Puntigrus tetrazona (Sumatra barb): 122328301
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Entry
122328301 CDS
T08985
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122328301
Membrane trafficking [BR:
ptet04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
122328301
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
LRR_LRWD1
LRR_14
Ig_2
LRRNT
LRR_9
V-set
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
122328301
NCBI-ProteinID:
XP_043079887
LinkDB
All DBs
Position
2:22833068..22870972
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AA seq
605 aa
AA seq
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MASLWGLGRLQWLVLVLALTAVQCSGCPPRCDCAAQLRSVSCQRKRLSGVPEGIPTETRL
LDLSRNRLRWVAPGDLAPYPRLEELDLSENLISTLEPNAFASLQALRTLRLRANQLKLVP
MGAFARLANLTTLDLSENKIVILLDYTFQDLRSLKNLEVGDNDLVYISHKAFSGLIGLED
LTIERCNLTSISGQTLSYLRNLVTLRLRHLSISALEDQNFRKLSALRGLEVDSWPYLEYI
SPLSFQGLNLSWLFITNTNISSVPSASFRNLAYLTALNLSYNPISTLESWAFRDLIRLKE
LHMVSTNLLTVEPHALGGLRQIRVLNLSNNDLVTLEESSFHSVNSLETLRVDGNPLSCDC
RLLWILQRRRTLNFDGKMPVCSGPPEVQGYLLSMFTDSALFDYFTCQKPKIRNRKLQQVT
AHEGQPVSFLCRAEGEPTPAIIWISPQRRRITSKSNGRITVLPGGTLEIRYAQVTDSGTY
ICIASNAGGNDTYXATLTVKGQPSDSALFANRSLYAVDFNDTXLNSTRVFLKFTLDLTTI
LVSTAMGCITFLGVVLFCFLLLFVWSRGRGQRKNNFTVEYSFRKTEGPTTTGGSGGTRKF
NMKMI
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcttcattatggggcctgggccggcttcagtggctggttctggtcctggccctgacg
gccgtccagtgctcaggctgccctcctcgctgtgactgcgcggcgcagctccgttccgtg
tcctgccagcgcaagcgtctctccggcgtcccggagggcatcccgacagagaccaggctg
ctggatctgagccggaaccgcctgcgctgggtggccccgggagatctggctccgtacccg
cgactagaggagctggatctgagcgagaacctgatcagcacgctggagcccaacgccttc
gccagcctgcaggctctacggacgctgagactcagagccaaccagctcaagctcgtgccc
atgggagccttcgcacggctggccaacctcaccacactggacctgagcgagaacaagatc
gtcatcctgctcgactacaccttccaagatctgcgcagtcttaagaacctggaggtgggg
gacaatgacctggtctacatctctcacaaggctttctcaggattgatcggtctggaagat
ctgaccattgagaggtgcaacctgacgtccatatcgggccagactctgtcttacctgcgt
aacctggtcacccttcgcctgcgacacctcagcatctcagcccttgaggaccagaacttc
cgcaagctgtctgcgctgagaggcctggaggtggacagctggccgtacctggagtacatc
tcaccgctgagcttccagggtcttaatctgtcctggctctttatcaccaacaccaacatc
agttcggtgccgtcagcctccttcaggaacctggcctacctgacggccctgaacctttcc
tacaatcccatctctactctcgagtcctgggcctttcgagacctcatcagactgaaggag
ctgcacatggtcagcactaacctgctcaccgtggagcctcacgcactgggaggtctgcgt
cagattcgagtcttgaacctgtccaacaacgatctggtgacgctggaggagagctccttc
cactcggtcaacagcctggagacgcttcgagtggacgggaacccactgtcctgcgactgt
cgtctgctgtggatcctgcagcgcagacgcaccctgaacttcgacgggaagatgccggtg
tgctccggaccgccggaggtgcagggatacctgttgagcatgttcaccgattccgcattg
ttcgactacttcacctgccagaagcccaagatccgtaatcggaagctgcagcaggtgacg
gctcacgaaggccagccggtgtcgttcctgtgccgagccgaaggcgagccgactccggcc
atcatctggatctccccgcagagacggaggatcacttccaagagcaacggcaggatcaca
gttctccccggcgggacgctggagatccgatacgcgcaggtgacggacagcggcacgtac
atctgcatcgccagcaacgcgggcggaaacgacacctacnccgccacgctgaccgtcaag
ggccagccgtcggattcggctctcttcgccaaccgctcgctgtacgcggtggacttcaac
gacacgnggctcaacagcacgcgcgttttcctcaagttcacgctggatttgaccaccatc
ctggtgtccacggccatgggctgcatcactttcctgggcgtggtgctcttctgcttcctg
ctgctgttcgtgtggagccgcggacgaggacagcgcaagaacaacttcacggtggagtac
tccttcaggaagaccgagggacccaccaccaccggcggatccggaggaacccgcaagttc
aacatgaagatgatatga
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