Puntigrus tetrazona (Sumatra barb): 122328220
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Entry
122328220 CDS
T08985
Symbol
capn2l
Name
(RefSeq) calpain 2, (m/II) large subunit, like
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04141
Protein processing in endoplasmic reticulum
ptet04210
Apoptosis
ptet04217
Necroptosis
ptet04218
Cellular senescence
ptet04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122328220 (capn2l)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
122328220 (capn2l)
04217 Necroptosis
122328220 (capn2l)
04218 Cellular senescence
122328220 (capn2l)
09144 Cellular community - eukaryotes
04510 Focal adhesion
122328220 (capn2l)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ptet01002
]
122328220 (capn2l)
Enzymes [BR:
ptet01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
122328220 (capn2l)
Peptidases and inhibitors [BR:
ptet01002
]
Cysteine peptidases
Family C2: calpain family
122328220 (capn2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
CAPN13-like_C_EFh
NRDD
Motif
Other DBs
NCBI-GeneID:
122328220
NCBI-ProteinID:
XP_043079870
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All DBs
Position
22:12722862..12732856
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AA seq
700 aa
AA seq
DB search
MSGIAAKLQQNRARAAGIGTNAQAVKFLNQDYEALKRECLQGGRLFQDDTFEASASALGF
KELGPNSSKVRGVEWLRPKQLTSNPMFISGGASRTDICQGALGDCWLLAAIASLTLNQDV
FARVVPSGQTFDGDYAGIFHFQFWQFGEWVDVVIDDRLPTRNKELLFVHSAEGCEFWSAL
LEKAYAKVNGCYEALSGGSTTEGFEDFTGGIAEVHELAKAGPNLFKIIQKALSWGSLLGC
SIDITDSADSEAITSQKLVKGHAYSVTGAEEVEYRGNLTKLIRIRNPWGQVEWTGAWSDG
SSEWRQISDSEREKLSCKAEDGEFWMSFSDFLRYYSRVEICNLTPDALTDDSVNKWALSK
FDGNWRRGSTAGGCRNYPNSFWMNPQFLIKLEEQDDDPTDNEVGCSFVVGLIQKNRRKMR
KAGEDMHTIGFAIYEVPHEFVGQRNVHLDRNFFVRHASAARSETFINLREVCSRFCLPPG
EYLIVPSTFEPNKDGDFCVRIFSEKQADFQELDDSVACNVPEINVKEGDIDSRFKNLFGQ
LAGADAEISAFELQNILNKVISKRKDIKSDGFSLDTCRNMVNLLDKDGSGKLGIVEFKIL
WTKIELYLDIFCKADKDKSGTMSSTEMREAIGKAGFSLNKALHQIMVARYSDDEFTIDFD
NFVGCIVRLESMFKTFKMLDKDKSGTIELSFFEWLNFSML
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaatcgcagcgaagctccagcagaaccgggcgcgggcagcgggcatcggaacc
aacgctcaagccgtgaaattcctcaaccaggactacgaggcgctcaagcgcgagtgtctg
cagggcggacgcctgtttcaggatgacacgttcgaagcaagcgcatccgcgctcgggttc
aaagaactgggaccaaactcctctaaagtgcgaggggttgagtggctgagaccaaagcaa
ctgacatccaacccaatgtttatcagcggaggagcgtccagaactgacatctgccagggg
gctttgggtgactgttggcttctagctgccatcgcgtctcttaccctcaaccaggacgtg
ttcgctcgtgtggtcccgtctggacagacttttgacggagactacgctggaatatttcat
ttccagttctggcagtttggtgaatgggtggacgtggtcattgacgaccgtcttcctaca
agaaacaaagagctgctgttcgtccactccgccgagggctgcgagttctggagcgccctg
ctggagaaggcctatgcaaaggtgaatggctgctacgaagctctgtctggtggctccacc
accgagggctttgaggacttcactggaggcatcgctgaggtccacgaactagcaaaagca
ggtccaaacctcttcaaaatcatccagaaggctttgagctggggctcgctgctgggctgc
tccatagatatcacagactcagctgattcagaggccattactagtcagaaactggtgaaa
ggacatgcctactcggttacaggagccgaagaggtggaatacaggggcaacttaaccaaa
ctgatccgcatcaggaacccctgggggcaggtggagtggaccggagcctggagcgatggg
tcatcagaatggaggcaaatcagtgacagcgaacgtgagaaactgagctgcaaagcagaa
gatggagagttctggatgtcattctctgatttcctgcgttattactcgcgggtggagatc
tgtaatctgacccctgatgctctgacagatgacagcgttaataagtgggctctgtccaag
tttgatgggaactggaggagaggatcaactgctggaggatgcaggaattacccaaactcg
ttctggatgaaccctcagtttttgatcaagctggaggagcaggacgacgacccgaccgat
aacgaagtaggctgcagcttcgttgtgggtctgatccagaagaaccgccgcaaaatgagg
aaagccggagaggacatgcacaccatcggcttcgccatctacgaggttcctcacgagttt
gtcgggcagaggaacgtccacctggaccgtaacttcttcgtgagacatgcttcagcggcc
cgctctgagaccttcatcaacctgcgcgaggtttgctctcgcttctgtctgcctcccgga
gagtatctcatcgtaccctccaccttcgagcccaacaaggacggagacttctgcgttcgc
atcttctctgagaaacaggcagacttccaagagcttgatgactctgtcgcctgcaacgtt
cctgagattaatgtgaaggagggtgatattgacagccggttcaagaatctgtttggacag
cttgctggggcagatgctgaaatctcagcatttgagctgcaaaatatcctgaacaaagtg
atatctaaacgtaaagacattaaaagtgatggatttagtttggacacttgccgcaacatg
gtgaacttactggataaagacggcagtggaaaactgggcatcgtcgaatttaagattctc
tggactaagattgagctgtacctggacatcttctgtaaagccgacaaggacaagtccggc
acaatgagctccacggagatgagggaagccatagggaaagcaggcttctctttgaacaag
gccctccaccagatcatggtcgcgcgctacagcgacgacgagttcaccatcgactttgac
aactttgtgggctgcattgtgcgccttgagagcatgttcaaaacgtttaaaatgctggac
aaggataagagcggcacgatagagctgagcttttttgagtggctgaatttttccatgctt
tga
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