDIKDNIVTHLKQLYRLLQTHQGQENWPLPPSMQLPQTQH
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctcaccctcggcgcgcgcggctgaagccctggctcgtgtctcaggtggataac
ggggtgtttccgggtctggtgtggctggaccgcgaggccaagcgctttcagatcccctgg
aaacacgccacgcgccacacgccgcagcaggaggaggagaacaccatcttcaaggtgagc
gaagggccgggaggagtatatcaggaaggcgtggacgagccggatccggccaaatggaaa
gcgcagctgaggtgcgccctgaacaagagccgcgagttcaacctcatctacgacggcacc
aaagaggttcccatgaacccgctgaagatctacgacgtgtgtgacatccctcagacctcc
agcaaccccggctctgttcccacgtatgagacggacggtgatgaagacgacgttcctgac
acccccgagcctcctcctcctccgtatcctcctcacggcatgagctcgtccccgctggcc
ccggtctgggcgtccccgggccccgtgtctccgctgcagccgcccagctgccctcccccc
gcccctcccccggccgaggtgtggcccaagaaagagccgcaggacgtggagatgcagccg
ccgccgatggagatccagacgcccacgccgctggacgccatgttcgccacgcctgagacc
tggatcagctccctgcccatgaccgacctggaggtgcagttctactaccgcgggaaggag
gtgtgtcctccggtgacggtcagtaatcctcagggctgtcgtctgttctacggggatctg
gggcccatcgtcaatcaggaggagctgtttggccccgtgagcctggagcaggtgcgcttc
ccctccaccgagcacatctctaacgacaagcagcgtgtgttcaccagccgcctgctggac
gtgatggaccgaggactcatcctggaggtgagcggacacgacatctacgccatgcgtctc
tgtcagtgtaaggtgtactggtccggcccctgcgctcccaaccccaacacccccaacctg
atcgagcgccagcacaaggtcaagctcttctgcctcgagtccttcctcagcggtgtgatc
gctcaccagcgcggcatgctttcgtctgagtctccgctctttgacattcatctgtgtttc
ggggaggagtggcctgatggcagaccccgagaacgtaaactcatcatggtgcaggtggtg
ccggtggtggcgcggatgatcagcgagatgttctcgggcgactgcacacgctccttcgac
agcggcagtgtgcggctgcagatctctatcccggacatcaaggacaacatcgtgacgcac
ctgaagcagctgtaccggctcctgcagacgcaccagggtcaggagaactggccgctgcct
cccagcatgcagctcccgcagacacagcactga
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