Puntigrus tetrazona (Sumatra barb): 122328370
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Entry
122328370 CDS
T08985
Symbol
exosc10
Name
(RefSeq) exosome component 10 isoform X1
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122328370 (exosc10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122328370 (exosc10)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
122328370 (exosc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
122328370
NCBI-ProteinID:
XP_043079970
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All DBs
Position
23:5083544..5093170
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AA seq
895 aa
AA seq
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MAASSSSASAVKQSDHSSQSEETEEEAEFCPGFKDVDAFVKHGLGAVVSATKASAALPAA
GDEFDLYRSFPAFQQFCASQGDQLLHCMSQIMQHHGCRSHMRDRNRLTGLEDRFDLVVDA
NDAILEKVGILLDEASGVSSTQQPVMPAGYQPPKIVVSSWNRKGGESREKTFHLLHAKNI
QRPQLKFKDKVNNSNTPFVSKIFIKPNAVKPLPSYFTNKHIRKERPEDLDVPAALADFIH
QQRTKEHVDDMFSHPYQYELNHLVMPESLKCKPDVQLYKPLAESTCQFINTLDDLVALNE
KLAKTSEFAVDLEHHSYRSFLGITCLMQISTREEDFIIDTLELRSEMYILNETFTDPAIV
KVFHGADSDIEWLQKDFGLYVVNMFDTHHAARGLNLGRNSLDHLLKVYCNENADKRYQLA
DWRIRPLPTEMLKYAQADTHYLLYVYDRVRADLYDAGNGQPTLVQQVWDRSRDLSLKKYV
KPIFTEDLYLELYRKQKKNFNTQQMAAFRLLYGWRDKLAREEDESTGYVLPNHMMMKIAE
VLPKEPQGIIACCNPTPPLVRQQINELHRLVKQARETPLLKAEEKKKSMTPKRKPQTTLF
GPHDTSRSSESDFLDLSSFETPTKPGVLFSEEDESVNQEEESSHGLIASAKISLFEEDAA
AAPAHLTVAQQKAHSIMESFENPFRMYLPSKDIHISKNAKYDPSSKIYEIHNRWKLQSIE
QQQKEAEEKRQAKEQAKKARDERKKAKLSYQESVQNVPTVRQQAAKAKQTGQKRERAASD
AAEESLKPKIKVSKTESDTSVAEQSTKPAQKKKKQKKVQEPQLPEEDFKPFDYSRSNFKI
FDGKTKKSSQFDPNRQTHGPKQKKKGQKKNTVGGRSMSYVPTTSDRGFRHNWPKR
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcctcgagcagcgcgtccgctgttaaacagagcgaccattcttcacagtcc
gaggaaacggaggaagaagccgagttttgcccgggttttaaggatgtcgacgcttttgtc
aagcacggtctgggagcggtggtctctgccacgaaggcgtccgcagctcttccggcggcc
ggggatgagtttgatctgtaccgcagcttccctgccttccagcagttctgcgcttcacag
ggagaccagctcctccactgtatgagccagatcatgcagcatcatggctgtaggtctcac
atgagagacaggaacagactgactggactggaggacaggtttgacctggtggtggacgca
aacgatgccatccttgagaaagtgggcattctcctggacgaggcctccggtgtgagctcc
acccagcagccggtgatgcctgcaggatatcagccgccgaagatcgtcgtgtccagctgg
aatcgcaagggaggagagagcagggagaagacctttcacctcctacatgctaaaaacatt
cagcggccgcagctcaagttcaaggacaaagtgaataacagcaacactccgtttgtctcc
aaaatcttcatcaaacccaatgcagtcaaacctctgccatcatatttcaccaacaaacac
attcgtaaggagagaccggaggatttggatgttcctgctgcgctggctgatttcatccat
cagcagagaacgaaagagcacgtggacgacatgttctctcacccctatcagtatgaactg
aatcacctggtgatgccggagagtctgaagtgtaaacccgacgtccagctgtataaacct
cttgccgagtccacctgtcagtttatcaacactttagatgacctggttgctttgaatgag
aagttagcgaagacgtcggagttcgctgtggacctggagcatcactcctacaggagcttt
ctgggaatcacgtgtctgatgcagatatcaacacgagaggaggatttcatcatagacacg
ctggaactgcgcagtgaaatgtacatcttaaacgagaccttcactgaccctgccattgtg
aaggtgtttcacggcgctgactcggacatcgagtggctacaaaaagactttggtctttac
gtggtcaacatgttcgacacccatcatgctgcgcgcggtctaaacctcggccgaaactcc
ctggaccatctcctgaaagtctactgcaatgagaacgctgataaacgctaccagctggca
gactggaggatacgaccgctgccgactgagatgttgaagtacgctcaggctgacactcac
tatctgctgtacgtgtacgaccgcgtccgtgctgacctctacgatgcaggcaacggccag
cccaccctcgtccagcaggtctgggacagaagcagagacctctcgctcaagaaatacgtg
aagcctatttttacggaggacttgtacttagagctgtaccgcaagcagaagaagaacttc
aacacacagcagatggcggccttcagactgctgtacggctggagagataaactggcccga
gaggaagatgagagcacgggatatgtcttgccaaaccacatgatgatgaagatcgctgaa
gtacttcccaaggagcctcagggcatcatcgcctgctgtaaccccactccaccgctggtg
cggcagcagatcaacgagcttcaccggctcgtcaaacaggctcgagagactccgctcctc
aaggctgaggagaagaagaaatcgatgacccctaaaagaaagccacagaccactttattc
ggaccgcatgacacctcccgctcgtctgaaagcgatttcttagacctctcttcttttgaa
actccaaccaaaccgggagttttgttttcagaggaggatgaaagcgtgaaccaagaggaa
gaatcctcgcacggcctgatagcttcagcaaaaatcagcctctttgaggaggacgcagca
gcagctccagctcatctgactgtggcacaacagaaagctcacagcatcatggagtcgttc
gagaaccccttcagaatgtatttaccatcaaaggacattcacatttccaagaatgccaag
tacgacccttcttcaaagatttatgagattcacaaccgctggaagttacagagtattgag
cagcagcagaaggaggcggaggagaaacgacaggctaaagaacaggccaagaaagctcga
gatgaacgaaagaaagccaaactgagctaccaggagtctgtgcaaaacgttcccactgtc
cggcagcaagcagcgaaagcaaagcaaactggacagaaaagagagagagctgccagcgat
gctgctgaagagagtcttaaaccaaagattaaagtctcaaagactgaaagtgacacgtcg
gtggccgagcagtcgacaaaacctgctcagaaaaaaaagaaacagaaaaaagttcaagag
cctcaacttcctgaagaagactttaaaccttttgactacagccggtcaaattttaaaata
tttgatggcaaaacgaagaagagttcacagtttgatccaaacagacagacacatggaccc
aagcagaagaaaaaaggacagaagaaaaacactgtgggaggcaggagcatgtcttatgtg
cctaccacatctgacagagggtttcgccacaactggcccaagagataa
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