Puntigrus tetrazona (Sumatra barb): 122328420
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Entry
122328420 CDS
T08985
Symbol
rxrga
Name
(RefSeq) retinoic acid receptor RXR-gamma-A
KO
K08524
retinoid X receptor alpha
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03320
PPAR signaling pathway
ptet04148
Efferocytosis
ptet04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122328420 (rxrga)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
122328420 (rxrga)
03320 PPAR signaling pathway
122328420 (rxrga)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122328420 (rxrga)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ptet03310
]
122328420 (rxrga)
Transcription factors [BR:
ptet03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
122328420 (rxrga)
Nuclear receptors [BR:
ptet03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
122328420 (rxrga)
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
122328420
NCBI-ProteinID:
XP_043080050
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Position
2:9658386..9672517
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AA seq
441 aa
AA seq
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MDNNDTYLHLSSSLQVTHGHLSSPPSQPPLSSMVSHHHPSIINGLGSPYSVITSSSLGSP
SASLPTTSNMGYGALNSPQMNSMNSVSSSEDIKPPPGLAGLGSYSCGSPGSLSKHICAIC
GDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDNKDCQIDKRQRNRCQYCRYQKCLAM
GMKREAVQEERQRGREKSDNEVECSSSFNEEMPVEKILDAELAVEPKTEAYMESSTGNST
NDPVTNICQAADKQLFTLVEWAKRIPHFSDLPLDDQVILLRAGWNELLIASFSHRSVTVK
DGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKTELGCLRAIVLFNPDAK
GLSNPSEVEALREKVYASLEGYTKHNYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKL
IGDTPIDTFLMEMLEAPHQIT
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggataataacgacacgtatctgcatcttagttcttctttgcaggtaacacacggccac
ctgagctctcctccgtcccagcctcctctcagctccatggtgtcccaccatcacccctcc
atcatcaacggtctagggtcgccgtactcagtcatcacttcctcctctctgggctcacct
tcagcctccttgcccaccacatccaacatgggctatggagcactcaacagtccacagatg
aactccatgaacagtgttagcagctcagaagacattaaacctcctccaggactggcagga
ctgggcagttactcctgcggcagcccggggtccctctccaaacacatctgtgccatctgt
ggagaccgatcctcagggaaacattatggtgtttacagctgtgaaggatgcaagggcttc
ttcaagagaactatccggaaagacctcacgtacacgtgccgagacaataaagactgccag
attgacaaacgccagcgtaaccgctgccagtactgccgctatcagaagtgtctggccatg
ggcatgaagagagaagcggtgcaggaagagaggcagcggggtcgggaaaagagtgacaac
gaggtggagtgtagcagcagctttaatgaagaaatgccagtggagaagattttggacgct
gagctcgcagtggaacccaagactgaggcttacatggagtccagcacgggcaactcgaca
aatgacccagtgaccaacatctgccaggcagcagacaagcagctctttactcttgttgag
tgggctaagagaatcccgcacttctctgaccttcctctggatgaccaggtcatcctgctg
cgagcgggttggaacgagctgctcatcgcttcgttctcccaccgttctgtgacggttaag
gacgggatcctcctggccaccggcctgcacgtccaccgcagcagcgctcacagcgcaggg
gtcggctctatatttgacagggtattaacagagctggtctctaagatgaaggacatgcag
atggacaagacagagctgggctgtttaagagctatcgtcctctttaaccctgatgcaaaa
ggattgtcaaacccatcagaggtcgaggcattacgggaaaaagtgtacgcttcactggag
ggctacaccaaacacaattaccccgatcaacccggcaggtttgcgaagctgctcctccgt
ctgcccgctctgcgctccataggactgaagtgcctggagcatctgttcttcttcaaactc
ataggagacacacctatagacactttcctcatggagatgctggaagcgccgcatcaaatc
acatga
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