Puntigrus tetrazona (Sumatra barb): 122328360
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Entry
122328360 CDS
T08985
Symbol
nfascb
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122328360 (nfascb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ptet04515
]
122328360 (nfascb)
Cell adhesion molecules [BR:
ptet04515
]
Immunoglobulin superfamily
L1 family
122328360 (nfascb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
Bravo_FIGEY
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_5
A9CJY8-like_N
Syndecan
DUF3792
Motif
Other DBs
NCBI-GeneID:
122328360
NCBI-ProteinID:
XP_043079947
LinkDB
All DBs
Position
23:11085866..11098542
Genome browser
AA seq
1173 aa
AA seq
DB search
MRALKCWRIPAILTILQQAWILAMEIPPDVRQPPMIFKESPQDYIVDPVDPIIVECEATG
NPPPVFTWTRDGVYLNVARDPQVSMRWRSGTLEIFFWGRPDDYEGVYQCTATNEFGSALS
SYINLRVSKSRTWLKEYLEPVSVVVGLPLILPCNPPVGPPKPDTYWLNSTMAPIRQDRRV
SKAENGDLYFSSIVAEDALTNYVCVARFPFTNTIQQKPPLILQVLTARMAAHTAPKFLKP
KGTASTTIAMLGEELILECFAAGVPTPFIKWTKDWDEMSMTGKKLENFNKTLRIKNVSMD
DGGDYICSASNRMGSLDHVITVRVKSVPFWVEKPESLVLSRDDSGSIVCRADGIPRPQIQ
WLVNGEPISDAPKSPGRQVSGDTLTFRAVVPDSAAVFQCNASNQYGYIMANAFLAVMDMR
PRLLGPKDELIKTTEGNNTHLDCPYFGSPKPDLRWSKGGLGTLEGGRHRILPNGTLEITN
TKLQDQGSYVCVASNVIGRDEKDVQLEVKEPIKIVRVPHNTVVIRGSLARFDCKIKFDPT
LEVTVTWLKDKKFLILGRRMTKDEDSLSIADVYRRDEGIYSCRVKSELEEVIASAKLTVM
DRPDPPSDLEISDPSERSVRLTWVPGLSNHSPIKEYLVQYTEDLLADYWLLPSGWKNLSS
YPGNLNSVVLQLTPFVEYRFRVIAVNGIGPSKPSWASEYYQTGGAVPDAIPRNIQGMGSG
VFRNNMEISWEPLEYREWNGPKLGYMVWWRRRDSREEWKNYTTYWWCSYIIYDTDTFTPY
EIKVQAVNFFGYGPESPVMIGYSGEDRPVAAPSDLRVSDIESSTLTVHWEPVSRADIMGE
IKEYKVYYWRESSRLPWHVVSRRIKTKSFKANGPRLSGTLTGLVPYSNYRIYIVVANNRY
EGPPSNTIEFQTPEGVPSIPRSFRIMHRHYDTIYLDWEEPAEPNGILTGYILKYQTLNIT
LSDRIQVEYIPPNITYFSLRRFDRYTRYKFSLAAQTELGVGEAFTEESPHFTTEEHTRDQ
VDIVTQGWFIGLMCAIALLVLIMLIVFFIKRSRGGKYPVRDKRDFAMEPLDDRENGTFDY
RSLERITRVSTMPYTRREEESRQGRSQGAIQHIDRRTNSDDSLMEYGEGEEIEFNEDGSF
IGEYTGVNKRNMDKSPYHDSSEPTSPVAIYSFA
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgagagctctgaagtgttggaggattcctgccatacttactatcctacagcaagcatgg
attttagccatggaaattcctcctgatgtcaggcagcctccaatgatctttaaagagagt
cctcaagactacatagtagatccagttgaccctattatagtggagtgtgaagcaacgggg
aatccacctccagtcttcacatggacacgtgacggagtgtacctgaatgtggctcgagac
cctcaggtcagcatgaggtggcgttctggcacattagagattttcttctggggtcgtcct
gatgactacgagggtgtctatcagtgcacggcgactaatgagtttggctctgctttgtcc
agttacattaatctgcgtgtctccaagtcccgtacgtggttgaaggagtatctggagcca
gtctcagtggtggttggacttcctctcatccttccctgcaatcctcctgtaggtcctcca
aaacctgacacttactggctgaacagcaccatggcaccaatccgtcaagaccgtcgagta
tcgaaggctgaaaatggagatctgtacttctccagtatcgtagcagaagatgctcttaca
aactatgtgtgtgtcgcacgcttccccttcacaaacaccatccagcagaaaccaccgctc
attctgcaggtgcttacagctcgcatggcagcccatacagcacccaagtttctgaaaccc
aaaggaaccgcaagcacaaccattgcgatgctgggtgaagagcttattttggagtgtttt
gctgctggagttccaactcccttcatcaaatggactaaagattgggatgagatgtccatg
acaggaaagaagttggaaaattttaataagacacttagaataaagaacgtctccatggat
gatggaggagactacatctgcagcgcttcaaacaggatgggcagcctggaccacgtcatc
actgtcagggtcaaatcggttccattctgggtggagaagcctgagagtctggttttgtct
cgtgatgatagcggtagtatagtgtgtagagctgatggcattcctcgaccccagatacag
tggctggttaatggagagccaatcagtgatgctcctaagagtccaggcagacaggtttca
ggagacacactgacgttcagggctgtggttccagacagcgctgctgtgttccagtgcaat
gcttcaaaccagtacggctatatcatggcaaacgctttcttggctgtaatggatatgaga
cctcgcctgttaggtcccaaagatgaactcattaaaacaactgaaggcaataacactcat
ctagactgcccatattttgggtccccgaaacctgacctgcgttggtcaaaaggaggacta
ggtaccttagagggaggtcgtcataggattcttccaaatggtacattggaaatcacaaat
acaaagctacaagatcagggaagctatgtgtgtgtggcaagcaacgtcattggacgagac
gagaaggacgtccagctagaggtcaaagagcccattaaaatcgtccgtgtcccacacaat
actgtagtcataagaggaagcctggctcgctttgattgtaagattaaatttgacccgact
ctggaagtcaccgttacttggcttaaagacaagaagttcttgatcttaggaaggaggatg
acaaaggatgaggattctctgagcattgctgatgtgtacagaagagatgaaggcatctac
tcctgcagggtgaaaagtgaactggaggaggtcatagcttcagccaaactcactgtgatg
gatcgtccagatcctcccagcgacctagagatatcagacccgtcagagaggagcgttaga
ctcacctgggtaccaggactgagcaaccacagccccattaaagagtacctggttcaatat
accgaagatcttcttgcagactattggctgctgccaagcggctggaagaacctgtccagc
taccccgggaacctaaactctgtcgtattacagctgacaccatttgtagagtacagattc
cgggtcatcgctgtaaacggtataggtcccagtaaacccagctgggcatctgaatactac
cagacaggaggagcagtgcctgatgccatcccaagaaacatccaaggaatgggaagtgga
gtgttcagaaataacatggagatcagctgggagccactggagtacagagaatggaatggg
ccgaaactgggctacatggtttggtggagacgaagggattcaagggaggagtggaagaac
tacacaacatactggtggtgtagctacatcatatatgacacagacaccttcacaccctac
gagattaaagttcaggccgtcaacttcttcggctatggcccagaatcccctgttatgatc
ggctactccggggaggaccgtcctgttgccgctccatctgacctgagagtgtcggacatc
gagagctcaacgctgacggtccattgggaaccagtgtcacgagctgacatcatgggtgaa
ataaaggagtacaaagtttattattggagagagagcagtcgtctgccctggcacgttgtg
agcaggaggattaagaccaagagttttaaagctaatggacctcgtctgtctgggactctg
actggtcttgtcccgtacagtaactacaggatttatattgtagtggccaataatcgctat
gagggtccgcccagcaacaccattgagtttcagacacccgaaggagtgccctcgattccc
agatcgtttagaataatgcaccgacactatgacactatttacctggactgggaagagcct
gcagaacccaatggcattctgaccggatatattctcaaatatcagactttgaacatcact
ctgagtgacagaatccaggttgaatacattcctccgaacatcacctacttctccctgcgg
cgatttgaccgctacactcgatacaagttctcactggcagcacaaaccgagcttggagtc
ggggaggcgttcacagaggaatcaccccattttacaactgaggaacatacccgagatcaa
gtggacattgtgacgcagggctggttcattggcttaatgtgtgccatcgctctcctcgtt
cttatcatgctcatagtctttttcatcaagcggagccgaggtggaaagtacccagtgcgg
gacaagagggactttgcaatggagccactggatgatagagagaatggaacgtttgattac
aggtctcttgagaggataacacgagtttccacaatgccctataccagacgtgaggaagaa
agtcgccagggacgcagtcagggtgcgatccagcacatcgacaggagaacgaacagtgac
gacagcctcatggagtacggtgagggcgaggagatcgagtttaacgaggacggctctttc
atcggcgagtacacaggcgtcaataagaggaacatggacaagagcccgtaccacgacagc
tctgagcctacgtctccggtcgccatctactcgtttgcttag
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